RNA–Protein interactions for RNA: ENST00000372146.4

GTF3C4-201, Transcript of general transcription factor IIIC subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C4, Length 9,043 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-201ENST00000372146 IGKV2-28A0A075B6P5 120 aa11.61□□□□□ -0.55
GTF3C4-201ENST00000372146 IGKV2D-28P01615 120 aa11.61□□□□□ -0.55
GTF3C4-201ENST00000372146 A0A1B0GXF2 115 aa11.61□□□□□ -0.55
GTF3C4-201ENST00000372146 C19orf71A6NCJ1 209 aa11.61□□□□□ -0.55
GTF3C4-201ENST00000372146 LST1O00453 97 aa11.61□□□□□ -0.55
GTF3C4-201ENST00000372146 DEFB135Q30KP9 77 aa11.61□□□□□ -0.55
GTF3C4-201ENST00000372146 Q6JHZ5 121 aa11.61□□□□□ -0.55
GTF3C4-201ENST00000372146 IGF1P05019 195 aa11.61□□□□□ -0.55
GTF3C4-201ENST00000372146 AJUBAQ96IF1 538 aa11.61□□□□□ -0.55
GTF3C4-201ENST00000372146 GDF5OSQ5U4N7 250 aa11.6□□□□□ -0.55
GTF3C4-201ENST00000372146 C2orf91Q6ZV80 131 aa11.6□□□□□ -0.55
GTF3C4-201ENST00000372146 NRGNQ92686 78 aa11.6□□□□□ -0.55
GTF3C4-201ENST00000372146 DEFB1P60022 68 aa11.6□□□□□ -0.55
GTF3C4-201ENST00000372146 IBA57-AS1B1ANH7 110 aa11.6□□□□□ -0.55
GTF3C4-201ENST00000372146 UBE2D2P62837 147 aa11.6□□□□□ -0.55
GTF3C4-201ENST00000372146 X6R8D5 127 aa11.6□□□□□ -0.55
GTF3C4-201ENST00000372146 C6orf99Q4VX62 202 aa11.59□□□□□ -0.55
GTF3C4-201ENST00000372146 MYO9AB2RTY4 2548 aa11.59□□□□□ -0.55
GTF3C4-201ENST00000372146 TRBV10-1A0A0K0K1A3 114 aa11.59□□□□□ -0.55
GTF3C4-201ENST00000372146 PRSS33Q8NF86 280 aa11.59□□□□□ -0.55
GTF3C4-201ENST00000372146 CDKN2A-AS1Q9UH64 79 aa11.59□□□□□ -0.55
GTF3C4-201ENST00000372146 IGHV7-81A0A0B4J1V7 117 aa11.59□□□□□ -0.55
GTF3C4-201ENST00000372146 C14orf177Q52M58 125 aa11.59□□□□□ -0.55
GTF3C4-201ENST00000372146 K7ENP7 123 aa11.58□□□□□ -0.56
GTF3C4-201ENST00000372146 CHCHD10Q8WYQ3 142 aaPredicted RBP11.58□□□□□ -0.56
GTF3C4-201ENST00000372146 ESRGQ1W209 222 aa11.57□□□□□ -0.56
GTF3C4-201ENST00000372146 YPEL4Q96NS1 127 aa11.57□□□□□ -0.56
GTF3C4-201ENST00000372146 KLK5Q9Y337 293 aaPredicted RBP11.57□□□□□ -0.56
GTF3C4-201ENST00000372146 SMIM11BQ8TCY0 68 aa11.56□□□□□ -0.56
GTF3C4-201ENST00000372146 PPDPFQ9H3Y8 114 aa11.56□□□□□ -0.56
GTF3C4-201ENST00000372146 THSD7BQ9C0I4 1608 aa11.56□□□□□ -0.56
GTF3C4-201ENST00000372146 SPAG11AQ6PDA7 123 aa11.56□□□□□ -0.56
GTF3C4-201ENST00000372146 LINC00208Q96KT6 92 aa11.55□□□□□ -0.56
GTF3C4-201ENST00000372146 TP53TG3Q9ULZ0 132 aa11.55□□□□□ -0.56
GTF3C4-201ENST00000372146 NRACQ8N912 160 aa11.55□□□□□ -0.56
GTF3C4-201ENST00000372146 COL4A6Q14031 1691 aa11.55□□□□□ -0.56
GTF3C4-201ENST00000372146 IGLV4-3A0A075B6K6 122 aa11.54□□□□□ -0.56
GTF3C4-201ENST00000372146 ZNF22P17026 224 aaPredicted RBP11.54□□□□□ -0.56
GTF3C4-201ENST00000372146 Q6ZQY7 126 aa11.54□□□□□ -0.56
GTF3C4-201ENST00000372146 DHRS4-AS1Q9P1J3 65 aa11.53□□□□□ -0.56
GTF3C4-201ENST00000372146 C5orf56Q8N8D9 126 aa11.53□□□□□ -0.56
GTF3C4-201ENST00000372146 UBE2D4Q9Y2X8 147 aa11.53□□□□□ -0.56
GTF3C4-201ENST00000372146 IGLV9-49A0A0B4J1Y8 123 aa11.53□□□□□ -0.56
GTF3C4-201ENST00000372146 IGLV3-1P01715 115 aa11.52□□□□□ -0.57
GTF3C4-201ENST00000372146 LINC00322Q6ZN03 302 aaPredicted RBP11.52□□□□□ -0.57
GTF3C4-201ENST00000372146 TRBV7-7A0A0K0K1E9 115 aa11.52□□□□□ -0.57
GTF3C4-201ENST00000372146 UBE2D3P61077 147 aa11.52□□□□□ -0.57
GTF3C4-201ENST00000372146 RSPO1Q2MKA7 263 aaPredicted RBP11.52□□□□□ -0.57
GTF3C4-201ENST00000372146 PRORYQ9H606 182 aa11.52□□□□□ -0.57
GTF3C4-201ENST00000372146 Q6ZS92 163 aa11.51□□□□□ -0.57
GTF3C4-201ENST00000372146 A0A087WVE0 104 aa11.51□□□□□ -0.57
GTF3C4-201ENST00000372146 C4orf26Q17RF5 130 aa11.51□□□□□ -0.57
GTF3C4-201ENST00000372146 SHISA2Q6UWI4 295 aa11.51□□□□□ -0.57
GTF3C4-201ENST00000372146 PRO0255Q9UI72 69 aa11.51□□□□□ -0.57
GTF3C4-201ENST00000372146 IGLV1-44P01699 117 aa11.5□□□□□ -0.57
GTF3C4-201ENST00000372146 ZNF80P51504 273 aaPredicted RBP11.49□□□□□ -0.57
GTF3C4-201ENST00000372146 C17orf82Q86X59 251 aaPredicted RBP11.49□□□□□ -0.57
GTF3C4-201ENST00000372146 C4orf3Q8WVX3 66 aa11.49□□□□□ -0.57
GTF3C4-201ENST00000372146 SPRNQ5BIV9 151 aa11.49□□□□□ -0.57
GTF3C4-201ENST00000372146 SPINT4Q6UDR6 99 aa11.48□□□□□ -0.57
GTF3C4-201ENST00000372146 E7EUB6 86 aa11.48□□□□□ -0.57
GTF3C4-201ENST00000372146 IGLV2-14P01704 120 aa11.48□□□□□ -0.57
GTF3C4-201ENST00000372146 SPINK1P00995 79 aa11.48□□□□□ -0.57
GTF3C4-201ENST00000372146 C10orf25Q5T742 122 aa11.48□□□□□ -0.57
GTF3C4-201ENST00000372146 U3KQK5 164 aa11.48□□□□□ -0.57
GTF3C4-201ENST00000372146 CTSZQ9UBR2 303 aa11.48□□□□□ -0.57
GTF3C4-201ENST00000372146 RPL37AP8A6NKH3 93 aa11.47□□□□□ -0.57
GTF3C4-201ENST00000372146 LINC01547P58512 204 aaPredicted RBP11.47□□□□□ -0.57
GTF3C4-201ENST00000372146 PYGO1Q9Y3Y4 419 aa11.47□□□□□ -0.57
GTF3C4-201ENST00000372146 CACNA1AO00555 2505 aa11.47□□□□□ -0.57
GTF3C4-201ENST00000372146 UBE2D1P51668 147 aa11.47□□□□□ -0.57
GTF3C4-201ENST00000372146 CSRP1P21291 193 aaKnown RBP11.47□□□□□ -0.57
GTF3C4-201ENST00000372146 C11orf53Q8IXP5 236 aa11.46□□□□□ -0.57
GTF3C4-201ENST00000372146 LIMD2Q9BT23 127 aa11.46□□□□□ -0.57
GTF3C4-201ENST00000372146 RETNLBQ9BQ08 111 aa11.46□□□□□ -0.58
GTF3C4-201ENST00000372146 PCOTHQ58A44 107 aa11.46□□□□□ -0.58
GTF3C4-201ENST00000372146 A0A0J9YX75 114 aa11.46□□□□□ -0.58
GTF3C4-201ENST00000372146 H0Y9P7 68 aa11.45□□□□□ -0.58
GTF3C4-201ENST00000372146 PLA2G1BP04054 148 aaKnown RBP11.45□□□□□ -0.58
GTF3C4-201ENST00000372146 UNQ9165/PRO28630Q6UXU0 137 aa11.45□□□□□ -0.58
GTF3C4-201ENST00000372146 Q6ZS46 218 aa11.45□□□□□ -0.58
GTF3C4-201ENST00000372146 CXCL6P80162 114 aa11.45□□□□□ -0.58
GTF3C4-201ENST00000372146 Q8N3U1 123 aa11.45□□□□□ -0.58
GTF3C4-201ENST00000372146 PCSK5Q92824 1860 aa11.45□□□□□ -0.58
GTF3C4-201ENST00000372146 ZNF706Q9Y5V0 76 aaPredicted RBP11.45□□□□□ -0.58
GTF3C4-201ENST00000372146 COX17Q14061 63 aa11.45□□□□□ -0.58
GTF3C4-201ENST00000372146 ZNF73O43830 326 aaPredicted RBP11.44□□□□□ -0.58
GTF3C4-201ENST00000372146 IGLV2-8P01709 118 aa11.44□□□□□ -0.58
GTF3C4-201ENST00000372146 LY6LH3BQJ8 138 aa11.44□□□□□ -0.58
GTF3C4-201ENST00000372146 Q6ZTI0 123 aa11.44□□□□□ -0.58
GTF3C4-201ENST00000372146 ZNF524Q96C55 264 aa11.43□□□□□ -0.58
GTF3C4-201ENST00000372146 LOC100131303A0A0U1RQF7 123 aa11.43□□□□□ -0.58
GTF3C4-201ENST00000372146 TLN2Q9Y4G6 2542 aa11.42□□□□□ -0.58
GTF3C4-201ENST00000372146 K7EMT4 169 aa11.42□□□□□ -0.58
GTF3C4-201ENST00000372146 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.42□□□□□ -0.58
GTF3C4-201ENST00000372146 HIVEP2P31629 2446 aa11.42□□□□□ -0.58
GTF3C4-201ENST00000372146 A6NDX4 124 aa11.42□□□□□ -0.58
GTF3C4-201ENST00000372146 SRCAPQ6ZRS2 3230 aa11.42□□□□□ -0.58
GTF3C4-201ENST00000372146 Q8N6K4 173 aa11.42□□□□□ -0.58
GTF3C4-201ENST00000372146 ANKHD1Q8IWZ3 2542 aaKnown RBP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms