RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 CDC42SE2Q9NRR3 84 aa10.02□□□□□ -0.81
HSPG2-201ENST00000374673 IGKV2D-24A0A075B6R9 120 aa10.01□□□□□ -0.81
HSPG2-201ENST00000374673 TRGC2P03986 189 aa10.01□□□□□ -0.81
HSPG2-201ENST00000374673 TNP2Q05952 138 aa10.01□□□□□ -0.81
HSPG2-201ENST00000374673 C1orf43Q9BWL3 253 aa10.01□□□□□ -0.81
HSPG2-201ENST00000374673 SPANXA1Q9NS26 97 aa10.01□□□□□ -0.81
HSPG2-201ENST00000374673 TRAV8-4A0A0B4J246 113 aa10□□□□□ -0.81
HSPG2-201ENST00000374673 PSCAO43653 123 aa10□□□□□ -0.81
HSPG2-201ENST00000374673 G0S2P27469 103 aa10□□□□□ -0.81
HSPG2-201ENST00000374673 C2orf66Q6UXQ4 117 aa10□□□□□ -0.81
HSPG2-201ENST00000374673 FA2HQ7L5A8 372 aa10□□□□□ -0.81
HSPG2-201ENST00000374673 ZNF664Q8N3J9 261 aa10□□□□□ -0.81
HSPG2-201ENST00000374673 CYSLTR1Q9Y271 337 aa10□□□□□ -0.81
HSPG2-201ENST00000374673 PYGO1Q9Y3Y4 419 aa10□□□□□ -0.81
HSPG2-201ENST00000374673 DNAH17Q9UFH2 4485 aa9.99□□□□□ -0.81
HSPG2-201ENST00000374673 URB1-AS1Q96HZ7 61 aa9.99□□□□□ -0.81
HSPG2-201ENST00000374673 MRPS36P82909 103 aaKnown RBP9.98□□□□□ -0.81
HSPG2-201ENST00000374673 Q6ZUT4 128 aa9.98□□□□□ -0.81
HSPG2-201ENST00000374673 FAM104AQ969W3 186 aa9.98□□□□□ -0.81
HSPG2-201ENST00000374673 AP5S1Q9NUS5 200 aa9.98□□□□□ -0.81
HSPG2-201ENST00000374673 IGKV3OR2-268A0A0C4DH90 116 aa9.97□□□□□ -0.81
HSPG2-201ENST00000374673 A0A1B0GVY2 172 aa9.97□□□□□ -0.81
HSPG2-201ENST00000374673 LINC01549A6NIU2 74 aa9.97□□□□□ -0.81
HSPG2-201ENST00000374673 LINC00614P0C842 121 aa9.97□□□□□ -0.81
HSPG2-201ENST00000374673 RAB5BP61020 215 aa9.97□□□□□ -0.81
HSPG2-201ENST00000374673 KRTAP26-1Q6PEX3 210 aa9.97□□□□□ -0.81
HSPG2-201ENST00000374673 MAPKAPK5-AS1Q8N8E1 139 aa9.97□□□□□ -0.81
HSPG2-201ENST00000374673 TOMM6Q96B49 74 aa9.97□□□□□ -0.81
HSPG2-201ENST00000374673 IGLV10-54A0A075B6I4 117 aa9.96□□□□□ -0.82
HSPG2-201ENST00000374673 A0A087WTM6 91 aa9.96□□□□□ -0.82
HSPG2-201ENST00000374673 LRCOL1A6NCL2 159 aa9.96□□□□□ -0.82
HSPG2-201ENST00000374673 NPSP0C0P6 89 aa9.96□□□□□ -0.82
HSPG2-201ENST00000374673 FAT2Q9NYQ8 4349 aa9.96□□□□□ -0.82
HSPG2-201ENST00000374673 IGLV4-3A0A075B6K6 122 aa9.95□□□□□ -0.82
HSPG2-201ENST00000374673 LINC00959A0A1B0GUT2 108 aa9.95□□□□□ -0.82
HSPG2-201ENST00000374673 IGIPA6NJ69 53 aa9.95□□□□□ -0.82
HSPG2-201ENST00000374673 RNASE13Q5GAN3 156 aaKnown RBP9.95□□□□□ -0.82
HSPG2-201ENST00000374673 OPRPNQ99935 248 aaPredicted RBP9.95□□□□□ -0.82
HSPG2-201ENST00000374673 CCL25O15444 150 aa9.94□□□□□ -0.82
HSPG2-201ENST00000374673 CHCHD10Q8WYQ3 142 aaPredicted RBP9.94□□□□□ -0.82
HSPG2-201ENST00000374673 CHCHD1Q96BP2 118 aaKnown RBP9.94□□□□□ -0.82
HSPG2-201ENST00000374673 TMEM141Q96I45 108 aa9.94□□□□□ -0.82
HSPG2-201ENST00000374673 TIMM17AQ99595 171 aa9.94□□□□□ -0.82
HSPG2-201ENST00000374673 A0A096LNJ9 63 aa9.93□□□□□ -0.82
HSPG2-201ENST00000374673 EREGO14944 169 aa9.93□□□□□ -0.82
HSPG2-201ENST00000374673 SS18Q15532 418 aa9.93□□□□□ -0.82
HSPG2-201ENST00000374673 WFDC2Q14508 124 aa9.92□□□□□ -0.82
HSPG2-201ENST00000374673 ERASQ7Z444 233 aa9.92□□□□□ -0.82
HSPG2-201ENST00000374673 BAALCQ8WXS3 180 aa9.92□□□□□ -0.82
HSPG2-201ENST00000374673 TRAV13-1A0A0B4J241 112 aa9.91□□□□□ -0.82
HSPG2-201ENST00000374673 GAGE12HA6NDE8 117 aa9.91□□□□□ -0.82
HSPG2-201ENST00000374673 C1orf196B1AJZ1 125 aa9.91□□□□□ -0.82
HSPG2-201ENST00000374673 HBDP02042 147 aa9.91□□□□□ -0.82
HSPG2-201ENST00000374673 PAPPA-AS1Q5QFB9 102 aa9.91□□□□□ -0.82
HSPG2-201ENST00000374673 Q6ZN92 141 aa9.91□□□□□ -0.82
HSPG2-201ENST00000374673 TEX43Q6ZNM6 134 aa9.91□□□□□ -0.82
HSPG2-201ENST00000374673 BAGE3Q86Y29 109 aa9.91□□□□□ -0.82
HSPG2-201ENST00000374673 SCGB3A1Q96QR1 104 aa9.91□□□□□ -0.82
HSPG2-201ENST00000374673 AMELXQ99217 191 aa9.91□□□□□ -0.82
HSPG2-201ENST00000374673 IFITM10A6NMD0 228 aa9.9□□□□□ -0.82
HSPG2-201ENST00000374673 LINC00173Q6ZV60 143 aa9.9□□□□□ -0.82
HSPG2-201ENST00000374673 Q8N814 137 aa9.9□□□□□ -0.82
HSPG2-201ENST00000374673 LECT2O14960 151 aa9.89□□□□□ -0.83
HSPG2-201ENST00000374673 XCL1P47992 114 aa9.89□□□□□ -0.83
HSPG2-201ENST00000374673 FOXI1Q12951 378 aa9.89□□□□□ -0.83
HSPG2-201ENST00000374673 PMCHL1Q16048 86 aa9.89□□□□□ -0.83
HSPG2-201ENST00000374673 CD164L2Q6UWJ8 174 aa9.89□□□□□ -0.83
HSPG2-201ENST00000374673 VCX2Q9H322 139 aa9.89□□□□□ -0.83
HSPG2-201ENST00000374673 USP17L23D6RBM5 183 aa9.88□□□□□ -0.83
HSPG2-201ENST00000374673 HIST1H2BKO60814 126 aa9.88□□□□□ -0.83
HSPG2-201ENST00000374673 HSBP1O75506 76 aa9.88□□□□□ -0.83
HSPG2-201ENST00000374673 HIST1H2BJP06899 126 aa9.88□□□□□ -0.83
HSPG2-201ENST00000374673 HIST1H2BOP23527 126 aa9.88□□□□□ -0.83
HSPG2-201ENST00000374673 HIST1H2BBP33778 126 aa9.88□□□□□ -0.83
HSPG2-201ENST00000374673 HIST1H2BDP58876 126 aa9.88□□□□□ -0.83
HSPG2-201ENST00000374673 LINC00310P59036 64 aa9.88□□□□□ -0.83
HSPG2-201ENST00000374673 HIST1H2BCP62807 126 aa9.88□□□□□ -0.83
HSPG2-201ENST00000374673 HIST2H2BEQ16778 126 aa9.88□□□□□ -0.83
HSPG2-201ENST00000374673 PDZD11Q5EBL8 140 aa9.88□□□□□ -0.83
HSPG2-201ENST00000374673 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.88□□□□□ -0.83
HSPG2-201ENST00000374673 SPATA12Q7Z6I5 190 aa9.88□□□□□ -0.83
HSPG2-201ENST00000374673 HIST1H2BHQ93079 126 aa9.88□□□□□ -0.83
HSPG2-201ENST00000374673 HIST1H2BNQ99877 126 aa9.88□□□□□ -0.83
HSPG2-201ENST00000374673 HIST1H2BMQ99879 126 aa9.88□□□□□ -0.83
HSPG2-201ENST00000374673 C2orf88Q9BSF0 95 aa9.88□□□□□ -0.83
HSPG2-201ENST00000374673 SERF1AO75920 110 aa9.87□□□□□ -0.83
HSPG2-201ENST00000374673 UBE2D1P51668 147 aa9.87□□□□□ -0.83
HSPG2-201ENST00000374673 KRTAP10-2P60368 255 aa9.87□□□□□ -0.83
HSPG2-201ENST00000374673 C14orf177Q52M58 125 aa9.87□□□□□ -0.83
HSPG2-201ENST00000374673 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.86□□□□□ -0.83
HSPG2-201ENST00000374673 ZC2HC1BQ5TFG8 222 aa9.86□□□□□ -0.83
HSPG2-201ENST00000374673 CDPF1Q6NVV7 123 aa9.86□□□□□ -0.83
HSPG2-201ENST00000374673 FAM19A3Q7Z5A8 133 aa9.86□□□□□ -0.83
HSPG2-201ENST00000374673 NTN5Q8WTR8 489 aaPredicted RBP9.86□□□□□ -0.83
HSPG2-201ENST00000374673 PKD1P98161 4303 aa9.86□□□□□ -0.83
HSPG2-201ENST00000374673 ATP5LO75964 103 aa9.85□□□□□ -0.83
HSPG2-201ENST00000374673 LINC00242Q5T6M2 205 aa9.85□□□□□ -0.83
HSPG2-201ENST00000374673 PGPEP1Q9NXJ5 209 aa9.85□□□□□ -0.83
HSPG2-201ENST00000374673 DNAH11Q96DT5 4516 aa9.85□□□□□ -0.83
HSPG2-201ENST00000374673 IGHV3OR16-9A0A0B4J2B5 98 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms