RNA–Protein interactions for RNA: ENST00000373057.7

FOXP4-202, Transcript of forkhead box P4, humanhuman

TSL 1 (best) BASIC

Gene FOXP4, Length 3,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP4-202ENST00000373057 TRGV11A0A075B6L2 103 aa13.72□□□□□ -0.21
FOXP4-202ENST00000373057 A0A1W2PRX2 142 aa13.72□□□□□ -0.21
FOXP4-202ENST00000373057 POM121L12Q8N7R1 296 aa13.72□□□□□ -0.21
FOXP4-202ENST00000373057 KLK9Q2XQG4 91 aa13.72□□□□□ -0.21
FOXP4-202ENST00000373057 VPREB3Q9UKI3 123 aa13.72□□□□□ -0.21
FOXP4-202ENST00000373057 IGSF10Q6WRI0 2623 aa13.71□□□□□ -0.21
FOXP4-202ENST00000373057 PSMB8P28062 276 aa13.71□□□□□ -0.21
FOXP4-202ENST00000373057 H3BUA1 57 aa13.7□□□□□ -0.22
FOXP4-202ENST00000373057 A0A0B4J2C4 111 aa13.69□□□□□ -0.22
FOXP4-202ENST00000373057 IGHV1-58A0A0C4DH39 117 aa13.69□□□□□ -0.22
FOXP4-202ENST00000373057 DYNLRB2Q8TF09 96 aa13.69□□□□□ -0.22
FOXP4-202ENST00000373057 B4DSR2 109 aa13.69□□□□□ -0.22
FOXP4-202ENST00000373057 K7EMT4 169 aa13.69□□□□□ -0.22
FOXP4-202ENST00000373057 Q9H8V8 135 aa13.69□□□□□ -0.22
FOXP4-202ENST00000373057 TMEM61Q8N0U2 210 aa13.68□□□□□ -0.22
FOXP4-202ENST00000373057 TRGV1A0A0A0MS02 117 aa13.67□□□□□ -0.22
FOXP4-202ENST00000373057 H7C423 109 aa13.67□□□□□ -0.22
FOXP4-202ENST00000373057 RS1O15537 224 aa13.67□□□□□ -0.22
FOXP4-202ENST00000373057 TOMM7Q9P0U1 55 aa13.67□□□□□ -0.22
FOXP4-202ENST00000373057 TRBV10-2A0A0K0K1G8 114 aa13.67□□□□□ -0.22
FOXP4-202ENST00000373057 NOTCH2Q04721 2471 aa13.67□□□□□ -0.22
FOXP4-202ENST00000373057 VSIG2Q96IQ7 327 aa13.66□□□□□ -0.22
FOXP4-202ENST00000373057 NDUFV3P56181 108 aaKnown RBP13.66□□□□□ -0.22
FOXP4-202ENST00000373057 COX6A2Q02221 97 aa13.65□□□□□ -0.22
FOXP4-202ENST00000373057 RBMY1BA6NDE4 496 aaKnown RBP13.65□□□□□ -0.22
FOXP4-202ENST00000373057 RBMY1EA6NEQ0 496 aaKnown RBP13.65□□□□□ -0.22
FOXP4-202ENST00000373057 RBMY1DP0C7P1 496 aaKnown RBP13.65□□□□□ -0.22
FOXP4-202ENST00000373057 IFITM1P13164 125 aa13.65□□□□□ -0.22
FOXP4-202ENST00000373057 C5orf47Q569G3 176 aa13.65□□□□□ -0.22
FOXP4-202ENST00000373057 SBSPONQ8IVN8 264 aa13.65□□□□□ -0.22
FOXP4-202ENST00000373057 NBEAL2Q6ZNJ1 2754 aa13.64□□□□□ -0.23
FOXP4-202ENST00000373057 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.64□□□□□ -0.23
FOXP4-202ENST00000373057 LITAFQ99732 161 aa13.64□□□□□ -0.23
FOXP4-202ENST00000373057 MIAQ16674 131 aa13.63□□□□□ -0.23
FOXP4-202ENST00000373057 PRIMA1Q86XR5 153 aa13.63□□□□□ -0.23
FOXP4-202ENST00000373057 MRPS36P82909 103 aaKnown RBP13.62□□□□□ -0.23
FOXP4-202ENST00000373057 ODF3Q96PU9 254 aa13.62□□□□□ -0.23
FOXP4-202ENST00000373057 CHCHD5Q9BSY4 110 aa13.62□□□□□ -0.23
FOXP4-202ENST00000373057 UBE2D4Q9Y2X8 147 aa13.62□□□□□ -0.23
FOXP4-202ENST00000373057 LOC107984640A0A0U1RRK4 108 aa13.62□□□□□ -0.23
FOXP4-202ENST00000373057 FAM104AQ969W3 186 aa13.62□□□□□ -0.23
FOXP4-202ENST00000373057 C11orf68Q9H3H3 251 aaKnown RBP13.62□□□□□ -0.23
FOXP4-202ENST00000373057 HIVEP2P31629 2446 aa13.61□□□□□ -0.23
FOXP4-202ENST00000373057 ZNF415Q09FC8 603 aa13.61□□□□□ -0.23
FOXP4-202ENST00000373057 CHCHD7Q9BUK0 85 aa13.61□□□□□ -0.23
FOXP4-202ENST00000373057 NHLRC4P0CG21 123 aaPredicted RBP13.61□□□□□ -0.23
FOXP4-202ENST00000373057 LINC00694P0DN24 101 aa13.61□□□□□ -0.23
FOXP4-202ENST00000373057 CIRBPQ14011 172 aaKnown RBP13.61□□□□□ -0.23
FOXP4-202ENST00000373057 PIK3CD-AS1Q5SR53 167 aa13.61□□□□□ -0.23
FOXP4-202ENST00000373057 TMEM101Q96IK0 257 aa13.61□□□□□ -0.23
FOXP4-202ENST00000373057 TRBV30A0A0K0K1B3 111 aa13.61□□□□□ -0.23
FOXP4-202ENST00000373057 CSDC2Q9Y534 153 aaKnown RBP13.59□□□□□ -0.23
FOXP4-202ENST00000373057 Q9HAA7 133 aa13.59□□□□□ -0.23
FOXP4-202ENST00000373057 Q8N2B8 174 aa13.58□□□□□ -0.24
FOXP4-202ENST00000373057 TINCRA0A1B0GVN0 87 aa13.56□□□□□ -0.24
FOXP4-202ENST00000373057 PLA2G2AP14555 144 aa13.54□□□□□ -0.24
FOXP4-202ENST00000373057 Q6ZTI0 123 aa13.54□□□□□ -0.24
FOXP4-202ENST00000373057 LINC00308Q8TCZ7 52 aa13.54□□□□□ -0.24
FOXP4-202ENST00000373057 MAP6D1Q9H9H5 199 aa13.54□□□□□ -0.24
FOXP4-202ENST00000373057 SPANXA1Q9NS26 97 aa13.54□□□□□ -0.24
FOXP4-202ENST00000373057 PYGO1Q9Y3Y4 419 aa13.54□□□□□ -0.24
FOXP4-202ENST00000373057 LST1O00453 97 aa13.53□□□□□ -0.24
FOXP4-202ENST00000373057 PRB1P04280 392 aa13.53□□□□□ -0.24
FOXP4-202ENST00000373057 LINC01356Q8N9X3 169 aa13.53□□□□□ -0.24
FOXP4-202ENST00000373057 STHQ8IWL8 128 aa13.52□□□□□ -0.24
FOXP4-202ENST00000373057 CITED2Q99967 270 aaPredicted RBP13.52□□□□□ -0.24
FOXP4-202ENST00000373057 TRAV25A0A0B4J276 109 aa13.52□□□□□ -0.25
FOXP4-202ENST00000373057 INSP01308 110 aa13.52□□□□□ -0.25
FOXP4-202ENST00000373057 GCN1Q92616 2671 aaKnown RBP13.51□□□□□ -0.25
FOXP4-202ENST00000373057 FAM236AA0A1B0GUQ0 79 aa13.51□□□□□ -0.25
FOXP4-202ENST00000373057 FAM236BA0A1B0GV22 79 aa13.51□□□□□ -0.25
FOXP4-202ENST00000373057 UBE2L6O14933 153 aa13.51□□□□□ -0.25
FOXP4-202ENST00000373057 SOSTDC1Q6X4U4 206 aa13.51□□□□□ -0.25
FOXP4-202ENST00000373057 LOC100131303A0A0U1RQF7 123 aa13.51□□□□□ -0.25
FOXP4-202ENST00000373057 SMIM9A6NGZ8 99 aa13.51□□□□□ -0.25
FOXP4-202ENST00000373057 RPL35AP18077 110 aaKnown RBP13.51□□□□□ -0.25
FOXP4-202ENST00000373057 PFN2P35080 140 aa13.51□□□□□ -0.25
FOXP4-202ENST00000373057 LINC00242Q5T6M2 205 aa13.51□□□□□ -0.25
FOXP4-202ENST00000373057 GAGE2AQ6NT46 116 aa13.51□□□□□ -0.25
FOXP4-202ENST00000373057 WFDC10AQ9H1F0 79 aa13.51□□□□□ -0.25
FOXP4-202ENST00000373057 NOP10Q9NPE3 64 aaKnown RBP13.51□□□□□ -0.25
FOXP4-202ENST00000373057 SPANXDQ9BXN6 97 aa13.51□□□□□ -0.25
FOXP4-202ENST00000373057 ZNF702PQ9H963 129 aa13.51□□□□□ -0.25
FOXP4-202ENST00000373057 SPANXCQ9NY87 97 aa13.51□□□□□ -0.25
FOXP4-202ENST00000373057 TRGV2A0A075B6R0 118 aa13.5□□□□□ -0.25
FOXP4-202ENST00000373057 EDA2RQ9HAV5 297 aa13.5□□□□□ -0.25
FOXP4-202ENST00000373057 OR13C6PQ8NH95 151 aa13.49□□□□□ -0.25
FOXP4-202ENST00000373057 DAZ2Q13117 558 aaKnown RBP13.49□□□□□ -0.25
FOXP4-202ENST00000373057 DAZ4Q86SG3 579 aaKnown RBP13.49□□□□□ -0.25
FOXP4-202ENST00000373057 DAZ3Q9NR90 486 aaKnown RBP13.49□□□□□ -0.25
FOXP4-202ENST00000373057 H3BT86 120 aa13.48□□□□□ -0.25
FOXP4-202ENST00000373057 BAALC-AS2P0C853 105 aa13.48□□□□□ -0.25
FOXP4-202ENST00000373057 LINC00158P58513 81 aa13.48□□□□□ -0.25
FOXP4-202ENST00000373057 RPL36AP83881 106 aaKnown RBP13.48□□□□□ -0.25
FOXP4-202ENST00000373057 RPL36ALQ969Q0 106 aaKnown RBP13.48□□□□□ -0.25
FOXP4-202ENST00000373057 TMEM89A2RUT3 159 aa13.47□□□□□ -0.25
FOXP4-202ENST00000373057 FLNAP21333 2647 aaKnown RBP13.47□□□□□ -0.25
FOXP4-202ENST00000373057 ATP5G1P05496 136 aa13.47□□□□□ -0.25
FOXP4-202ENST00000373057 NDUFA1O15239 70 aa13.46□□□□□ -0.26
FOXP4-202ENST00000373057 CLPSL2Q6UWE3 100 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 161.9 ms