RNA–Protein interactions for RNA: ENST00000372097.9

GTF3C5-202, Transcript of general transcription factor IIIC subunit 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GTF3C5, Length 2,406 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C5-202ENST00000372097 LINC00308Q8TCZ7 52 aa13.91□□□□□ -0.18
GTF3C5-202ENST00000372097 CHCHD5Q9BSY4 110 aa13.91□□□□□ -0.18
GTF3C5-202ENST00000372097 IGHV3-38A0A0C4DH36 116 aa13.91□□□□□ -0.18
GTF3C5-202ENST00000372097 MEIG1Q5JSS6 88 aa13.91□□□□□ -0.18
GTF3C5-202ENST00000372097 CIRBPQ14011 172 aaKnown RBP13.9□□□□□ -0.18
GTF3C5-202ENST00000372097 MXRA5Q9NR99 2828 aa13.9□□□□□ -0.18
GTF3C5-202ENST00000372097 PTPN13Q12923 2485 aa13.9□□□□□ -0.18
GTF3C5-202ENST00000372097 NACAE9PAV3 2078 aa13.9□□□□□ -0.19
GTF3C5-202ENST00000372097 DSCR9P59020 149 aa13.89□□□□□ -0.19
GTF3C5-202ENST00000372097 COX6A2Q02221 97 aa13.89□□□□□ -0.19
GTF3C5-202ENST00000372097 ABCA12Q86UK0 2595 aa13.89□□□□□ -0.19
GTF3C5-202ENST00000372097 A8MTW9 85 aa13.89□□□□□ -0.19
GTF3C5-202ENST00000372097 COX7A2LO14548 114 aa13.89□□□□□ -0.19
GTF3C5-202ENST00000372097 ACYP1P07311 99 aa13.89□□□□□ -0.19
GTF3C5-202ENST00000372097 LINC01356Q8N9X3 169 aa13.89□□□□□ -0.19
GTF3C5-202ENST00000372097 FAM110AQ9BQ89 295 aa13.89□□□□□ -0.19
GTF3C5-202ENST00000372097 IGLV5-39A0A0G2JS06 123 aa13.88□□□□□ -0.19
GTF3C5-202ENST00000372097 RBMY1BA6NDE4 496 aaKnown RBP13.88□□□□□ -0.19
GTF3C5-202ENST00000372097 RBMY1EA6NEQ0 496 aaKnown RBP13.88□□□□□ -0.19
GTF3C5-202ENST00000372097 IGHV3-53P01767 116 aa13.88□□□□□ -0.19
GTF3C5-202ENST00000372097 RBMY1DP0C7P1 496 aaKnown RBP13.88□□□□□ -0.19
GTF3C5-202ENST00000372097 HOXD3P31249 432 aaPredicted RBP13.88□□□□□ -0.19
GTF3C5-202ENST00000372097 SMIM20Q8N5G0 67 aa13.88□□□□□ -0.19
GTF3C5-202ENST00000372097 DNAJC30Q96LL9 226 aa13.88□□□□□ -0.19
GTF3C5-202ENST00000372097 Q9H8V8 135 aa13.88□□□□□ -0.19
GTF3C5-202ENST00000372097 DEFB131AP59861 70 aa13.87□□□□□ -0.19
GTF3C5-202ENST00000372097 ZNF415Q09FC8 603 aa13.87□□□□□ -0.19
GTF3C5-202ENST00000372097 SHISA2Q6UWI4 295 aa13.87□□□□□ -0.19
GTF3C5-202ENST00000372097 IGHV3OR16-12A0A075B7B8 117 aa13.86□□□□□ -0.19
GTF3C5-202ENST00000372097 Q8N2B8 174 aa13.86□□□□□ -0.19
GTF3C5-202ENST00000372097 IMUPQ9GZP8 106 aa13.86□□□□□ -0.19
GTF3C5-202ENST00000372097 CREBBPQ92793 2442 aa13.86□□□□□ -0.19
GTF3C5-202ENST00000372097 SOSTDC1Q6X4U4 206 aa13.85□□□□□ -0.19
GTF3C5-202ENST00000372097 BBC3Q96PG8 261 aaPredicted RBP13.85□□□□□ -0.19
GTF3C5-202ENST00000372097 A0A096LNT2 108 aa13.85□□□□□ -0.19
GTF3C5-202ENST00000372097 LINC00242Q5T6M2 205 aa13.85□□□□□ -0.19
GTF3C5-202ENST00000372097 ZNF625Q96I27 306 aaPredicted RBP13.85□□□□□ -0.19
GTF3C5-202ENST00000372097 C11orf72Q8NBR9 251 aa13.84□□□□□ -0.19
GTF3C5-202ENST00000372097 A0A0U1RRA0 63 aa13.84□□□□□ -0.19
GTF3C5-202ENST00000372097 HERVK_113P63121 156 aa13.84□□□□□ -0.19
GTF3C5-202ENST00000372097 DGAT2L7PQ6IED9 249 aa13.84□□□□□ -0.19
GTF3C5-202ENST00000372097 BEAN1Q3B7T3 259 aa13.83□□□□□ -0.19
GTF3C5-202ENST00000372097 SMCR5Q8TEV8 140 aa13.83□□□□□ -0.19
GTF3C5-202ENST00000372097 UBR5O95071 2799 aaPredicted RBP13.83□□□□□ -0.2
GTF3C5-202ENST00000372097 TEX15Q9BXT5 2789 aa13.83□□□□□ -0.2
GTF3C5-202ENST00000372097 NAV2Q8IVL1 2488 aa13.83□□□□□ -0.2
GTF3C5-202ENST00000372097 FAM236AA0A1B0GUQ0 79 aa13.82□□□□□ -0.2
GTF3C5-202ENST00000372097 FAM236BA0A1B0GV22 79 aa13.82□□□□□ -0.2
GTF3C5-202ENST00000372097 HERV-K104P63124 156 aa13.82□□□□□ -0.2
GTF3C5-202ENST00000372097 LINC01587Q99440 93 aa13.82□□□□□ -0.2
GTF3C5-202ENST00000372097 SMIM1B2RUZ4 78 aa13.81□□□□□ -0.2
GTF3C5-202ENST00000372097 UBE2E2Q96LR5 201 aa13.81□□□□□ -0.2
GTF3C5-202ENST00000372097 RS1O15537 224 aa13.81□□□□□ -0.2
GTF3C5-202ENST00000372097 TRACP01848 142 aa13.81□□□□□ -0.2
GTF3C5-202ENST00000372097 DAZ2Q13117 558 aaKnown RBP13.81□□□□□ -0.2
GTF3C5-202ENST00000372097 SDIM1Q6ZPB5 146 aa13.81□□□□□ -0.2
GTF3C5-202ENST00000372097 DAZ4Q86SG3 579 aaKnown RBP13.81□□□□□ -0.2
GTF3C5-202ENST00000372097 COPS9Q8WXC6 57 aa13.81□□□□□ -0.2
GTF3C5-202ENST00000372097 DAZ3Q9NR90 486 aaKnown RBP13.81□□□□□ -0.2
GTF3C5-202ENST00000372097 FAM19A3Q7Z5A8 133 aa13.8□□□□□ -0.2
GTF3C5-202ENST00000372097 LINC00643Q86TS7 51 aa13.8□□□□□ -0.2
GTF3C5-202ENST00000372097 KRTAP10-9P60411 292 aa13.8□□□□□ -0.2
GTF3C5-202ENST00000372097 C22orf24Q9Y442 160 aa13.8□□□□□ -0.2
GTF3C5-202ENST00000372097 NDUFA7O95182 113 aa13.79□□□□□ -0.2
GTF3C5-202ENST00000372097 LINC00694P0DN24 101 aa13.79□□□□□ -0.2
GTF3C5-202ENST00000372097 J3QLI3 93 aa13.78□□□□□ -0.2
GTF3C5-202ENST00000372097 BAALC-AS2P0C853 105 aa13.78□□□□□ -0.2
GTF3C5-202ENST00000372097 TMEM126AQ9H061 195 aa13.78□□□□□ -0.2
GTF3C5-202ENST00000372097 EPG5Q9HCE0 2579 aa13.78□□□□□ -0.2
GTF3C5-202ENST00000372097 C3orf56Q8N813 242 aa13.78□□□□□ -0.2
GTF3C5-202ENST00000372097 PRIMA1Q86XR5 153 aa13.77□□□□□ -0.21
GTF3C5-202ENST00000372097 FAM218AQ96MZ4 157 aa13.77□□□□□ -0.21
GTF3C5-202ENST00000372097 VPREB3Q9UKI3 123 aa13.77□□□□□ -0.21
GTF3C5-202ENST00000372097 SLURP1P55000 103 aa13.76□□□□□ -0.21
GTF3C5-202ENST00000372097 TLN2Q9Y4G6 2542 aa13.76□□□□□ -0.21
GTF3C5-202ENST00000372097 MYO9AB2RTY4 2548 aa13.76□□□□□ -0.21
GTF3C5-202ENST00000372097 CR1P17927 2039 aa13.75□□□□□ -0.21
GTF3C5-202ENST00000372097 TRAV13-1A0A0B4J241 112 aa13.75□□□□□ -0.21
GTF3C5-202ENST00000372097 CSDC2Q9Y534 153 aaKnown RBP13.75□□□□□ -0.21
GTF3C5-202ENST00000372097 F5H768 121 aa13.74□□□□□ -0.21
GTF3C5-202ENST00000372097 IGHV4-31P0DP07 118 aa13.74□□□□□ -0.21
GTF3C5-202ENST00000372097 DEFB136Q30KP8 78 aa13.74□□□□□ -0.21
GTF3C5-202ENST00000372097 PEMTQ9UBM1 199 aa13.74□□□□□ -0.21
GTF3C5-202ENST00000372097 FAM222AQ5U5X8 452 aa13.74□□□□□ -0.21
GTF3C5-202ENST00000372097 Q6YL49 198 aa13.74□□□□□ -0.21
GTF3C5-202ENST00000372097 C18orf65Q6ZTR6 163 aa13.74□□□□□ -0.21
GTF3C5-202ENST00000372097 ZNF843Q8N446 348 aa13.74□□□□□ -0.21
GTF3C5-202ENST00000372097 ZNF469Q96JG9 3925 aaPredicted RBP13.74□□□□□ -0.21
GTF3C5-202ENST00000372097 ZNF702PQ9H963 129 aa13.73□□□□□ -0.21
GTF3C5-202ENST00000372097 MAP6D1Q9H9H5 199 aa13.73□□□□□ -0.21
GTF3C5-202ENST00000372097 PPDPFQ9H3Y8 114 aa13.73□□□□□ -0.21
GTF3C5-202ENST00000372097 NTM-AS1Q6ZSK4 140 aa13.72□□□□□ -0.21
GTF3C5-202ENST00000372097 INSP01308 110 aa13.72□□□□□ -0.21
GTF3C5-202ENST00000372097 HIST2H2BCQ6DN03 193 aa13.71□□□□□ -0.21
GTF3C5-202ENST00000372097 HIST2H2BDQ6DRA6 164 aa13.71□□□□□ -0.21
GTF3C5-202ENST00000372097 FSHBP01225 129 aa13.71□□□□□ -0.22
GTF3C5-202ENST00000372097 C5orf38Q86SI9 138 aa13.71□□□□□ -0.22
GTF3C5-202ENST00000372097 C3orf22Q8N5N4 141 aa13.71□□□□□ -0.22
GTF3C5-202ENST00000372097 CDC42SE2Q9NRR3 84 aa13.71□□□□□ -0.22
GTF3C5-202ENST00000372097 APCP25054 2843 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms