RNA–Protein interactions for RNA: ENST00000375427.4

SCN2A-202, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN2A, Length 8,553 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-202ENST00000375427 IGLV8-61A0A075B6I0 122 aa4.53□□□□□ -1.68
SCN2A-202ENST00000375427 TRBV6-8A0A0A6YYG3 113 aa4.53□□□□□ -1.68
SCN2A-202ENST00000375427 LOC100131303A0A0U1RQF7 123 aa4.53□□□□□ -1.68
SCN2A-202ENST00000375427 LINC01565O15544 149 aa4.53□□□□□ -1.68
SCN2A-202ENST00000375427 FAM229AH3BQW9 127 aa4.53□□□□□ -1.68
SCN2A-202ENST00000375427 PLA2G5P39877 138 aa4.53□□□□□ -1.68
SCN2A-202ENST00000375427 BRD3OSQ6XYD6 125 aa4.53□□□□□ -1.68
SCN2A-202ENST00000375427 Q8N814 137 aa4.53□□□□□ -1.68
SCN2A-202ENST00000375427 IGLV9-49A0A0B4J1Y8 123 aa4.53□□□□□ -1.68
SCN2A-202ENST00000375427 COL5A1P20908 1838 aaPredicted RBP4.53□□□□□ -1.68
SCN2A-202ENST00000375427 LINC00474Q9P2X8 69 aa4.53□□□□□ -1.68
SCN2A-202ENST00000375427 H3BRN7 92 aa4.53□□□□□ -1.68
SCN2A-202ENST00000375427 TRAV22A0A0B4J277 110 aa4.52□□□□□ -1.69
SCN2A-202ENST00000375427 SHISA4Q96DD7 197 aa4.52□□□□□ -1.69
SCN2A-202ENST00000375427 RPL39P62891 51 aaKnown RBP4.52□□□□□ -1.69
SCN2A-202ENST00000375427 RSPO2Q6UXX9 243 aaPredicted RBP4.52□□□□□ -1.69
SCN2A-202ENST00000375427 LINC01560Q8TB33 94 aa4.52□□□□□ -1.69
SCN2A-202ENST00000375427 C10orf55Q5SWW7 151 aa4.52□□□□□ -1.69
SCN2A-202ENST00000375427 HRKO00198 91 aa4.52□□□□□ -1.69
SCN2A-202ENST00000375427 IGKV1-17P01599 117 aa4.52□□□□□ -1.69
SCN2A-202ENST00000375427 ALKAL1Q6UXT8 129 aa4.52□□□□□ -1.69
SCN2A-202ENST00000375427 JMJD1CQ15652 2540 aa4.52□□□□□ -1.69
SCN2A-202ENST00000375427 C20orf204Q6ZNR8 217 aa4.52□□□□□ -1.69
SCN2A-202ENST00000375427 PRR15Q8IV56 129 aa4.52□□□□□ -1.69
SCN2A-202ENST00000375427 MUC7Q8TAX7 377 aa4.52□□□□□ -1.69
SCN2A-202ENST00000375427 IGKV1-12A0A0C4DH73 117 aa4.52□□□□□ -1.69
SCN2A-202ENST00000375427 NTM-AS1Q6ZSK4 140 aa4.52□□□□□ -1.69
SCN2A-202ENST00000375427 ZNF833PQ6ZTB9 187 aa4.52□□□□□ -1.69
SCN2A-202ENST00000375427 LINC01600Q96MT4 127 aa4.52□□□□□ -1.69
SCN2A-202ENST00000375427 LY6LH3BQJ8 138 aa4.51□□□□□ -1.69
SCN2A-202ENST00000375427 IGHV1-46P01743 117 aa4.51□□□□□ -1.69
SCN2A-202ENST00000375427 Q8TCH9 128 aa4.51□□□□□ -1.69
SCN2A-202ENST00000375427 IGLV2-23P01705 113 aa4.51□□□□□ -1.69
SCN2A-202ENST00000375427 LINC00575Q6W349 94 aa4.51□□□□□ -1.69
SCN2A-202ENST00000375427 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.51□□□□□ -1.69
SCN2A-202ENST00000375427 IGLV4-3A0A075B6K6 122 aa4.51□□□□□ -1.69
SCN2A-202ENST00000375427 LINC00173Q6ZV60 143 aa4.51□□□□□ -1.69
SCN2A-202ENST00000375427 FAM110DQ8TAY7 271 aaPredicted RBP4.51□□□□□ -1.69
SCN2A-202ENST00000375427 H3BUA1 57 aa4.51□□□□□ -1.69
SCN2A-202ENST00000375427 COL9A3Q14050 684 aaPredicted RBP4.51□□□□□ -1.69
SCN2A-202ENST00000375427 LINC01356Q8N9X3 169 aa4.51□□□□□ -1.69
SCN2A-202ENST00000375427 IGKV2D-30A0A075B6S6 120 aa4.51□□□□□ -1.69
SCN2A-202ENST00000375427 IGKV2-30P06310 120 aa4.51□□□□□ -1.69
SCN2A-202ENST00000375427 A0A0G2JRQ6 117 aa4.51□□□□□ -1.69
SCN2A-202ENST00000375427 LINC00322Q6ZN03 302 aaPredicted RBP4.51□□□□□ -1.69
SCN2A-202ENST00000375427 WFDC5Q8TCV5 224 aa4.51□□□□□ -1.69
SCN2A-202ENST00000375427 A0A1B0GW54 56 aa4.5□□□□□ -1.69
SCN2A-202ENST00000375427 ZNF883P0CG24 379 aa4.5□□□□□ -1.69
SCN2A-202ENST00000375427 E7EQL1 145 aa4.5□□□□□ -1.69
SCN2A-202ENST00000375427 SPRR3Q9UBC9 169 aa4.5□□□□□ -1.69
SCN2A-202ENST00000375427 MGAMO43451 1857 aa4.5□□□□□ -1.69
SCN2A-202ENST00000375427 BCORQ6W2J9 1755 aa4.5□□□□□ -1.69
SCN2A-202ENST00000375427 SMIM1B2RUZ4 78 aa4.5□□□□□ -1.69
SCN2A-202ENST00000375427 LINC01590Q5TEZ4 76 aa4.5□□□□□ -1.69
SCN2A-202ENST00000375427 H3BPC8 53 aa4.5□□□□□ -1.69
SCN2A-202ENST00000375427 IGLV7-43P04211 117 aa4.49□□□□□ -1.69
SCN2A-202ENST00000375427 MSMPQ1L6U9 139 aa4.49□□□□□ -1.69
SCN2A-202ENST00000375427 C1orf137Q5JT78 98 aa4.49□□□□□ -1.69
SCN2A-202ENST00000375427 SAP25Q8TEE9 199 aa4.49□□□□□ -1.69
SCN2A-202ENST00000375427 SNED1Q8TER0 1413 aa4.49□□□□□ -1.69
SCN2A-202ENST00000375427 CIRBP-AS1Q8TBR5 109 aa4.49□□□□□ -1.69
SCN2A-202ENST00000375427 TM2D3Q9BRN9 247 aa4.49□□□□□ -1.69
SCN2A-202ENST00000375427 TNRC6CQ9HCJ0 1690 aaKnown RBP4.49□□□□□ -1.69
SCN2A-202ENST00000375427 KIAA1549LQ6ZVL6 1849 aa4.49□□□□□ -1.69
SCN2A-202ENST00000375427 SRRM5B3KS81 715 aa4.49□□□□□ -1.69
SCN2A-202ENST00000375427 LYPD5Q6UWN5 251 aa4.49□□□□□ -1.69
SCN2A-202ENST00000375427 IGLV3-25P01717 112 aa4.49□□□□□ -1.69
SCN2A-202ENST00000375427 MIR22HGQ0VDD5 57 aa4.49□□□□□ -1.69
SCN2A-202ENST00000375427 EIF4EBP1Q13541 118 aaPredicted RBP4.49□□□□□ -1.69
SCN2A-202ENST00000375427 C9orf129Q5T035 196 aaKnown RBP4.49□□□□□ -1.69
SCN2A-202ENST00000375427 APLNQ9ULZ1 77 aa4.49□□□□□ -1.69
SCN2A-202ENST00000375427 ZNF142P52746 1687 aaPredicted RBP4.49□□□□□ -1.69
SCN2A-202ENST00000375427 PCSK5Q92824 1860 aa4.49□□□□□ -1.69
SCN2A-202ENST00000375427 IGLV4-69A0A075B6H9 119 aa4.49□□□□□ -1.69
SCN2A-202ENST00000375427 IGKV2-28A0A075B6P5 120 aa4.49□□□□□ -1.69
SCN2A-202ENST00000375427 IGKV2D-28P01615 120 aa4.49□□□□□ -1.69
SCN2A-202ENST00000375427 SIP14410 1827 aa4.49□□□□□ -1.69
SCN2A-202ENST00000375427 DEFB103AP81534 67 aa4.48□□□□□ -1.69
SCN2A-202ENST00000375427 C9orf66Q5T8R8 295 aa4.48□□□□□ -1.69
SCN2A-202ENST00000375427 CISD3P0C7P0 127 aa4.48□□□□□ -1.69
SCN2A-202ENST00000375427 ATP6V0E1O15342 81 aa4.48□□□□□ -1.69
SCN2A-202ENST00000375427 HMGA1P17096 107 aaKnown RBP4.48□□□□□ -1.69
SCN2A-202ENST00000375427 IGF2-ASQ6U949 168 aa4.48□□□□□ -1.69
SCN2A-202ENST00000375427 ADAMTS20P59510 1910 aa4.47□□□□□ -1.69
SCN2A-202ENST00000375427 ZNF843Q8N446 348 aa4.47□□□□□ -1.69
SCN2A-202ENST00000375427 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.47□□□□□ -1.69
SCN2A-202ENST00000375427 ADAMTSL3P82987 1691 aa4.47□□□□□ -1.69
SCN2A-202ENST00000375427 ARTNQ5T4W7 220 aa4.47□□□□□ -1.69
SCN2A-202ENST00000375427 TPSG1Q9NRR2 321 aa4.47□□□□□ -1.69
SCN2A-202ENST00000375427 WIPF1O43516 503 aa4.47□□□□□ -1.69
SCN2A-202ENST00000375427 KIAA0087Q14695 138 aa4.47□□□□□ -1.69
SCN2A-202ENST00000375427 CDIP1Q9H305 208 aa4.47□□□□□ -1.69
SCN2A-202ENST00000375427 LINC00473A8K010 186 aa4.47□□□□□ -1.69
SCN2A-202ENST00000375427 USP9XQ93008 2570 aaPredicted RBP4.47□□□□□ -1.69
SCN2A-202ENST00000375427 BCE1O60756 84 aa4.47□□□□□ -1.69
SCN2A-202ENST00000375427 Q9UF83 564 aa4.47□□□□□ -1.69
SCN2A-202ENST00000375427 EIF4EBP2Q13542 120 aaPredicted RBP4.46□□□□□ -1.7
SCN2A-202ENST00000375427 FAM27E3Q08E93 113 aa4.46□□□□□ -1.7
SCN2A-202ENST00000375427 C1orf134Q5TEV5 83 aa4.46□□□□□ -1.7
SCN2A-202ENST00000375427 SMIM11BQ8TCY0 68 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 107.3 ms