RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 HHLA3Q9XRX5 114 aa6.04□□□□□ -1.44
UBR4-202ENST00000375224 CSMD2Q7Z408 3487 aa6.04□□□□□ -1.44
UBR4-202ENST00000375224 PLNP26678 52 aa6.04□□□□□ -1.44
UBR4-202ENST00000375224 LINC00467Q9BRT7 94 aa6.04□□□□□ -1.44
UBR4-202ENST00000375224 A0A087WWL8 130 aa6.03□□□□□ -1.44
UBR4-202ENST00000375224 TRBV7-7A0A0K0K1E9 115 aa6.03□□□□□ -1.44
UBR4-202ENST00000375224 H7C1H1 209 aa6.03□□□□□ -1.44
UBR4-202ENST00000375224 H7C2G1 150 aa6.03□□□□□ -1.44
UBR4-202ENST00000375224 CD28P10747 220 aa6.03□□□□□ -1.44
UBR4-202ENST00000375224 POLR2KP53803 58 aaKnown RBP6.03□□□□□ -1.44
UBR4-202ENST00000375224 ATXN8Q156A1 80 aa6.03□□□□□ -1.44
UBR4-202ENST00000375224 ZNF876PQ49A33 203 aa6.03□□□□□ -1.44
UBR4-202ENST00000375224 C2orf82Q6UX34 121 aa6.03□□□□□ -1.44
UBR4-202ENST00000375224 C2orf66Q6UXQ4 117 aa6.03□□□□□ -1.44
UBR4-202ENST00000375224 LINC01006Q8NI28 216 aa6.03□□□□□ -1.44
UBR4-202ENST00000375224 CRYGAP11844 174 aa6.02□□□□□ -1.44
UBR4-202ENST00000375224 HILS1P60008 231 aa6.02□□□□□ -1.44
UBR4-202ENST00000375224 FAM74A4Q5TZK3 123 aa6.02□□□□□ -1.44
UBR4-202ENST00000375224 PYGO1Q9Y3Y4 419 aa6.02□□□□□ -1.44
UBR4-202ENST00000375224 TENM4Q6N022 2769 aa6.02□□□□□ -1.45
UBR4-202ENST00000375224 GCN1Q92616 2671 aaKnown RBP6.02□□□□□ -1.45
UBR4-202ENST00000375224 MXRA5Q9NR99 2828 aa6.02□□□□□ -1.45
UBR4-202ENST00000375224 A0A0U1RQV1 116 aa6.02□□□□□ -1.45
UBR4-202ENST00000375224 F8VRH5 84 aa6.02□□□□□ -1.45
UBR4-202ENST00000375224 INSP01308 110 aa6.02□□□□□ -1.45
UBR4-202ENST00000375224 MYO9AB2RTY4 2548 aa6.02□□□□□ -1.45
UBR4-202ENST00000375224 TRBV27A0A0K0K1C4 114 aa6.01□□□□□ -1.45
UBR4-202ENST00000375224 SDHAF1A6NFY7 115 aa6.01□□□□□ -1.45
UBR4-202ENST00000375224 ZNF815PA8K554 130 aa6.01□□□□□ -1.45
UBR4-202ENST00000375224 ATOX1O00244 68 aa6.01□□□□□ -1.45
UBR4-202ENST00000375224 MRPL35Q9NZE8 188 aaKnown RBP6.01□□□□□ -1.45
UBR4-202ENST00000375224 M0QY20 66 aa6.01□□□□□ -1.45
UBR4-202ENST00000375224 TMEM170BQ5T4T1 132 aa6.01□□□□□ -1.45
UBR4-202ENST00000375224 LINC00336Q6ZUF6 198 aa6.01□□□□□ -1.45
UBR4-202ENST00000375224 STHQ8IWL8 128 aa6.01□□□□□ -1.45
UBR4-202ENST00000375224 TMEM141Q96I45 108 aa6.01□□□□□ -1.45
UBR4-202ENST00000375224 PRO1854Q9UHT4 67 aa6.01□□□□□ -1.45
UBR4-202ENST00000375224 SORL1Q92673 2214 aa6.01□□□□□ -1.45
UBR4-202ENST00000375224 TLN2Q9Y4G6 2542 aa6.01□□□□□ -1.45
UBR4-202ENST00000375224 CCDC168Q8NDH2 2452 aa6.01□□□□□ -1.45
UBR4-202ENST00000375224 RBMY1BA6NDE4 496 aaKnown RBP6.01□□□□□ -1.45
UBR4-202ENST00000375224 RBMY1EA6NEQ0 496 aaKnown RBP6.01□□□□□ -1.45
UBR4-202ENST00000375224 RBMY1DP0C7P1 496 aaKnown RBP6.01□□□□□ -1.45
UBR4-202ENST00000375224 RHOHQ15669 191 aa6.01□□□□□ -1.45
UBR4-202ENST00000375224 NDUFA11Q86Y39 141 aa6.01□□□□□ -1.45
UBR4-202ENST00000375224 C11orf44Q8N8P7 122 aa6.01□□□□□ -1.45
UBR4-202ENST00000375224 NEXN-AS1Q8NBZ9 246 aa6.01□□□□□ -1.45
UBR4-202ENST00000375224 RBMY1A1P0DJD3 496 aaKnown RBP6□□□□□ -1.45
UBR4-202ENST00000375224 RBMY1CP0DJD4 496 aa6□□□□□ -1.45
UBR4-202ENST00000375224 RBMY1FQ15415 496 aaKnown RBP6□□□□□ -1.45
UBR4-202ENST00000375224 PAPPA-AS1Q5QFB9 102 aa6□□□□□ -1.45
UBR4-202ENST00000375224 CEMP1Q6PRD7 247 aaPredicted RBP6□□□□□ -1.45
UBR4-202ENST00000375224 LINC01620Q4KN68 170 aa6□□□□□ -1.45
UBR4-202ENST00000375224 FLNAP21333 2647 aaKnown RBP6□□□□□ -1.45
UBR4-202ENST00000375224 J3QQQ9 107 aa6□□□□□ -1.45
UBR4-202ENST00000375224 HTN1P15515 57 aa6□□□□□ -1.45
UBR4-202ENST00000375224 UBE2D1P51668 147 aa6□□□□□ -1.45
UBR4-202ENST00000375224 TIMM17AQ99595 171 aa6□□□□□ -1.45
UBR4-202ENST00000375224 SONP18583 2426 aaKnown RBP5.99□□□□□ -1.45
UBR4-202ENST00000375224 FAM240AA0A1B0GVK7 77 aa5.99□□□□□ -1.45
UBR4-202ENST00000375224 Q5XG85 94 aa5.99□□□□□ -1.45
UBR4-202ENST00000375224 NBPF19A0A087WUL8 3843 aa5.99□□□□□ -1.45
UBR4-202ENST00000375224 TRBV10-2A0A0K0K1G8 114 aa5.99□□□□□ -1.45
UBR4-202ENST00000375224 A0A0U1RRA0 63 aa5.99□□□□□ -1.45
UBR4-202ENST00000375224 I3L3M4 83 aa5.99□□□□□ -1.45
UBR4-202ENST00000375224 ODF3L2Q3SX64 289 aa5.99□□□□□ -1.45
UBR4-202ENST00000375224 TP53TG1Q9Y2A0 90 aa5.99□□□□□ -1.45
UBR4-202ENST00000375224 ACYP1P07311 99 aa5.98□□□□□ -1.45
UBR4-202ENST00000375224 NSUN5P1Q3KNT7 163 aa5.98□□□□□ -1.45
UBR4-202ENST00000375224 BRK1Q8WUW1 75 aa5.98□□□□□ -1.45
UBR4-202ENST00000375224 NDUFC2O95298 119 aa5.98□□□□□ -1.45
UBR4-202ENST00000375224 IGIPA6NJ69 53 aa5.97□□□□□ -1.45
UBR4-202ENST00000375224 COX6CP09669 75 aa5.97□□□□□ -1.45
UBR4-202ENST00000375224 NPC2P61916 151 aa5.97□□□□□ -1.45
UBR4-202ENST00000375224 LINC00643Q86TS7 51 aa5.97□□□□□ -1.45
UBR4-202ENST00000375224 PROK1P58294 105 aa5.97□□□□□ -1.45
UBR4-202ENST00000375224 BEAN1Q3B7T3 259 aa5.97□□□□□ -1.45
UBR4-202ENST00000375224 C6orf226Q5I0X4 101 aa5.97□□□□□ -1.45
UBR4-202ENST00000375224 HIST2H2BDQ6DRA6 164 aa5.97□□□□□ -1.45
UBR4-202ENST00000375224 PDZD2O15018 2839 aa5.97□□□□□ -1.45
UBR4-202ENST00000375224 HECTD1Q9ULT8 2610 aa5.97□□□□□ -1.45
UBR4-202ENST00000375224 RETNQ9HD89 108 aa5.97□□□□□ -1.45
UBR4-202ENST00000375224 FLNBO75369 2602 aaKnown RBP5.96□□□□□ -1.45
UBR4-202ENST00000375224 IGLV1-51P01701 117 aa5.96□□□□□ -1.45
UBR4-202ENST00000375224 C11orf72Q8NBR9 251 aa5.96□□□□□ -1.45
UBR4-202ENST00000375224 XCL2Q9UBD3 114 aa5.96□□□□□ -1.45
UBR4-202ENST00000375224 CFC1BP0CG36 223 aa5.96□□□□□ -1.46
UBR4-202ENST00000375224 CFC1P0CG37 223 aa5.96□□□□□ -1.46
UBR4-202ENST00000375224 LY6G6DO95868 133 aa5.95□□□□□ -1.46
UBR4-202ENST00000375224 TSHBP01222 138 aa5.95□□□□□ -1.46
UBR4-202ENST00000375224 C20orf203Q8NBC4 194 aa5.95□□□□□ -1.46
UBR4-202ENST00000375224 ZNF22P17026 224 aaPredicted RBP5.95□□□□□ -1.46
UBR4-202ENST00000375224 RPL39P62891 51 aaKnown RBP5.95□□□□□ -1.46
UBR4-202ENST00000375224 ADARB2-AS1A8MUL3 147 aa5.94□□□□□ -1.46
UBR4-202ENST00000375224 IGHV3-53P01767 116 aa5.94□□□□□ -1.46
UBR4-202ENST00000375224 IL17DQ8TAD2 202 aa5.94□□□□□ -1.46
UBR4-202ENST00000375224 H3BT86 120 aa5.94□□□□□ -1.46
UBR4-202ENST00000375224 C1orf158Q8N1D5 194 aa5.94□□□□□ -1.46
UBR4-202ENST00000375224 IGHV3-73A0A0B4J1V6 119 aa5.94□□□□□ -1.46
UBR4-202ENST00000375224 TMEM263Q8WUH6 116 aaKnown RBP5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 214.7 ms