RNA–Protein interactions for RNA: ENST00000374342.6

PTPN20-203, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-203ENST00000374342 TMEM243Q9BU79 118 aa11.88□□□□□ -0.51
PTPN20-203ENST00000374342 TIMM21Q9BVV7 248 aa11.88□□□□□ -0.51
PTPN20-203ENST00000374342 RETNQ9HD89 108 aa11.88□□□□□ -0.51
PTPN20-203ENST00000374342 UBE2L6O14933 153 aa11.88□□□□□ -0.51
PTPN20-203ENST00000374342 MRPS36P82909 103 aaKnown RBP11.87□□□□□ -0.51
PTPN20-203ENST00000374342 BVES-AS1Q5T3Y7 98 aa11.87□□□□□ -0.51
PTPN20-203ENST00000374342 PRO0255Q9UI72 69 aa11.87□□□□□ -0.51
PTPN20-203ENST00000374342 TRBV25-1A0A075B6N4 114 aa11.86□□□□□ -0.51
PTPN20-203ENST00000374342 A8MZ25 164 aa11.86□□□□□ -0.51
PTPN20-203ENST00000374342 ZNF22P17026 224 aaPredicted RBP11.86□□□□□ -0.51
PTPN20-203ENST00000374342 COL6A5A8TX70 2615 aa11.86□□□□□ -0.51
PTPN20-203ENST00000374342 SPART-AS1P0CW21 52 aa11.85□□□□□ -0.51
PTPN20-203ENST00000374342 HSD52Q0P140 79 aa11.85□□□□□ -0.51
PTPN20-203ENST00000374342 AMMECR1LQ6DCA0 310 aa11.85□□□□□ -0.51
PTPN20-203ENST00000374342 SAMD5Q5TGI4 173 aa11.84□□□□□ -0.51
PTPN20-203ENST00000374342 HIGD1BQ9P298 99 aa11.84□□□□□ -0.51
PTPN20-203ENST00000374342 MYMXA0A1B0GTQ4 84 aa11.84□□□□□ -0.51
PTPN20-203ENST00000374342 TMEM223A0PJW6 202 aa11.84□□□□□ -0.51
PTPN20-203ENST00000374342 PAX4O43316 350 aa11.84□□□□□ -0.51
PTPN20-203ENST00000374342 ATP5G1P05496 136 aa11.84□□□□□ -0.51
PTPN20-203ENST00000374342 SMAGPQ0VAQ4 97 aa11.84□□□□□ -0.51
PTPN20-203ENST00000374342 OR5A1Q8NGJ0 315 aa11.84□□□□□ -0.51
PTPN20-203ENST00000374342 TRBV6-8A0A0A6YYG3 113 aa11.83□□□□□ -0.52
PTPN20-203ENST00000374342 ZNF815PA8K554 130 aa11.83□□□□□ -0.52
PTPN20-203ENST00000374342 IGHV3-64A0A075B6Q5 118 aa11.82□□□□□ -0.52
PTPN20-203ENST00000374342 A0A0J9YY99 117 aa11.82□□□□□ -0.52
PTPN20-203ENST00000374342 HTN3P15516 51 aa11.82□□□□□ -0.52
PTPN20-203ENST00000374342 ZNF25P17030 456 aaPredicted RBP11.82□□□□□ -0.52
PTPN20-203ENST00000374342 UBE2D1P51668 147 aa11.82□□□□□ -0.52
PTPN20-203ENST00000374342 TSPEAR-AS2P59090 65 aa11.82□□□□□ -0.52
PTPN20-203ENST00000374342 GAGE6Q13070 117 aa11.82□□□□□ -0.52
PTPN20-203ENST00000374342 ATP6V0E2Q8NHE4 81 aa11.82□□□□□ -0.52
PTPN20-203ENST00000374342 CSDC2Q9Y534 153 aaKnown RBP11.82□□□□□ -0.52
PTPN20-203ENST00000374342 A0A096LPF7 62 aa11.82□□□□□ -0.52
PTPN20-203ENST00000374342 TINCRA0A1B0GVN0 87 aa11.82□□□□□ -0.52
PTPN20-203ENST00000374342 TMEM101Q96IK0 257 aa11.82□□□□□ -0.52
PTPN20-203ENST00000374342 CHCHD5Q9BSY4 110 aa11.82□□□□□ -0.52
PTPN20-203ENST00000374342 F5H768 121 aa11.8□□□□□ -0.52
PTPN20-203ENST00000374342 H7C423 109 aa11.8□□□□□ -0.52
PTPN20-203ENST00000374342 LINC00469Q8N7U9 141 aa11.8□□□□□ -0.52
PTPN20-203ENST00000374342 GEMIN7Q9H840 131 aaKnown RBP11.8□□□□□ -0.52
PTPN20-203ENST00000374342 J3QQQ9 107 aa11.8□□□□□ -0.52
PTPN20-203ENST00000374342 LGALS3P17931 250 aaKnown RBP11.8□□□□□ -0.52
PTPN20-203ENST00000374342 VSIG2Q96IQ7 327 aa11.8□□□□□ -0.52
PTPN20-203ENST00000374342 TRAV26-1A0A087WT03 109 aa11.79□□□□□ -0.52
PTPN20-203ENST00000374342 TEX48A0A1B0GUV7 120 aa11.79□□□□□ -0.52
PTPN20-203ENST00000374342 LEPROTO15243 131 aa11.79□□□□□ -0.52
PTPN20-203ENST00000374342 CDC42SE2Q9NRR3 84 aa11.79□□□□□ -0.52
PTPN20-203ENST00000374342 SCGB1D4Q6XE38 83 aa11.78□□□□□ -0.52
PTPN20-203ENST00000374342 ORAOV1Q8WV07 137 aa11.78□□□□□ -0.52
PTPN20-203ENST00000374342 PLEKHB2Q96CS7 222 aa11.78□□□□□ -0.52
PTPN20-203ENST00000374342 TRAV13-1A0A0B4J241 112 aa11.78□□□□□ -0.52
PTPN20-203ENST00000374342 PRB2P02812 416 aaPredicted RBP11.78□□□□□ -0.52
PTPN20-203ENST00000374342 GCSHP23434 173 aa11.78□□□□□ -0.52
PTPN20-203ENST00000374342 SEC11AP67812 179 aa11.78□□□□□ -0.52
PTPN20-203ENST00000374342 DNAH3Q8TD57 4116 aa11.77□□□□□ -0.53
PTPN20-203ENST00000374342 TRAV8-3A0A0A6YYJ7 113 aa11.76□□□□□ -0.53
PTPN20-203ENST00000374342 SPINK8P0C7L1 97 aa11.76□□□□□ -0.53
PTPN20-203ENST00000374342 Q6ZVH6 145 aa11.76□□□□□ -0.53
PTPN20-203ENST00000374342 ANK2Q01484 3957 aa11.76□□□□□ -0.53
PTPN20-203ENST00000374342 TIRAPP58753 221 aa11.75□□□□□ -0.53
PTPN20-203ENST00000374342 C12orf74Q32Q52 190 aa11.75□□□□□ -0.53
PTPN20-203ENST00000374342 LINC00242Q5T6M2 205 aa11.75□□□□□ -0.53
PTPN20-203ENST00000374342 HIST1H4GQ99525 98 aa11.75□□□□□ -0.53
PTPN20-203ENST00000374342 CDKN2A-AS1Q9UH64 79 aa11.75□□□□□ -0.53
PTPN20-203ENST00000374342 IGLV4-60A0A075B6I1 120 aa11.74□□□□□ -0.53
PTPN20-203ENST00000374342 IGLV5-45A0A087WSX0 123 aa11.74□□□□□ -0.53
PTPN20-203ENST00000374342 IGHV3-30-3P0DP02 117 aa11.74□□□□□ -0.53
PTPN20-203ENST00000374342 HERVK_113P63121 156 aa11.74□□□□□ -0.53
PTPN20-203ENST00000374342 COX6A2Q02221 97 aa11.74□□□□□ -0.53
PTPN20-203ENST00000374342 C11orf68Q9H3H3 251 aaKnown RBP11.74□□□□□ -0.53
PTPN20-203ENST00000374342 A6NDN8 102 aa11.74□□□□□ -0.53
PTPN20-203ENST00000374342 H3BRM9 83 aa11.74□□□□□ -0.53
PTPN20-203ENST00000374342 FXYD2P54710 66 aa11.74□□□□□ -0.53
PTPN20-203ENST00000374342 CEND1Q8N111 149 aa11.74□□□□□ -0.53
PTPN20-203ENST00000374342 MDFIQ99750 246 aa11.74□□□□□ -0.53
PTPN20-203ENST00000374342 IGHV1-58A0A0C4DH39 117 aa11.73□□□□□ -0.53
PTPN20-203ENST00000374342 IGKV3OR2-268A0A0C4DH90 116 aa11.73□□□□□ -0.53
PTPN20-203ENST00000374342 TAL2Q16559 108 aa11.73□□□□□ -0.53
PTPN20-203ENST00000374342 FAM19A3Q7Z5A8 133 aa11.73□□□□□ -0.53
PTPN20-203ENST00000374342 K7EP13 123 aa11.72□□□□□ -0.53
PTPN20-203ENST00000374342 TAX1BP3O14907 124 aa11.72□□□□□ -0.53
PTPN20-203ENST00000374342 PTTG1IPP53801 180 aa11.72□□□□□ -0.53
PTPN20-203ENST00000374342 ICOSQ9Y6W8 199 aa11.72□□□□□ -0.53
PTPN20-203ENST00000374342 NOTCH1P46531 2555 aa11.71□□□□□ -0.53
PTPN20-203ENST00000374342 A0A0J9YWU9 116 aa11.71□□□□□ -0.53
PTPN20-203ENST00000374342 TMEM262E9PQX1 116 aa11.71□□□□□ -0.53
PTPN20-203ENST00000374342 MRPL23Q16540 153 aaKnown RBP11.71□□□□□ -0.53
PTPN20-203ENST00000374342 COX11Q9Y6N1 276 aa11.71□□□□□ -0.53
PTPN20-203ENST00000374342 K7EIL1 84 aa11.7□□□□□ -0.54
PTPN20-203ENST00000374342 TM2D2Q9BX73 214 aa11.7□□□□□ -0.54
PTPN20-203ENST00000374342 RBX1P62877 108 aa11.69□□□□□ -0.54
PTPN20-203ENST00000374342 Q6ZTC4 211 aa11.69□□□□□ -0.54
PTPN20-203ENST00000374342 SRSF9Q13242 221 aaKnown RBP eCLIP11.68□□□□□ -0.54
PTPN20-203ENST00000374342 TENM3Q9P273 2699 aa11.68□□□□□ -0.54
PTPN20-203ENST00000374342 C10orf126Q8N4M7 172 aa11.68□□□□□ -0.54
PTPN20-203ENST00000374342 NHP2Q9NX24 153 aaKnown RBP11.68□□□□□ -0.54
PTPN20-203ENST00000374342 NDUFA12Q9UI09 145 aa11.68□□□□□ -0.54
PTPN20-203ENST00000374342 LURAP1LQ8IV03 231 aa11.67□□□□□ -0.54
PTPN20-203ENST00000374342 SMIM1B2RUZ4 78 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms