RNA–Protein interactions for RNA: ENST00000375850.3

C9orf47-202, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene C9orf47, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-202ENST00000375850 FOXA3P55318 350 aaPredicted RBP14.48□□□□□ -0.09
C9orf47-202ENST00000375850 CD164L2Q6UWJ8 174 aa14.48□□□□□ -0.09
C9orf47-202ENST00000375850 Q6ZRP5 223 aa14.48□□□□□ -0.09
C9orf47-202ENST00000375850 MRPL52Q86TS9 123 aaKnown RBP14.48□□□□□ -0.09
C9orf47-202ENST00000375850 ST20Q9HBF5 79 aa14.48□□□□□ -0.09
C9orf47-202ENST00000375850 SYCNQ0VAF6 134 aa14.46□□□□□ -0.09
C9orf47-202ENST00000375850 TCTE3Q8IZS6 198 aa14.46□□□□□ -0.09
C9orf47-202ENST00000375850 ISOC2Q96AB3 205 aa14.46□□□□□ -0.09
C9orf47-202ENST00000375850 TNXBP22105 4242 aa14.45□□□□□ -0.1
C9orf47-202ENST00000375850 TSHBP01222 138 aa14.45□□□□□ -0.1
C9orf47-202ENST00000375850 CDC42SE2Q9NRR3 84 aa14.45□□□□□ -0.1
C9orf47-202ENST00000375850 SMAGPQ0VAQ4 97 aa14.44□□□□□ -0.1
C9orf47-202ENST00000375850 TRBV27A0A0K0K1C4 114 aa14.43□□□□□ -0.1
C9orf47-202ENST00000375850 C7orf77A4D0Y5 90 aa14.43□□□□□ -0.1
C9orf47-202ENST00000375850 KRTAP10-8P60410 259 aa14.43□□□□□ -0.1
C9orf47-202ENST00000375850 ZNF664Q8N3J9 261 aa14.43□□□□□ -0.1
C9orf47-202ENST00000375850 TMEM191AQ9H0A3 160 aa14.43□□□□□ -0.1
C9orf47-202ENST00000375850 TMEM242Q9NWH2 141 aa14.43□□□□□ -0.1
C9orf47-202ENST00000375850 POLR2KP53803 58 aaKnown RBP14.42□□□□□ -0.1
C9orf47-202ENST00000375850 SRSF9Q13242 221 aaKnown RBP eCLIP14.42□□□□□ -0.1
C9orf47-202ENST00000375850 LRP2P98164 4655 aa14.42□□□□□ -0.1
C9orf47-202ENST00000375850 LOC107984640A0A0U1RRK4 108 aa14.41□□□□□ -0.1
C9orf47-202ENST00000375850 A0A1B0GUT8 65 aa14.41□□□□□ -0.1
C9orf47-202ENST00000375850 CAMPP49913 170 aa14.41□□□□□ -0.1
C9orf47-202ENST00000375850 PTTG1IPP53801 180 aa14.41□□□□□ -0.1
C9orf47-202ENST00000375850 BLOC1S1P78537 153 aa14.41□□□□□ -0.1
C9orf47-202ENST00000375850 LINC00526Q96FQ7 95 aa14.41□□□□□ -0.1
C9orf47-202ENST00000375850 C1orf196B1AJZ1 125 aa14.4□□□□□ -0.1
C9orf47-202ENST00000375850 PPP1R17O96001 155 aa14.4□□□□□ -0.1
C9orf47-202ENST00000375850 MALP21145 153 aa14.4□□□□□ -0.1
C9orf47-202ENST00000375850 CSDC2Q9Y534 153 aaKnown RBP14.4□□□□□ -0.1
C9orf47-202ENST00000375850 TSKUQ8WUA8 353 aa14.39□□□□□ -0.11
C9orf47-202ENST00000375850 HIGD1CA8MV81 97 aa14.38□□□□□ -0.11
C9orf47-202ENST00000375850 COX7A2LO14548 114 aa14.38□□□□□ -0.11
C9orf47-202ENST00000375850 IGLV4-69A0A075B6H9 119 aa14.37□□□□□ -0.11
C9orf47-202ENST00000375850 VCYO14598 125 aa14.37□□□□□ -0.11
C9orf47-202ENST00000375850 RAB4AP20338 218 aa14.37□□□□□ -0.11
C9orf47-202ENST00000375850 GAS8-AS1O95177 125 aa14.36□□□□□ -0.11
C9orf47-202ENST00000375850 FCER1GP30273 86 aa14.36□□□□□ -0.11
C9orf47-202ENST00000375850 GAGE2BQ13066 116 aa14.35□□□□□ -0.11
C9orf47-202ENST00000375850 C2orf48Q96LS8 159 aa14.35□□□□□ -0.11
C9orf47-202ENST00000375850 APOMO95445 188 aa14.34□□□□□ -0.11
C9orf47-202ENST00000375850 CAMK2N2Q96S95 79 aa14.34□□□□□ -0.11
C9orf47-202ENST00000375850 KIR2DL4Q99706 377 aa14.34□□□□□ -0.11
C9orf47-202ENST00000375850 OSTCQ9NRP0 149 aa14.34□□□□□ -0.11
C9orf47-202ENST00000375850 CEBPGP53567 150 aa14.33□□□□□ -0.12
C9orf47-202ENST00000375850 LINC01551Q86U37 167 aa14.33□□□□□ -0.12
C9orf47-202ENST00000375850 AMN1Q8IY45 258 aa14.33□□□□□ -0.12
C9orf47-202ENST00000375850 NUP35Q8NFH5 326 aa14.33□□□□□ -0.12
C9orf47-202ENST00000375850 SMIM7Q9BQ49 75 aa14.33□□□□□ -0.12
C9orf47-202ENST00000375850 PPP1R2P9O14990 202 aa14.32□□□□□ -0.12
C9orf47-202ENST00000375850 RIGQ13278 110 aa14.32□□□□□ -0.12
C9orf47-202ENST00000375850 TMEM18Q96B42 140 aa14.32□□□□□ -0.12
C9orf47-202ENST00000375850 UBE2D4Q9Y2X8 147 aa14.32□□□□□ -0.12
C9orf47-202ENST00000375850 SUMO2P61956 95 aaKnown RBP14.31□□□□□ -0.12
C9orf47-202ENST00000375850 RNF151Q2KHN1 245 aa14.3□□□□□ -0.12
C9orf47-202ENST00000375850 TIMM21Q9BVV7 248 aa14.3□□□□□ -0.12
C9orf47-202ENST00000375850 ALKAL2Q6UX46 152 aa14.29□□□□□ -0.12
C9orf47-202ENST00000375850 EIF5A2Q9GZV4 153 aaKnown RBP14.29□□□□□ -0.12
C9orf47-202ENST00000375850 TRAV13-1A0A0B4J241 112 aa14.28□□□□□ -0.12
C9orf47-202ENST00000375850 A0A1W2PNN7 141 aa14.28□□□□□ -0.12
C9orf47-202ENST00000375850 F8WDY8 70 aa14.28□□□□□ -0.12
C9orf47-202ENST00000375850 TCAPO15273 167 aa14.28□□□□□ -0.12
C9orf47-202ENST00000375850 MT-ND6P03923 174 aa14.28□□□□□ -0.12
C9orf47-202ENST00000375850 ODF1Q14990 250 aa14.28□□□□□ -0.12
C9orf47-202ENST00000375850 ZNF727A8MUV8 499 aa14.27□□□□□ -0.13
C9orf47-202ENST00000375850 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.27□□□□□ -0.13
C9orf47-202ENST00000375850 C9orf116Q5BN46 136 aaPredicted RBP14.27□□□□□ -0.13
C9orf47-202ENST00000375850 NRACQ8N912 160 aa14.27□□□□□ -0.13
C9orf47-202ENST00000375850 OR10D4PQ8NGN7 298 aa14.27□□□□□ -0.13
C9orf47-202ENST00000375850 RPL18AQ02543 176 aaKnown RBP14.26□□□□□ -0.13
C9orf47-202ENST00000375850 PSORS1C2Q9UIG4 136 aa14.26□□□□□ -0.13
C9orf47-202ENST00000375850 RNF213Q63HN8 5207 aa14.25□□□□□ -0.13
C9orf47-202ENST00000375850 LINC00862A6NCI5 91 aa14.24□□□□□ -0.13
C9orf47-202ENST00000375850 SMKR1H3BMG3 65 aa14.24□□□□□ -0.13
C9orf47-202ENST00000375850 SPAG11BQ08648 103 aa14.24□□□□□ -0.13
C9orf47-202ENST00000375850 C5orf38Q86SI9 138 aa14.24□□□□□ -0.13
C9orf47-202ENST00000375850 C20orf78Q9BR46 151 aa14.24□□□□□ -0.13
C9orf47-202ENST00000375850 NAT8BQ9UHF3 227 aa14.24□□□□□ -0.13
C9orf47-202ENST00000375850 V9GYV3 84 aa14.24□□□□□ -0.13
C9orf47-202ENST00000375850 RPL32P62910 135 aaKnown RBP14.23□□□□□ -0.13
C9orf47-202ENST00000375850 RNASE13Q5GAN3 156 aaKnown RBP14.23□□□□□ -0.13
C9orf47-202ENST00000375850 IMMP2LQ96T52 175 aa14.23□□□□□ -0.13
C9orf47-202ENST00000375850 MRPL35Q9NZE8 188 aaKnown RBP14.23□□□□□ -0.13
C9orf47-202ENST00000375850 FAM104BQ5XKR9 115 aa14.22□□□□□ -0.13
C9orf47-202ENST00000375850 Q6ZUT4 128 aa14.22□□□□□ -0.13
C9orf47-202ENST00000375850 C1orf137Q5JT78 98 aa14.21□□□□□ -0.13
C9orf47-202ENST00000375850 AKAP14Q86UN6 197 aa14.21□□□□□ -0.13
C9orf47-202ENST00000375850 TRBV24-1A0A075B6N3 115 aa14.2□□□□□ -0.14
C9orf47-202ENST00000375850 A0A1B0GW15 77 aa14.2□□□□□ -0.14
C9orf47-202ENST00000375850 FAM74A3Q4VXF1 159 aa14.2□□□□□ -0.14
C9orf47-202ENST00000375850 DIRC1Q969H9 104 aa14.2□□□□□ -0.14
C9orf47-202ENST00000375850 SRP19P09132 144 aaKnown RBP14.19□□□□□ -0.14
C9orf47-202ENST00000375850 MRPL51Q4U2R6 128 aaKnown RBP14.19□□□□□ -0.14
C9orf47-202ENST00000375850 SPANXA1Q9NS26 97 aa14.19□□□□□ -0.14
C9orf47-202ENST00000375850 NDUFA1O15239 70 aa14.18□□□□□ -0.14
C9orf47-202ENST00000375850 TMEM241Q24JQ0 296 aa14.18□□□□□ -0.14
C9orf47-202ENST00000375850 PHF5AQ7RTV0 110 aaKnown RBP14.18□□□□□ -0.14
C9orf47-202ENST00000375850 OPRPNQ99935 248 aaPredicted RBP14.18□□□□□ -0.14
C9orf47-202ENST00000375850 TLX1NBP0CAT3 122 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms