RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 PROK1P58294 105 aa8.54□□□□□ -1.04
VCL-202ENST00000372755 PPDPFQ9H3Y8 114 aa8.53□□□□□ -1.04
VCL-202ENST00000372755 CACNA1HO95180 2353 aa8.53□□□□□ -1.04
VCL-202ENST00000372755 TSHBP01222 138 aa8.53□□□□□ -1.04
VCL-202ENST00000372755 TP73-AS1Q9UF72 201 aa8.53□□□□□ -1.04
VCL-202ENST00000372755 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.53□□□□□ -1.045e-7■■■■□ 21.9
VCL-202ENST00000372755 COX17Q14061 63 aa8.53□□□□□ -1.04
VCL-202ENST00000372755 Q6ZQY7 126 aa8.53□□□□□ -1.04
VCL-202ENST00000372755 ZNF295-AS1Q8N0V1 137 aa8.53□□□□□ -1.04
VCL-202ENST00000372755 MUC7Q8TAX7 377 aa8.53□□□□□ -1.04
VCL-202ENST00000372755 KPRPQ5T749 579 aaPredicted RBP8.53□□□□□ -1.04
VCL-202ENST00000372755 ZNF702PQ9H963 129 aa8.53□□□□□ -1.04
VCL-202ENST00000372755 LINC00474Q9P2X8 69 aa8.53□□□□□ -1.04
VCL-202ENST00000372755 MRPS36P82909 103 aaKnown RBP8.52□□□□□ -1.04
VCL-202ENST00000372755 WFDC13Q8IUB5 93 aa8.52□□□□□ -1.04
VCL-202ENST00000372755 C9orf85Q96MD7 179 aa8.52□□□□□ -1.04
VCL-202ENST00000372755 IMUPQ9GZP8 106 aa8.52□□□□□ -1.04
VCL-202ENST00000372755 C11orf71Q6IPW1 123 aa8.52□□□□□ -1.05
VCL-202ENST00000372755 SERP2Q8N6R1 65 aa8.52□□□□□ -1.05
VCL-202ENST00000372755 A0A0J9YWU9 116 aa8.52□□□□□ -1.05
VCL-202ENST00000372755 LINC00959A0A1B0GUT2 108 aa8.52□□□□□ -1.05
VCL-202ENST00000372755 MRPS12O15235 138 aaKnown RBP8.52□□□□□ -1.05
VCL-202ENST00000372755 PLA2G5P39877 138 aa8.52□□□□□ -1.05
VCL-202ENST00000372755 UBE2D3P61077 147 aa8.52□□□□□ -1.05
VCL-202ENST00000372755 Q6ZPA2 131 aa8.51□□□□□ -1.05
VCL-202ENST00000372755 LY6G6DO95868 133 aa8.5□□□□□ -1.05
VCL-202ENST00000372755 IGLV2-18A0A075B6J9 118 aa8.5□□□□□ -1.05
VCL-202ENST00000372755 HRCT1Q6UXD1 115 aa8.5□□□□□ -1.05
VCL-202ENST00000372755 C10orf99Q6UWK7 81 aa8.5□□□□□ -1.05
VCL-202ENST00000372755 PLAC8L1A1L4L8 177 aa8.5□□□□□ -1.05
VCL-202ENST00000372755 LST1O00453 97 aa8.5□□□□□ -1.05
VCL-202ENST00000372755 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.5□□□□□ -1.05
VCL-202ENST00000372755 ZNF73O43830 326 aaPredicted RBP8.49□□□□□ -1.05
VCL-202ENST00000372755 RNASE3P12724 160 aaKnown RBP8.49□□□□□ -1.05
VCL-202ENST00000372755 IGLV2-11P01706 119 aa8.49□□□□□ -1.05
VCL-202ENST00000372755 NRACQ8N912 160 aa8.49□□□□□ -1.05
VCL-202ENST00000372755 A6NED7 52 aa8.48□□□□□ -1.05
VCL-202ENST00000372755 A8MZ25 164 aa8.48□□□□□ -1.05
VCL-202ENST00000372755 MRGPRG-AS1Q2M3A8 158 aa8.48□□□□□ -1.05
VCL-202ENST00000372755 CLUHP3Q96NS8 147 aa8.48□□□□□ -1.05
VCL-202ENST00000372755 KLLNB2CW77 178 aa8.48□□□□□ -1.05
VCL-202ENST00000372755 Q8N6K4 173 aa8.48□□□□□ -1.05
VCL-202ENST00000372755 LINC01006Q8NI28 216 aa8.48□□□□□ -1.05
VCL-202ENST00000372755 SMIM11BQ8TCY0 68 aa8.48□□□□□ -1.05
VCL-202ENST00000372755 M0R2N4 97 aa8.48□□□□□ -1.05
VCL-202ENST00000372755 NDUFA7O95182 113 aa8.48□□□□□ -1.05
VCL-202ENST00000372755 A0A0U1RQV1 116 aa8.48□□□□□ -1.05
VCL-202ENST00000372755 C22orf34Q6ZV56 151 aa8.48□□□□□ -1.05
VCL-202ENST00000372755 NBASA2RRP1 2371 aa8.48□□□□□ -1.05
VCL-202ENST00000372755 Q8IZM0 81 aa8.48□□□□□ -1.05
VCL-202ENST00000372755 SNURFQ9Y675 71 aa8.48□□□□□ -1.05
VCL-202ENST00000372755 ZGRF1Q86YA3 2104 aa8.47□□□□□ -1.05
VCL-202ENST00000372755 IGLV9-49A0A0B4J1Y8 123 aa8.47□□□□□ -1.05
VCL-202ENST00000372755 DENND4CQ5VZ89 1909 aa8.47□□□□□ -1.05
VCL-202ENST00000372755 RPL37AP8A6NKH3 93 aa8.47□□□□□ -1.05
VCL-202ENST00000372755 LOC100131303A0A0U1RQF7 123 aa8.47□□□□□ -1.05
VCL-202ENST00000372755 CRIP3Q6Q6R5 217 aa8.47□□□□□ -1.05
VCL-202ENST00000372755 LINC00526Q96FQ7 95 aa8.47□□□□□ -1.05
VCL-202ENST00000372755 OBSL1O75147 1896 aa8.46□□□□□ -1.05
VCL-202ENST00000372755 UBE2D2P62837 147 aa8.46□□□□□ -1.05
VCL-202ENST00000372755 ZNF843Q8N446 348 aa8.46□□□□□ -1.05
VCL-202ENST00000372755 LY6G6CO95867 125 aa8.46□□□□□ -1.06
VCL-202ENST00000372755 IGLV1-40P01703 118 aa8.46□□□□□ -1.06
VCL-202ENST00000372755 NOTCH4Q99466 2003 aa8.45□□□□□ -1.06
VCL-202ENST00000372755 POLR2KP53803 58 aaKnown RBP8.45□□□□□ -1.06
VCL-202ENST00000372755 C10orf25Q5T742 122 aa8.45□□□□□ -1.06
VCL-202ENST00000372755 TMEM131Q92545 1883 aa8.45□□□□□ -1.06
VCL-202ENST00000372755 COL4A3Q01955 1670 aa8.45□□□□□ -1.06
VCL-202ENST00000372755 PRR9Q5T870 116 aa8.45□□□□□ -1.06
VCL-202ENST00000372755 Q6JHZ5 121 aa8.45□□□□□ -1.06
VCL-202ENST00000372755 COX7CP15954 63 aa8.44□□□□□ -1.06
VCL-202ENST00000372755 PLXNB3Q9ULL4 1909 aa8.44□□□□□ -1.06
VCL-202ENST00000372755 WFDC10AQ9H1F0 79 aa8.43□□□□□ -1.06
VCL-202ENST00000372755 PCNX1Q96RV3 2341 aa8.43□□□□□ -1.06
VCL-202ENST00000372755 RPL28P46779 137 aaKnown RBP8.43□□□□□ -1.06
VCL-202ENST00000372755 CDC42SE2Q9NRR3 84 aa8.43□□□□□ -1.06
VCL-202ENST00000372755 FAM30AQ9NZY2 134 aa8.43□□□□□ -1.06
VCL-202ENST00000372755 C11orf21Q9P2W6 132 aa8.43□□□□□ -1.06
VCL-202ENST00000372755 PRR4Q16378 134 aa8.42□□□□□ -1.06
VCL-202ENST00000372755 CYSRT1A8MQ03 144 aa8.42□□□□□ -1.06
VCL-202ENST00000372755 C18orf65Q6ZTR6 163 aa8.42□□□□□ -1.06
VCL-202ENST00000372755 NANOS2P60321 138 aaKnown RBP8.41□□□□□ -1.06
VCL-202ENST00000372755 C2orf91Q6ZV80 131 aa8.41□□□□□ -1.06
VCL-202ENST00000372755 YPEL4Q96NS1 127 aa8.41□□□□□ -1.06
VCL-202ENST00000372755 CHCHD7Q9BUK0 85 aa8.41□□□□□ -1.06
VCL-202ENST00000372755 Q6ZVQ6 151 aa8.41□□□□□ -1.06
VCL-202ENST00000372755 EGFEM1PQ0D2K5 195 aa8.41□□□□□ -1.06
VCL-202ENST00000372755 PLCE1Q9P212 2302 aa8.4□□□□□ -1.06
VCL-202ENST00000372755 DENND4AQ7Z401 1863 aa8.4□□□□□ -1.06
VCL-202ENST00000372755 IGHV4-30-4P0DP06 118 aa8.4□□□□□ -1.06
VCL-202ENST00000372755 SHANK1Q9Y566 2161 aa8.4□□□□□ -1.06
VCL-202ENST00000372755 M0QXV9 152 aa8.4□□□□□ -1.07
VCL-202ENST00000372755 NTM-AS1Q6ZSK4 140 aa8.4□□□□□ -1.07
VCL-202ENST00000372755 NUPR2A6NF83 97 aa8.4□□□□□ -1.07
VCL-202ENST00000372755 Q6ZS46 218 aa8.4□□□□□ -1.07
VCL-202ENST00000372755 POM121L12Q8N7R1 296 aa8.4□□□□□ -1.07
VCL-202ENST00000372755 CNFNQ9BYD5 112 aa8.38□□□□□ -1.07
VCL-202ENST00000372755 KIF26AQ9ULI4 1882 aaPredicted RBP8.38□□□□□ -1.07
VCL-202ENST00000372755 HIVEP2P31629 2446 aa8.38□□□□□ -1.07
VCL-202ENST00000372755 ESRGQ1W209 222 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms