RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 BEAN1Q3B7T3 259 aa11.89□□□□□ -0.51
TRIM39-201ENST00000376656 IMUPQ9GZP8 106 aa11.89□□□□□ -0.51
TRIM39-201ENST00000376656 ATP5J2P56134 94 aa11.89□□□□□ -0.51
TRIM39-201ENST00000376656 C22orf24Q9Y442 160 aa11.88□□□□□ -0.51
TRIM39-201ENST00000376656 FAM218AQ96MZ4 157 aa11.88□□□□□ -0.51
TRIM39-201ENST00000376656 BAALC-AS2P0C853 105 aa11.88□□□□□ -0.51
TRIM39-201ENST00000376656 LINC00643Q86TS7 51 aa11.88□□□□□ -0.51
TRIM39-201ENST00000376656 TMEM126AQ9H061 195 aa11.88□□□□□ -0.51
TRIM39-201ENST00000376656 DEFB112Q30KQ8 113 aa11.87□□□□□ -0.51
TRIM39-201ENST00000376656 DNAJC30Q96LL9 226 aa11.87□□□□□ -0.51
TRIM39-201ENST00000376656 SMIM1B2RUZ4 78 aa11.87□□□□□ -0.51
TRIM39-201ENST00000376656 LINC00694P0DN24 101 aa11.87□□□□□ -0.51
TRIM39-201ENST00000376656 HERVK_113P63121 156 aa11.87□□□□□ -0.51
TRIM39-201ENST00000376656 C11orf72Q8NBR9 251 aa11.86□□□□□ -0.51
TRIM39-201ENST00000376656 TMEM89A2RUT3 159 aa11.86□□□□□ -0.51
TRIM39-201ENST00000376656 UCNP55089 124 aa11.86□□□□□ -0.51
TRIM39-201ENST00000376656 PIK3CD-AS1Q5SR53 167 aa11.86□□□□□ -0.51
TRIM39-201ENST00000376656 PRIMA1Q86XR5 153 aa11.86□□□□□ -0.51
TRIM39-201ENST00000376656 CCL19Q99731 98 aa11.86□□□□□ -0.51
TRIM39-201ENST00000376656 TRACP01848 142 aa11.85□□□□□ -0.51
TRIM39-201ENST00000376656 LY6DQ14210 128 aa11.85□□□□□ -0.51
TRIM39-201ENST00000376656 TRAV13-1A0A0B4J241 112 aa11.85□□□□□ -0.51
TRIM39-201ENST00000376656 A8MTW9 85 aa11.85□□□□□ -0.51
TRIM39-201ENST00000376656 SLURP1P55000 103 aa11.84□□□□□ -0.51
TRIM39-201ENST00000376656 DEFB136Q30KP8 78 aa11.84□□□□□ -0.51
TRIM39-201ENST00000376656 PRORYQ9H606 182 aa11.84□□□□□ -0.51
TRIM39-201ENST00000376656 C9orf153Q5TBE3 101 aa11.83□□□□□ -0.52
TRIM39-201ENST00000376656 SDIM1Q6ZPB5 146 aa11.83□□□□□ -0.52
TRIM39-201ENST00000376656 RS1O15537 224 aa11.83□□□□□ -0.52
TRIM39-201ENST00000376656 C18orf65Q6ZTR6 163 aa11.83□□□□□ -0.52
TRIM39-201ENST00000376656 C3orf22Q8N5N4 141 aa11.83□□□□□ -0.52
TRIM39-201ENST00000376656 Q9HAA7 133 aa11.83□□□□□ -0.52
TRIM39-201ENST00000376656 CSMD2Q7Z408 3487 aa11.83□□□□□ -0.52
TRIM39-201ENST00000376656 COPS9Q8WXC6 57 aa11.82□□□□□ -0.52
TRIM39-201ENST00000376656 PPDPFQ9H3Y8 114 aa11.82□□□□□ -0.52
TRIM39-201ENST00000376656 PEMTQ9UBM1 199 aa11.81□□□□□ -0.52
TRIM39-201ENST00000376656 VPREB3Q9UKI3 123 aa11.81□□□□□ -0.52
TRIM39-201ENST00000376656 GAGE2AQ6NT46 116 aa11.81□□□□□ -0.52
TRIM39-201ENST00000376656 F5H768 121 aa11.8□□□□□ -0.52
TRIM39-201ENST00000376656 B4DSR2 109 aa11.8□□□□□ -0.52
TRIM39-201ENST00000376656 UBE2E2Q96LR5 201 aa11.8□□□□□ -0.52
TRIM39-201ENST00000376656 GNLYP22749 145 aa11.79□□□□□ -0.52
TRIM39-201ENST00000376656 FAM19A3Q7Z5A8 133 aa11.79□□□□□ -0.52
TRIM39-201ENST00000376656 C5orf38Q86SI9 138 aa11.79□□□□□ -0.52
TRIM39-201ENST00000376656 UQCRQO14949 82 aa11.79□□□□□ -0.52
TRIM39-201ENST00000376656 NTM-AS1Q6ZSK4 140 aa11.79□□□□□ -0.52
TRIM39-201ENST00000376656 FAM222AQ5U5X8 452 aa11.78□□□□□ -0.52
TRIM39-201ENST00000376656 Q96MF0 132 aa11.78□□□□□ -0.52
TRIM39-201ENST00000376656 MAP6D1Q9H9H5 199 aa11.78□□□□□ -0.52
TRIM39-201ENST00000376656 NCOR2Q9Y618 2525 aa11.78□□□□□ -0.52
TRIM39-201ENST00000376656 MALP21145 153 aa11.78□□□□□ -0.52
TRIM39-201ENST00000376656 HIST2H2BCQ6DN03 193 aa11.78□□□□□ -0.52
TRIM39-201ENST00000376656 HIST2H2BDQ6DRA6 164 aa11.78□□□□□ -0.52
TRIM39-201ENST00000376656 KLK5Q9Y337 293 aaPredicted RBP11.78□□□□□ -0.52
TRIM39-201ENST00000376656 LINC00526Q96FQ7 95 aa11.77□□□□□ -0.52
TRIM39-201ENST00000376656 INSP01308 110 aa11.76□□□□□ -0.53
TRIM39-201ENST00000376656 INAFM2P0DMQ5 153 aa11.76□□□□□ -0.53
TRIM39-201ENST00000376656 CXCL5P42830 114 aa11.76□□□□□ -0.53
TRIM39-201ENST00000376656 LINC00337Q8N6G1 96 aa11.76□□□□□ -0.53
TRIM39-201ENST00000376656 CDC42SE2Q9NRR3 84 aa11.76□□□□□ -0.53
TRIM39-201ENST00000376656 C9orf129Q5T035 196 aaKnown RBP11.76□□□□□ -0.53
TRIM39-201ENST00000376656 ZNF702PQ9H963 129 aa11.76□□□□□ -0.53
TRIM39-201ENST00000376656 XCL2Q9UBD3 114 aa11.76□□□□□ -0.53
TRIM39-201ENST00000376656 RPL28P46779 137 aaKnown RBP11.75□□□□□ -0.53
TRIM39-201ENST00000376656 TRGV1A0A0A0MS02 117 aa11.75□□□□□ -0.53
TRIM39-201ENST00000376656 CHD8Q9HCK8 2581 aa11.75□□□□□ -0.53
TRIM39-201ENST00000376656 ATP5G1P05496 136 aa11.75□□□□□ -0.53
TRIM39-201ENST00000376656 CSDC2Q9Y534 153 aaKnown RBP11.75□□□□□ -0.53
TRIM39-201ENST00000376656 ZANQ9Y493 2812 aa11.74□□□□□ -0.53
TRIM39-201ENST00000376656 CRPP02741 224 aa11.74□□□□□ -0.53
TRIM39-201ENST00000376656 C2CD3Q4AC94 2353 aa11.74□□□□□ -0.53
TRIM39-201ENST00000376656 IGKV2-28A0A075B6P5 120 aa11.74□□□□□ -0.53
TRIM39-201ENST00000376656 IGKV2D-28P01615 120 aa11.74□□□□□ -0.53
TRIM39-201ENST00000376656 A0A087WYN8 130 aa11.73□□□□□ -0.53
TRIM39-201ENST00000376656 TRAV13-2A0A0B4J235 113 aa11.73□□□□□ -0.53
TRIM39-201ENST00000376656 MIR7-3HGQ8N6C7 128 aa11.73□□□□□ -0.53
TRIM39-201ENST00000376656 COX7CP15954 63 aa11.73□□□□□ -0.53
TRIM39-201ENST00000376656 RPL36AP83881 106 aaKnown RBP11.73□□□□□ -0.53
TRIM39-201ENST00000376656 RPL36ALQ969Q0 106 aaKnown RBP11.73□□□□□ -0.53
TRIM39-201ENST00000376656 C2orf48Q96LS8 159 aa11.73□□□□□ -0.53
TRIM39-201ENST00000376656 LOC107984640A0A0U1RRK4 108 aa11.73□□□□□ -0.53
TRIM39-201ENST00000376656 K7EQD1 137 aa11.72□□□□□ -0.53
TRIM39-201ENST00000376656 ITPR1Q14643 2758 aa11.72□□□□□ -0.53
TRIM39-201ENST00000376656 CUBNO60494 3623 aa11.72□□□□□ -0.53
TRIM39-201ENST00000376656 MAPK1IP1LQ8NDC0 245 aa11.71□□□□□ -0.53
TRIM39-201ENST00000376656 NRGNQ92686 78 aa11.71□□□□□ -0.53
TRIM39-201ENST00000376656 C14orf132Q9NPU4 83 aa11.71□□□□□ -0.53
TRIM39-201ENST00000376656 SND1-IT1Q9HBX3 110 aa11.71□□□□□ -0.53
TRIM39-201ENST00000376656 PF4P02776 101 aa11.71□□□□□ -0.54
TRIM39-201ENST00000376656 HIST1H4AP62805 103 aaKnown RBP11.71□□□□□ -0.54
TRIM39-201ENST00000376656 Q6ZTI0 123 aa11.71□□□□□ -0.54
TRIM39-201ENST00000376656 SMIM11BQ8TCY0 68 aa11.71□□□□□ -0.54
TRIM39-201ENST00000376656 C1orf158Q8N1D5 194 aa11.7□□□□□ -0.54
TRIM39-201ENST00000376656 DYNLRB2Q8TF09 96 aa11.7□□□□□ -0.54
TRIM39-201ENST00000376656 TOMM7Q9P0U1 55 aa11.7□□□□□ -0.54
TRIM39-201ENST00000376656 MXRA5Q9NR99 2828 aa11.7□□□□□ -0.54
TRIM39-201ENST00000376656 USP9YO00507 2555 aaPredicted RBP11.69□□□□□ -0.54
TRIM39-201ENST00000376656 DNAL4O96015 105 aa11.69□□□□□ -0.54
TRIM39-201ENST00000376656 IL17DQ8TAD2 202 aa11.69□□□□□ -0.54
TRIM39-201ENST00000376656 COX7B2Q8TF08 81 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms