RNA–Protein interactions for RNA: ENST00000372235.7

TMEM53-201, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 890 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-201ENST00000372235 KRTAP10-4P60372 401 aaPredicted RBP12.1□□□□□ -0.47
TMEM53-201ENST00000372235 AMN1Q8IY45 258 aa12.1□□□□□ -0.47
TMEM53-201ENST00000372235 C15orf56Q8N910 161 aa12.1□□□□□ -0.47
TMEM53-201ENST00000372235 TMEM242Q9NWH2 141 aa12.1□□□□□ -0.47
TMEM53-201ENST00000372235 GVQW2A0A096LPI5 108 aaPredicted RBP12.09□□□□□ -0.47
TMEM53-201ENST00000372235 LINC00862A6NCI5 91 aa12.09□□□□□ -0.47
TMEM53-201ENST00000372235 S100A8P05109 93 aa12.09□□□□□ -0.47
TMEM53-201ENST00000372235 RPL23P62829 140 aaKnown RBP12.09□□□□□ -0.47
TMEM53-201ENST00000372235 ADIRFQ15847 76 aa12.09□□□□□ -0.47
TMEM53-201ENST00000372235 TMEM18Q96B42 140 aa12.09□□□□□ -0.47
TMEM53-201ENST00000372235 MYCBP2O75592 4640 aa12.08□□□□□ -0.48
TMEM53-201ENST00000372235 HERC1Q15751 4861 aa12.08□□□□□ -0.48
TMEM53-201ENST00000372235 LINC00959A0A1B0GUT2 108 aa12.08□□□□□ -0.48
TMEM53-201ENST00000372235 SUMO2P61956 95 aaKnown RBP12.08□□□□□ -0.48
TMEM53-201ENST00000372235 CSDC2Q9Y534 153 aaKnown RBP12.08□□□□□ -0.48
TMEM53-201ENST00000372235 IGHV1-58A0A0C4DH39 117 aa12.07□□□□□ -0.48
TMEM53-201ENST00000372235 SLPIP03973 132 aa12.07□□□□□ -0.48
TMEM53-201ENST00000372235 FOXI1Q12951 378 aa12.07□□□□□ -0.48
TMEM53-201ENST00000372235 ZNF664Q8N3J9 261 aa12.07□□□□□ -0.48
TMEM53-201ENST00000372235 SPACA4Q8TDM5 124 aa12.07□□□□□ -0.48
TMEM53-201ENST00000372235 CDC42SE2Q9NRR3 84 aa12.07□□□□□ -0.48
TMEM53-201ENST00000372235 LINC00474Q9P2X8 69 aa12.07□□□□□ -0.48
TMEM53-201ENST00000372235 SMIM27A0A1W2PRY6 76 aa12.06□□□□□ -0.48
TMEM53-201ENST00000372235 XCL1P47992 114 aa12.06□□□□□ -0.48
TMEM53-201ENST00000372235 CD164L2Q6UWJ8 174 aa12.06□□□□□ -0.48
TMEM53-201ENST00000372235 C20orf78Q9BR46 151 aa12.06□□□□□ -0.48
TMEM53-201ENST00000372235 C1orf196B1AJZ1 125 aa12.05□□□□□ -0.48
TMEM53-201ENST00000372235 F8W036 122 aa12.05□□□□□ -0.48
TMEM53-201ENST00000372235 GAS8-AS1O95177 125 aa12.05□□□□□ -0.48
TMEM53-201ENST00000372235 HIGD2BQ4VC39 106 aa12.05□□□□□ -0.48
TMEM53-201ENST00000372235 FAM104BQ5XKR9 115 aa12.05□□□□□ -0.48
TMEM53-201ENST00000372235 C7orf33Q8WU49 177 aa12.05□□□□□ -0.48
TMEM53-201ENST00000372235 A0A087WYN8 130 aa12.04□□□□□ -0.48
TMEM53-201ENST00000372235 SERTAD4-AS1Q5TG53 156 aa12.04□□□□□ -0.48
TMEM53-201ENST00000372235 A0A1B0GVG6 124 aa12.03□□□□□ -0.48
TMEM53-201ENST00000372235 PANO1I0J062 215 aa12.03□□□□□ -0.48
TMEM53-201ENST00000372235 ZNF561-AS1K7EIQ3 104 aa12.03□□□□□ -0.48
TMEM53-201ENST00000372235 RPL32P62910 135 aaKnown RBP12.03□□□□□ -0.48
TMEM53-201ENST00000372235 COX6A2Q02221 97 aa12.03□□□□□ -0.48
TMEM53-201ENST00000372235 PLAC8Q9NZF1 115 aa12.03□□□□□ -0.48
TMEM53-201ENST00000372235 TRBV24-1A0A075B6N3 115 aa12.02□□□□□ -0.49
TMEM53-201ENST00000372235 CKS2P33552 79 aa12.02□□□□□ -0.49
TMEM53-201ENST00000372235 CAMPP49913 170 aa12.02□□□□□ -0.49
TMEM53-201ENST00000372235 NRACQ8N912 160 aa12.02□□□□□ -0.49
TMEM53-201ENST00000372235 MRPL51Q4U2R6 128 aaKnown RBP12.01□□□□□ -0.49
TMEM53-201ENST00000372235 Q6ZRU5 148 aa12.01□□□□□ -0.49
TMEM53-201ENST00000372235 TIMM21Q9BVV7 248 aa12.01□□□□□ -0.49
TMEM53-201ENST00000372235 SMKR1H3BMG3 65 aa12□□□□□ -0.49
TMEM53-201ENST00000372235 PPBPP02775 128 aa12□□□□□ -0.49
TMEM53-201ENST00000372235 MALP21145 153 aa12□□□□□ -0.49
TMEM53-201ENST00000372235 HBBP68871 147 aa12□□□□□ -0.49
TMEM53-201ENST00000372235 UBE2D4Q9Y2X8 147 aa12□□□□□ -0.49
TMEM53-201ENST00000372235 C9JQL5 133 aa11.99□□□□□ -0.49
TMEM53-201ENST00000372235 PHOX2AO14813 284 aa11.99□□□□□ -0.49
TMEM53-201ENST00000372235 CHTF8P0CG12 524 aa11.99□□□□□ -0.49
TMEM53-201ENST00000372235 MAJINQ3KP22 176 aa11.99□□□□□ -0.49
TMEM53-201ENST00000372235 CARD19Q96LW7 228 aa11.99□□□□□ -0.49
TMEM53-201ENST00000372235 APOMO95445 188 aa11.98□□□□□ -0.49
TMEM53-201ENST00000372235 PRSS3P2Q8NHM4 247 aa11.98□□□□□ -0.49
TMEM53-201ENST00000372235 COX7A2LO14548 114 aa11.97□□□□□ -0.49
TMEM53-201ENST00000372235 SRSF3P84103 164 aaKnown RBP11.97□□□□□ -0.49
TMEM53-201ENST00000372235 SYCNQ0VAF6 134 aa11.97□□□□□ -0.49
TMEM53-201ENST00000372235 ATP5L2Q7Z4Y8 100 aa11.97□□□□□ -0.49
TMEM53-201ENST00000372235 IGKV2-24A0A0C4DH68 120 aa11.96□□□□□ -0.49
TMEM53-201ENST00000372235 TNFRSF6BO95407 300 aa11.96□□□□□ -0.49
TMEM53-201ENST00000372235 STPG4Q8N801 248 aa11.96□□□□□ -0.49
TMEM53-201ENST00000372235 PNRC1Q12796 327 aaPredicted RBP11.95□□□□□ -0.5
TMEM53-201ENST00000372235 SMIM2Q9BVW6 85 aa11.95□□□□□ -0.5
TMEM53-201ENST00000372235 SPANXA1Q9NS26 97 aa11.95□□□□□ -0.5
TMEM53-201ENST00000372235 RAB14P61106 215 aa11.94□□□□□ -0.5
TMEM53-201ENST00000372235 MRPL54Q6P161 138 aaKnown RBP11.94□□□□□ -0.5
TMEM53-201ENST00000372235 TRAV13-1A0A0B4J241 112 aa11.93□□□□□ -0.5
TMEM53-201ENST00000372235 A0A1B0GXF2 115 aa11.93□□□□□ -0.5
TMEM53-201ENST00000372235 D6R8Y8 96 aa11.93□□□□□ -0.5
TMEM53-201ENST00000372235 ORMDL3Q8N138 153 aa11.93□□□□□ -0.5
TMEM53-201ENST00000372235 IGLV4-69A0A075B6H9 119 aa11.92□□□□□ -0.5
TMEM53-201ENST00000372235 A0A096LNI7 61 aa11.92□□□□□ -0.5
TMEM53-201ENST00000372235 F8WDY8 70 aa11.92□□□□□ -0.5
TMEM53-201ENST00000372235 RAB5AP20339 215 aa11.92□□□□□ -0.5
TMEM53-201ENST00000372235 C2orf48Q96LS8 159 aa11.92□□□□□ -0.5
TMEM53-201ENST00000372235 LOC107984640A0A0U1RRK4 108 aa11.91□□□□□ -0.5
TMEM53-201ENST00000372235 HNRNPA3P51991 378 aaKnown RBP11.91□□□□□ -0.5
TMEM53-201ENST00000372235 MRPS36P82909 103 aaKnown RBP11.91□□□□□ -0.5
TMEM53-201ENST00000372235 ANAPC16Q96DE5 110 aa11.91□□□□□ -0.5
TMEM53-201ENST00000372235 CAMK2N2Q96S95 79 aa11.91□□□□□ -0.5
TMEM53-201ENST00000372235 LAMTOR2Q9Y2Q5 125 aa11.91□□□□□ -0.5
TMEM53-201ENST00000372235 OR10D4PQ8NGN7 298 aa11.9□□□□□ -0.5
TMEM53-201ENST00000372235 MT-ND4LP03901 98 aa11.89□□□□□ -0.51
TMEM53-201ENST00000372235 TMEM136Q6ZRR5 245 aa11.89□□□□□ -0.51
TMEM53-201ENST00000372235 Q6ZUT4 128 aa11.89□□□□□ -0.51
TMEM53-201ENST00000372235 IFI27P40305 119 aaPredicted RBP11.88□□□□□ -0.51
TMEM53-201ENST00000372235 RNASE13Q5GAN3 156 aaKnown RBP11.88□□□□□ -0.51
TMEM53-201ENST00000372235 LINC00526Q96FQ7 95 aa11.88□□□□□ -0.51
TMEM53-201ENST00000372235 NPYP01303 97 aa11.87□□□□□ -0.51
TMEM53-201ENST00000372235 PTTG1IPP53801 180 aa11.87□□□□□ -0.51
TMEM53-201ENST00000372235 RNF151Q2KHN1 245 aa11.87□□□□□ -0.51
TMEM53-201ENST00000372235 PRELID3AQ96N28 172 aa11.87□□□□□ -0.51
TMEM53-201ENST00000372235 PRSS47A8MTI9 375 aa11.86□□□□□ -0.51
TMEM53-201ENST00000372235 RPL39P62891 51 aaKnown RBP11.86□□□□□ -0.51
TMEM53-201ENST00000372235 PRR3P79522 188 aaKnown RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms