RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 FSTL3O95633 263 aa16.41■□□□□ 0.22
TM9SF3-201ENST00000371142 LY6G6DO95868 133 aa16.41■□□□□ 0.22
TM9SF3-201ENST00000371142 SYCNQ0VAF6 134 aa16.41■□□□□ 0.22
TM9SF3-201ENST00000371142 ZNF702PQ9H963 129 aa16.41■□□□□ 0.22
TM9SF3-201ENST00000371142 KIR2DL5BQ8NHK3 375 aa16.41■□□□□ 0.22
TM9SF3-201ENST00000371142 C1orf158Q8N1D5 194 aa16.41■□□□□ 0.22
TM9SF3-201ENST00000371142 ZNF843Q8N446 348 aa16.41■□□□□ 0.22
TM9SF3-201ENST00000371142 LOC100131303A0A0U1RQF7 123 aa16.4■□□□□ 0.22
TM9SF3-201ENST00000371142 U3KQK5 164 aa16.4■□□□□ 0.22
TM9SF3-201ENST00000371142 SPTSSBQ8NFR3 76 aa16.4■□□□□ 0.22
TM9SF3-201ENST00000371142 NDUFV3P56181 108 aaKnown RBP16.39■□□□□ 0.22
TM9SF3-201ENST00000371142 SHISA2Q6UWI4 295 aa16.39■□□□□ 0.22
TM9SF3-201ENST00000371142 PRM2P04554 102 aa16.39■□□□□ 0.21
TM9SF3-201ENST00000371142 C3orf84H3BNL1 204 aa16.38■□□□□ 0.21
TM9SF3-201ENST00000371142 PPDPFQ9H3Y8 114 aa16.38■□□□□ 0.21
TM9SF3-201ENST00000371142 M0R2N4 97 aa16.38■□□□□ 0.21
TM9SF3-201ENST00000371142 IGLV2-11P01706 119 aa16.37■□□□□ 0.21
TM9SF3-201ENST00000371142 HIVEP2P31629 2446 aa16.37■□□□□ 0.21
TM9SF3-201ENST00000371142 ALPK3Q96L96 1907 aa16.37■□□□□ 0.21
TM9SF3-201ENST00000371142 RBX1P62877 108 aa16.37■□□□□ 0.21
TM9SF3-201ENST00000371142 PRR9Q5T870 116 aa16.37■□□□□ 0.21
TM9SF3-201ENST00000371142 TSHBP01222 138 aa16.36■□□□□ 0.21
TM9SF3-201ENST00000371142 PSMG3-AS1Q96PY0 264 aa16.36■□□□□ 0.21
TM9SF3-201ENST00000371142 A0A0J9YWU9 116 aa16.36■□□□□ 0.21
TM9SF3-201ENST00000371142 CCKP06307 115 aa16.36■□□□□ 0.21
TM9SF3-201ENST00000371142 NUP210LQ5VU65 1888 aa16.36■□□□□ 0.21
TM9SF3-201ENST00000371142 LTBP2Q14767 1821 aa16.36■□□□□ 0.21
TM9SF3-201ENST00000371142 TRAV10A0A0B4J240 114 aa16.35■□□□□ 0.21
TM9SF3-201ENST00000371142 RNASE3P12724 160 aaKnown RBP16.35■□□□□ 0.21
TM9SF3-201ENST00000371142 Q6ZS46 218 aa16.35■□□□□ 0.21
TM9SF3-201ENST00000371142 HRCT1Q6UXD1 115 aa16.35■□□□□ 0.21
TM9SF3-201ENST00000371142 TRBV30A0A0K0K1B3 111 aa16.34■□□□□ 0.21
TM9SF3-201ENST00000371142 TRBV27A0A0K0K1C4 114 aa16.34■□□□□ 0.21
TM9SF3-201ENST00000371142 KIAA1549Q9HCM3 1950 aa16.33■□□□□ 0.2
TM9SF3-201ENST00000371142 CLUHP3Q96NS8 147 aa16.33■□□□□ 0.2
TM9SF3-201ENST00000371142 LINC01006Q8NI28 216 aa16.32■□□□□ 0.2
TM9SF3-201ENST00000371142 KPRPQ5T749 579 aaPredicted RBP16.32■□□□□ 0.2
TM9SF3-201ENST00000371142 C3orf22Q8N5N4 141 aa16.32■□□□□ 0.2
TM9SF3-201ENST00000371142 TRBV6-5A0A0K0K1A5 114 aa16.32■□□□□ 0.2
TM9SF3-201ENST00000371142 FAM236DA0A1B0GTK5 79 aa16.32■□□□□ 0.2
TM9SF3-201ENST00000371142 FAM236CP0DP71 79 aa16.32■□□□□ 0.2
TM9SF3-201ENST00000371142 SPINK6Q6UWN8 80 aa16.32■□□□□ 0.2
TM9SF3-201ENST00000371142 NRACQ8N912 160 aa16.32■□□□□ 0.2
TM9SF3-201ENST00000371142 C11orf21Q9P2W6 132 aa16.31■□□□□ 0.2
TM9SF3-201ENST00000371142 C7orf33Q8WU49 177 aa16.31■□□□□ 0.2
TM9SF3-201ENST00000371142 PYGO1Q9Y3Y4 419 aa16.31■□□□□ 0.2
TM9SF3-201ENST00000371142 CD164L2Q6UWJ8 174 aa16.3■□□□□ 0.2
TM9SF3-201ENST00000371142 UQCRQO14949 82 aa16.3■□□□□ 0.2
TM9SF3-201ENST00000371142 MRPS12O15235 138 aaKnown RBP16.3■□□□□ 0.2
TM9SF3-201ENST00000371142 PCDH15Q96QU1 1955 aa16.3■□□□□ 0.2
TM9SF3-201ENST00000371142 ATP5EP2Q5VTU8 51 aa16.3■□□□□ 0.2
TM9SF3-201ENST00000371142 Q8N6K4 173 aa16.3■□□□□ 0.2
TM9SF3-201ENST00000371142 UBE2D4Q9Y2X8 147 aa16.29■□□□□ 0.2
TM9SF3-201ENST00000371142 MED12LQ86YW9 2145 aa16.29■□□□□ 0.2
TM9SF3-201ENST00000371142 RPL37AP8A6NKH3 93 aa16.29■□□□□ 0.2
TM9SF3-201ENST00000371142 TANC2Q9HCD6 1990 aa16.29■□□□□ 0.2
TM9SF3-201ENST00000371142 LINC00959A0A1B0GUT2 108 aa16.28■□□□□ 0.2
TM9SF3-201ENST00000371142 Q6ZQY7 126 aa16.27■□□□□ 0.2
TM9SF3-201ENST00000371142 BDP1A6H8Y1 2624 aa16.27■□□□□ 0.19
TM9SF3-201ENST00000371142 GAS8-AS1O95177 125 aa16.26■□□□□ 0.19
TM9SF3-201ENST00000371142 DSCAMO60469 2012 aa16.26■□□□□ 0.19
TM9SF3-201ENST00000371142 C9orf85Q96MD7 179 aa16.25■□□□□ 0.19
TM9SF3-201ENST00000371142 M0R378 163 aa16.25■□□□□ 0.19
TM9SF3-201ENST00000371142 LELP1Q5T871 98 aa16.25■□□□□ 0.19
TM9SF3-201ENST00000371142 WFDC13Q8IUB5 93 aa16.25■□□□□ 0.19
TM9SF3-201ENST00000371142 WNK1Q9H4A3 2382 aa16.24■□□□□ 0.19
TM9SF3-201ENST00000371142 UBE2D1P51668 147 aa16.24■□□□□ 0.19
TM9SF3-201ENST00000371142 PCNX3Q9H6A9 2034 aa16.24■□□□□ 0.19
TM9SF3-201ENST00000371142 YPEL4Q96NS1 127 aa16.24■□□□□ 0.19
TM9SF3-201ENST00000371142 PRR14LQ5THK1 2151 aa16.24■□□□□ 0.19
TM9SF3-201ENST00000371142 KLLNB2CW77 178 aa16.24■□□□□ 0.19
TM9SF3-201ENST00000371142 IGLV4-69A0A075B6H9 119 aa16.23■□□□□ 0.19
TM9SF3-201ENST00000371142 SMIM11BQ8TCY0 68 aa16.23■□□□□ 0.19
TM9SF3-201ENST00000371142 TIMM17BO60830 172 aa16.22■□□□□ 0.19
TM9SF3-201ENST00000371142 IGLV1-40P01703 118 aa16.22■□□□□ 0.19
TM9SF3-201ENST00000371142 NANOS2P60321 138 aaKnown RBP16.22■□□□□ 0.19
TM9SF3-201ENST00000371142 SNURFQ9Y675 71 aa16.21■□□□□ 0.19
TM9SF3-201ENST00000371142 SPG11Q96JI7 2443 aa16.21■□□□□ 0.19
TM9SF3-201ENST00000371142 COL4A4P53420 1690 aaPredicted RBP16.21■□□□□ 0.19
TM9SF3-201ENST00000371142 IGLV9-49A0A0B4J1Y8 123 aa16.21■□□□□ 0.19
TM9SF3-201ENST00000371142 OTOGLQ3ZCN5 2332 aa16.21■□□□□ 0.19
TM9SF3-201ENST00000371142 DHRS4-AS1Q9P1J3 65 aa16.21■□□□□ 0.19
TM9SF3-201ENST00000371142 LY6G6CO95867 125 aa16.21■□□□□ 0.18
TM9SF3-201ENST00000371142 EDN2P20800 178 aa16.2■□□□□ 0.18
TM9SF3-201ENST00000371142 C2orf91Q6ZV80 131 aa16.19■□□□□ 0.18
TM9SF3-201ENST00000371142 LOC107984640A0A0U1RRK4 108 aa16.19■□□□□ 0.18
TM9SF3-201ENST00000371142 CDSNQ15517 529 aa16.18■□□□□ 0.18
TM9SF3-201ENST00000371142 POLR2KP53803 58 aaKnown RBP16.17■□□□□ 0.18
TM9SF3-201ENST00000371142 ANKHD1Q8IWZ3 2542 aaKnown RBP16.17■□□□□ 0.18
TM9SF3-201ENST00000371142 NDUFC2-KCTD14E9PQ53 114 aa16.17■□□□□ 0.18
TM9SF3-201ENST00000371142 ZNF706Q9Y5V0 76 aaPredicted RBP16.17■□□□□ 0.18
TM9SF3-201ENST00000371142 MRPS36P82909 103 aaKnown RBP16.17■□□□□ 0.18
TM9SF3-201ENST00000371142 OXLD1Q5BKU9 147 aa16.16■□□□□ 0.18
TM9SF3-201ENST00000371142 PLAC8L1A1L4L8 177 aa16.15■□□□□ 0.18
TM9SF3-201ENST00000371142 LST1O00453 97 aa16.15■□□□□ 0.18
TM9SF3-201ENST00000371142 PRR4Q16378 134 aa16.15■□□□□ 0.18
TM9SF3-201ENST00000371142 CSPG4Q6UVK1 2322 aa16.15■□□□□ 0.18
TM9SF3-201ENST00000371142 POM121L12Q8N7R1 296 aa16.15■□□□□ 0.18
TM9SF3-201ENST00000371142 PRO3102Q9H379 93 aa16.15■□□□□ 0.18
TM9SF3-201ENST00000371142 A0A0U1RQV1 116 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms