RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 GAGE13Q4V321 117 aa17.75■□□□□ 0.43
CTSA-203ENST00000372459 TRRAPQ9Y4A5 3859 aa17.75■□□□□ 0.43
CTSA-203ENST00000372459 HIST1H4GQ99525 98 aa17.75■□□□□ 0.43
CTSA-203ENST00000372459 DEFB135Q30KP9 77 aa17.74■□□□□ 0.43
CTSA-203ENST00000372459 SHISA2Q6UWI4 295 aa17.74■□□□□ 0.43
CTSA-203ENST00000372459 NFE4Q86UQ8 179 aa17.74■□□□□ 0.43
CTSA-203ENST00000372459 LINC00612Q8N6U2 182 aa17.74■□□□□ 0.43
CTSA-203ENST00000372459 HERVK_113P61574 105 aa17.73■□□□□ 0.43
CTSA-203ENST00000372459 AMELXQ99217 191 aa17.73■□□□□ 0.43
CTSA-203ENST00000372459 FHL2Q14192 279 aa17.73■□□□□ 0.43
CTSA-203ENST00000372459 CEMP1Q6PRD7 247 aaPredicted RBP17.73■□□□□ 0.43
CTSA-203ENST00000372459 PRADC1Q9BSG0 188 aa17.73■□□□□ 0.43
CTSA-203ENST00000372459 DEFB130BP0DP73 79 aa17.72■□□□□ 0.43
CTSA-203ENST00000372459 DEFB130AP0DP74 79 aa17.72■□□□□ 0.43
CTSA-203ENST00000372459 FAM104AQ969W3 186 aa17.72■□□□□ 0.43
CTSA-203ENST00000372459 BAHCC1Q9P281 2608 aa17.72■□□□□ 0.43
CTSA-203ENST00000372459 TMEM170BQ5T4T1 132 aa17.71■□□□□ 0.43
CTSA-203ENST00000372459 VPS25Q9BRG1 176 aa17.71■□□□□ 0.43
CTSA-203ENST00000372459 A0A1B0GWB2 263 aa17.71■□□□□ 0.43
CTSA-203ENST00000372459 IGHV4-30-4P0DP06 118 aa17.71■□□□□ 0.43
CTSA-203ENST00000372459 C12orf74Q32Q52 190 aa17.71■□□□□ 0.43
CTSA-203ENST00000372459 IGLL5B9A064 214 aa17.7■□□□□ 0.42
CTSA-203ENST00000372459 PRIMA1Q86XR5 153 aa17.7■□□□□ 0.42
CTSA-203ENST00000372459 TIMM21Q9BVV7 248 aa17.69■□□□□ 0.42
CTSA-203ENST00000372459 LYRM9A8MSI8 78 aa17.68■□□□□ 0.42
CTSA-203ENST00000372459 OXLD1Q5BKU9 147 aa17.68■□□□□ 0.42
CTSA-203ENST00000372459 GTSF1LQ9H1H1 148 aa17.68■□□□□ 0.42
CTSA-203ENST00000372459 LOC100131303A0A0U1RQF7 123 aa17.67■□□□□ 0.42
CTSA-203ENST00000372459 NTM-AS1Q6ZSK4 140 aa17.67■□□□□ 0.42
CTSA-203ENST00000372459 A0A0J9YXV3 536 aa17.66■□□□□ 0.42
CTSA-203ENST00000372459 ZNF815PA8K554 130 aa17.66■□□□□ 0.42
CTSA-203ENST00000372459 MRPS36P82909 103 aaKnown RBP17.66■□□□□ 0.42
CTSA-203ENST00000372459 FAM222AQ5U5X8 452 aa17.66■□□□□ 0.42
CTSA-203ENST00000372459 DGAT2L7PQ6IED9 249 aa17.66■□□□□ 0.42
CTSA-203ENST00000372459 Q6ZUT4 128 aa17.66■□□□□ 0.42
CTSA-203ENST00000372459 C21orf62-AS1Q17RA5 79 aa17.65■□□□□ 0.42
CTSA-203ENST00000372459 RNASE13Q5GAN3 156 aaKnown RBP17.65■□□□□ 0.42
CTSA-203ENST00000372459 G3V4G9 280 aa17.64■□□□□ 0.41
CTSA-203ENST00000372459 MIFP14174 115 aa17.64■□□□□ 0.41
CTSA-203ENST00000372459 ZNF22P17026 224 aaPredicted RBP17.64■□□□□ 0.41
CTSA-203ENST00000372459 IGHV4-28A0A0C4DH34 117 aa17.63■□□□□ 0.41
CTSA-203ENST00000372459 SMAGPQ0VAQ4 97 aa17.63■□□□□ 0.41
CTSA-203ENST00000372459 TMEM223A0PJW6 202 aa17.62■□□□□ 0.41
CTSA-203ENST00000372459 SBSPONQ8IVN8 264 aa17.62■□□□□ 0.41
CTSA-203ENST00000372459 RNF183Q96D59 192 aa17.62■□□□□ 0.41
CTSA-203ENST00000372459 CSDC2Q9Y534 153 aaKnown RBP17.62■□□□□ 0.41
CTSA-203ENST00000372459 TMEM238LA0A1B0GVL6 79 aa17.61■□□□□ 0.41
CTSA-203ENST00000372459 A6NJY4 79 aa17.61■□□□□ 0.41
CTSA-203ENST00000372459 LINC00694P0DN24 101 aa17.61■□□□□ 0.41
CTSA-203ENST00000372459 KRTAP10-11P60412 298 aa17.61■□□□□ 0.41
CTSA-203ENST00000372459 TMEM243Q9BU79 118 aa17.61■□□□□ 0.41
CTSA-203ENST00000372459 SCGB1D4Q6XE38 83 aa17.6■□□□□ 0.41
CTSA-203ENST00000372459 FBN1P35555 2871 aaKnown RBP17.6■□□□□ 0.41
CTSA-203ENST00000372459 TINCRA0A1B0GVN0 87 aa17.6■□□□□ 0.41
CTSA-203ENST00000372459 EGFEM1PQ0D2K5 195 aa17.6■□□□□ 0.41
CTSA-203ENST00000372459 Q8NAQ8 132 aa17.6■□□□□ 0.41
CTSA-203ENST00000372459 UBE2L6O14933 153 aa17.59■□□□□ 0.41
CTSA-203ENST00000372459 DEFB4AO15263 64 aa17.59■□□□□ 0.41
CTSA-203ENST00000372459 PLEKHB2Q96CS7 222 aa17.59■□□□□ 0.41
CTSA-203ENST00000372459 PRO0255Q9UI72 69 aa17.58■□□□□ 0.4
CTSA-203ENST00000372459 F8W1H4 67 aa17.57■□□□□ 0.4
CTSA-203ENST00000372459 H7C423 109 aa17.57■□□□□ 0.4
CTSA-203ENST00000372459 LEPROTO15243 131 aa17.57■□□□□ 0.4
CTSA-203ENST00000372459 UBE2D1P51668 147 aa17.57■□□□□ 0.4
CTSA-203ENST00000372459 J3QQQ9 107 aa17.56■□□□□ 0.4
CTSA-203ENST00000372459 LGALS3P17931 250 aaKnown RBP17.56■□□□□ 0.4
CTSA-203ENST00000372459 TSPEAR-AS2P59090 65 aa17.55■□□□□ 0.4
CTSA-203ENST00000372459 DAD1P61803 113 aa17.55■□□□□ 0.4
CTSA-203ENST00000372459 SPANXB1Q9NS25 103 aaPredicted RBP17.55■□□□□ 0.4
CTSA-203ENST00000372459 A0A0J9YY99 117 aa17.55■□□□□ 0.4
CTSA-203ENST00000372459 GYPEP15421 78 aa17.55■□□□□ 0.4
CTSA-203ENST00000372459 TRBV6-8A0A0A6YYG3 113 aa17.54■□□□□ 0.4
CTSA-203ENST00000372459 A8MZ25 164 aa17.54■□□□□ 0.4
CTSA-203ENST00000372459 SRSF9Q13242 221 aaKnown RBP eCLIP17.54■□□□□ 0.4
CTSA-203ENST00000372459 TMEM101Q96IK0 257 aa17.54■□□□□ 0.4
CTSA-203ENST00000372459 GEMIN7Q9H840 131 aaKnown RBP17.54■□□□□ 0.4
CTSA-203ENST00000372459 CDC42SE2Q9NRR3 84 aa17.53■□□□□ 0.4
CTSA-203ENST00000372459 SPART-AS1P0CW21 52 aa17.52■□□□□ 0.4
CTSA-203ENST00000372459 ATP6V0E2Q8NHE4 81 aa17.52■□□□□ 0.4
CTSA-203ENST00000372459 NBEAL2Q6ZNJ1 2754 aa17.52■□□□□ 0.39
CTSA-203ENST00000372459 TIRAPP58753 221 aa17.51■□□□□ 0.39
CTSA-203ENST00000372459 IGHV3-64A0A075B6Q5 118 aa17.51■□□□□ 0.39
CTSA-203ENST00000372459 PGPEP1Q9NXJ5 209 aa17.51■□□□□ 0.39
CTSA-203ENST00000372459 CELA1Q9UNI1 258 aa17.51■□□□□ 0.39
CTSA-203ENST00000372459 PAX4O43316 350 aa17.5■□□□□ 0.39
CTSA-203ENST00000372459 TEX48A0A1B0GUV7 120 aa17.49■□□□□ 0.39
CTSA-203ENST00000372459 RPL24P83731 157 aaKnown RBP17.49■□□□□ 0.39
CTSA-203ENST00000372459 H3BMG7 143 aa17.49■□□□□ 0.39
CTSA-203ENST00000372459 ATP5G1P05496 136 aa17.49■□□□□ 0.39
CTSA-203ENST00000372459 IGHV1-58A0A0C4DH39 117 aa17.48■□□□□ 0.39
CTSA-203ENST00000372459 FAM19A3Q7Z5A8 133 aa17.48■□□□□ 0.39
CTSA-203ENST00000372459 IGLV5-45A0A087WSX0 123 aa17.48■□□□□ 0.39
CTSA-203ENST00000372459 IGHV3-30-3P0DP02 117 aa17.48■□□□□ 0.39
CTSA-203ENST00000372459 HERVK_113P63121 156 aa17.48■□□□□ 0.39
CTSA-203ENST00000372459 GAGE6Q13070 117 aa17.48■□□□□ 0.39
CTSA-203ENST00000372459 CHCHD5Q9BSY4 110 aa17.48■□□□□ 0.39
CTSA-203ENST00000372459 CMYA5Q8N3K9 4069 aa17.47■□□□□ 0.39
CTSA-203ENST00000372459 STAB1Q9NY15 2570 aa17.47■□□□□ 0.39
CTSA-203ENST00000372459 LINC00242Q5T6M2 205 aa17.46■□□□□ 0.39
CTSA-203ENST00000372459 PRO0461Q9UI25 63 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 297.3 ms