RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 PRO0255Q9UI72 69 aa9.77□□□□□ -0.85
NPHP4-203ENST00000378169 ADGRG4Q8IZF6 3080 aa9.77□□□□□ -0.85
NPHP4-203ENST00000378169 IGHV1-58A0A0C4DH39 117 aa9.77□□□□□ -0.85
NPHP4-203ENST00000378169 GAGE12HA6NDE8 117 aa9.77□□□□□ -0.85
NPHP4-203ENST00000378169 OVOL2Q9BRP0 275 aa9.77□□□□□ -0.85
NPHP4-203ENST00000378169 KLK12Q9UKR0 248 aa9.76□□□□□ -0.85
NPHP4-203ENST00000378169 CFAP46Q8IYW2 2715 aa9.76□□□□□ -0.85
NPHP4-203ENST00000378169 FAM222AQ5U5X8 452 aa9.76□□□□□ -0.85
NPHP4-203ENST00000378169 CFAP126Q5VTH2 177 aa9.76□□□□□ -0.85
NPHP4-203ENST00000378169 MGAM2Q2M2H8 2515 aa9.76□□□□□ -0.85
NPHP4-203ENST00000378169 LOC400499M0QZD8 3231 aa9.76□□□□□ -0.85
NPHP4-203ENST00000378169 IGLV4-3A0A075B6K6 122 aa9.76□□□□□ -0.85
NPHP4-203ENST00000378169 HERV-K104P63124 156 aa9.75□□□□□ -0.85
NPHP4-203ENST00000378169 ICOSQ9Y6W8 199 aa9.75□□□□□ -0.85
NPHP4-203ENST00000378169 COX7A2LO14548 114 aa9.75□□□□□ -0.85
NPHP4-203ENST00000378169 COX7B2Q8TF08 81 aa9.75□□□□□ -0.85
NPHP4-203ENST00000378169 ATRQ13535 2644 aa9.75□□□□□ -0.85
NPHP4-203ENST00000378169 TINCRA0A1B0GVN0 87 aa9.75□□□□□ -0.85
NPHP4-203ENST00000378169 IFITM1P13164 125 aa9.75□□□□□ -0.85
NPHP4-203ENST00000378169 LY6G6DO95868 133 aa9.74□□□□□ -0.85
NPHP4-203ENST00000378169 CRYGDP07320 174 aa9.74□□□□□ -0.85
NPHP4-203ENST00000378169 C1orf43Q9BWL3 253 aa9.74□□□□□ -0.85
NPHP4-203ENST00000378169 CNFNQ9BYD5 112 aa9.74□□□□□ -0.85
NPHP4-203ENST00000378169 TRBV27A0A0K0K1C4 114 aa9.74□□□□□ -0.85
NPHP4-203ENST00000378169 INSL3P51460 131 aa9.74□□□□□ -0.85
NPHP4-203ENST00000378169 Q8N976 141 aa9.74□□□□□ -0.85
NPHP4-203ENST00000378169 NKAPP1Q8N9T2 125 aa9.74□□□□□ -0.85
NPHP4-203ENST00000378169 PTH2Q96A98 100 aa9.74□□□□□ -0.85
NPHP4-203ENST00000378169 ZNF22P17026 224 aaPredicted RBP9.74□□□□□ -0.85
NPHP4-203ENST00000378169 RS1O15537 224 aa9.73□□□□□ -0.85
NPHP4-203ENST00000378169 INAFM2P0DMQ5 153 aa9.73□□□□□ -0.85
NPHP4-203ENST00000378169 MIR7-3HGQ8N6C7 128 aa9.73□□□□□ -0.85
NPHP4-203ENST00000378169 DMXL2Q8TDJ6 3036 aa9.73□□□□□ -0.85
NPHP4-203ENST00000378169 TRAV26-1A0A087WT03 109 aa9.73□□□□□ -0.85
NPHP4-203ENST00000378169 PTPRBP23467 1997 aa9.73□□□□□ -0.85
NPHP4-203ENST00000378169 A8MZ25 164 aa9.73□□□□□ -0.85
NPHP4-203ENST00000378169 NDUFA11Q86Y39 141 aa9.73□□□□□ -0.85
NPHP4-203ENST00000378169 CFAP47Q6ZTR5 3102 aa9.73□□□□□ -0.85
NPHP4-203ENST00000378169 MAST4O15021 2626 aa9.73□□□□□ -0.85
NPHP4-203ENST00000378169 SOCS3O14543 225 aa9.72□□□□□ -0.85
NPHP4-203ENST00000378169 DMDP11532 3685 aa9.72□□□□□ -0.85
NPHP4-203ENST00000378169 MUC4Q99102 2169 aa9.72□□□□□ -0.85
NPHP4-203ENST00000378169 POLR2KP53803 58 aaKnown RBP9.72□□□□□ -0.85
NPHP4-203ENST00000378169 BAALC-AS2P0C853 105 aa9.71□□□□□ -0.85
NPHP4-203ENST00000378169 ANKRD29Q8N6D5 301 aa9.71□□□□□ -0.85
NPHP4-203ENST00000378169 CAMK2N2Q96S95 79 aa9.71□□□□□ -0.85
NPHP4-203ENST00000378169 FLNAP21333 2647 aaKnown RBP9.71□□□□□ -0.85
NPHP4-203ENST00000378169 IGHV4-4A0A075B6R2 117 aa9.71□□□□□ -0.85
NPHP4-203ENST00000378169 A0A0J9YXY3 114 aa9.71□□□□□ -0.85
NPHP4-203ENST00000378169 ZMAT4Q9H898 229 aa9.71□□□□□ -0.85
NPHP4-203ENST00000378169 LINC01620Q4KN68 170 aa9.71□□□□□ -0.86
NPHP4-203ENST00000378169 NFE4Q86UQ8 179 aa9.71□□□□□ -0.86
NPHP4-203ENST00000378169 CLEC2BQ92478 149 aa9.71□□□□□ -0.86
NPHP4-203ENST00000378169 ODF3L2Q3SX64 289 aa9.7□□□□□ -0.86
NPHP4-203ENST00000378169 C2orf91Q6ZV80 131 aa9.7□□□□□ -0.86
NPHP4-203ENST00000378169 CRIP2P52943 208 aaPredicted RBP9.7□□□□□ -0.86
NPHP4-203ENST00000378169 C9orf85Q96MD7 179 aa9.7□□□□□ -0.86
NPHP4-203ENST00000378169 TSHBP01222 138 aa9.69□□□□□ -0.86
NPHP4-203ENST00000378169 HILS1P60008 231 aa9.69□□□□□ -0.86
NPHP4-203ENST00000378169 TRBV6-5A0A0K0K1A5 114 aa9.69□□□□□ -0.86
NPHP4-203ENST00000378169 PLA2G2AP14555 144 aa9.69□□□□□ -0.86
NPHP4-203ENST00000378169 LOC100131303A0A0U1RQF7 123 aa9.68□□□□□ -0.86
NPHP4-203ENST00000378169 LINC00269Q8N2A0 174 aa9.68□□□□□ -0.86
NPHP4-203ENST00000378169 FAM110AQ9BQ89 295 aa9.68□□□□□ -0.86
NPHP4-203ENST00000378169 SPAG11BQ08648 103 aa9.68□□□□□ -0.86
NPHP4-203ENST00000378169 ITPR3Q14573 2671 aa9.68□□□□□ -0.86
NPHP4-203ENST00000378169 HAMPP81172 84 aa9.67□□□□□ -0.86
NPHP4-203ENST00000378169 TEN1Q86WV5 123 aa9.67□□□□□ -0.86
NPHP4-203ENST00000378169 TM2D2Q9BX73 214 aa9.67□□□□□ -0.86
NPHP4-203ENST00000378169 DMXL1Q9Y485 3027 aa9.67□□□□□ -0.86
NPHP4-203ENST00000378169 HELZ2Q9BYK8 2649 aaKnown RBP9.66□□□□□ -0.86
NPHP4-203ENST00000378169 A0A096LNJ9 63 aa9.66□□□□□ -0.86
NPHP4-203ENST00000378169 C15orf53Q8NAA6 179 aa9.66□□□□□ -0.86
NPHP4-203ENST00000378169 TMEM223A0PJW6 202 aa9.66□□□□□ -0.86
NPHP4-203ENST00000378169 CCL18P55774 89 aa9.65□□□□□ -0.86
NPHP4-203ENST00000378169 WDFY3Q8IZQ1 3526 aa9.65□□□□□ -0.86
NPHP4-203ENST00000378169 ATMQ13315 3056 aa9.65□□□□□ -0.86
NPHP4-203ENST00000378169 F8WEM9 126 aa9.65□□□□□ -0.86
NPHP4-203ENST00000378169 MIAQ16674 131 aa9.65□□□□□ -0.86
NPHP4-203ENST00000378169 TCL1BO95988 128 aa9.64□□□□□ -0.87
NPHP4-203ENST00000378169 LECT2O14960 151 aa9.64□□□□□ -0.87
NPHP4-203ENST00000378169 ZZEF1O43149 2961 aa9.64□□□□□ -0.87
NPHP4-203ENST00000378169 TRBV6-8A0A0A6YYG3 113 aa9.64□□□□□ -0.87
NPHP4-203ENST00000378169 RPL18AQ02543 176 aaKnown RBP9.64□□□□□ -0.87
NPHP4-203ENST00000378169 PIK3CD-AS1Q5SR53 167 aa9.64□□□□□ -0.87
NPHP4-203ENST00000378169 COX8CQ7Z4L0 72 aa9.64□□□□□ -0.87
NPHP4-203ENST00000378169 NCR3O14931 201 aa9.63□□□□□ -0.87
NPHP4-203ENST00000378169 DEFB105AQ8NG35 78 aa9.63□□□□□ -0.87
NPHP4-203ENST00000378169 RMI2Q96E14 147 aa9.63□□□□□ -0.87
NPHP4-203ENST00000378169 CRYBA4P53673 196 aa9.63□□□□□ -0.87
NPHP4-203ENST00000378169 TRBV6-4A0A1B0GX49 114 aa9.62□□□□□ -0.87
NPHP4-203ENST00000378169 REG3AQ06141 175 aa9.62□□□□□ -0.87
NPHP4-203ENST00000378169 UBL5Q9BZL1 73 aa9.62□□□□□ -0.87
NPHP4-203ENST00000378169 HIGD2BQ4VC39 106 aa9.62□□□□□ -0.87
NPHP4-203ENST00000378169 FOXI1Q12951 378 aa9.62□□□□□ -0.87
NPHP4-203ENST00000378169 TMEM126AQ9H061 195 aa9.62□□□□□ -0.87
NPHP4-203ENST00000378169 ORMDL1Q9P0S3 153 aa9.62□□□□□ -0.87
NPHP4-203ENST00000378169 NDUFA7O95182 113 aa9.61□□□□□ -0.87
NPHP4-203ENST00000378169 IGIPA6NJ69 53 aa9.61□□□□□ -0.87
NPHP4-203ENST00000378169 NDUFA1O15239 70 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms