RNA–Protein interactions for RNA: ENST00000370397.7

CHUK-201, Transcript of conserved helix-loop-helix ubiquitous kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHUK, Length 3,625 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHUK-201ENST00000370397 LINC00242Q5T6M2 205 aa12.6□□□□□ -0.39
CHUK-201ENST00000370397 MSMBP08118 114 aa12.6□□□□□ -0.39
CHUK-201ENST00000370397 COX7A2LO14548 114 aa12.6□□□□□ -0.39
CHUK-201ENST00000370397 ZNF625Q96I27 306 aaPredicted RBP12.6□□□□□ -0.39
CHUK-201ENST00000370397 BBC3Q96PG8 261 aaPredicted RBP12.6□□□□□ -0.39
CHUK-201ENST00000370397 DUX5Q96PT3 197 aa12.59□□□□□ -0.39
CHUK-201ENST00000370397 IGHV3-38A0A0C4DH36 116 aa12.58□□□□□ -0.39
CHUK-201ENST00000370397 HOXD3P31249 432 aaPredicted RBP12.58□□□□□ -0.4
CHUK-201ENST00000370397 SMIM1B2RUZ4 78 aa12.58□□□□□ -0.4
CHUK-201ENST00000370397 FAM218AQ96MZ4 157 aa12.58□□□□□ -0.4
CHUK-201ENST00000370397 F5H768 121 aa12.57□□□□□ -0.4
CHUK-201ENST00000370397 IMUPQ9GZP8 106 aa12.57□□□□□ -0.4
CHUK-201ENST00000370397 MEIG1Q5JSS6 88 aa12.57□□□□□ -0.4
CHUK-201ENST00000370397 DNAJC30Q96LL9 226 aa12.57□□□□□ -0.4
CHUK-201ENST00000370397 FBN2P35556 2912 aa12.57□□□□□ -0.4
CHUK-201ENST00000370397 LINC00694P0DN24 101 aa12.56□□□□□ -0.4
CHUK-201ENST00000370397 PPDPFQ9H3Y8 114 aa12.56□□□□□ -0.4
CHUK-201ENST00000370397 Q9H8V8 135 aa12.56□□□□□ -0.4
CHUK-201ENST00000370397 NDUFA7O95182 113 aa12.56□□□□□ -0.4
CHUK-201ENST00000370397 RS1O15537 224 aa12.55□□□□□ -0.4
CHUK-201ENST00000370397 HTN1P15515 57 aa12.55□□□□□ -0.4
CHUK-201ENST00000370397 GNLYP22749 145 aa12.55□□□□□ -0.4
CHUK-201ENST00000370397 DEFB112Q30KQ8 113 aa12.55□□□□□ -0.4
CHUK-201ENST00000370397 SMIM20Q8N5G0 67 aa12.55□□□□□ -0.4
CHUK-201ENST00000370397 ACYP1P07311 99 aa12.55□□□□□ -0.4
CHUK-201ENST00000370397 IL17DQ8TAD2 202 aa12.55□□□□□ -0.4
CHUK-201ENST00000370397 KMT2BQ9UMN6 2715 aaPredicted RBP12.54□□□□□ -0.4
CHUK-201ENST00000370397 ZNF843Q8N446 348 aa12.54□□□□□ -0.4
CHUK-201ENST00000370397 CFAP46Q8IYW2 2715 aa12.54□□□□□ -0.4
CHUK-201ENST00000370397 DEFB131AP59861 70 aa12.53□□□□□ -0.4
CHUK-201ENST00000370397 TRACP01848 142 aa12.53□□□□□ -0.4
CHUK-201ENST00000370397 ZNF415Q09FC8 603 aa12.53□□□□□ -0.4
CHUK-201ENST00000370397 C18orf65Q6ZTR6 163 aa12.53□□□□□ -0.4
CHUK-201ENST00000370397 CSPG4Q6UVK1 2322 aa12.53□□□□□ -0.4
CHUK-201ENST00000370397 HERV-K104P63124 156 aa12.52□□□□□ -0.4
CHUK-201ENST00000370397 DAZ2Q13117 558 aaKnown RBP12.52□□□□□ -0.4
CHUK-201ENST00000370397 NTM-AS1Q6ZSK4 140 aa12.52□□□□□ -0.4
CHUK-201ENST00000370397 DAZ4Q86SG3 579 aaKnown RBP12.52□□□□□ -0.4
CHUK-201ENST00000370397 DAZ3Q9NR90 486 aaKnown RBP12.52□□□□□ -0.4
CHUK-201ENST00000370397 C5orf38Q86SI9 138 aa12.52□□□□□ -0.41
CHUK-201ENST00000370397 UBE2E2Q96LR5 201 aa12.52□□□□□ -0.41
CHUK-201ENST00000370397 ZNF702PQ9H963 129 aa12.52□□□□□ -0.41
CHUK-201ENST00000370397 FAM236AA0A1B0GUQ0 79 aa12.51□□□□□ -0.41
CHUK-201ENST00000370397 FAM236BA0A1B0GV22 79 aa12.51□□□□□ -0.41
CHUK-201ENST00000370397 Q96MF0 132 aa12.51□□□□□ -0.41
CHUK-201ENST00000370397 CSDC2Q9Y534 153 aaKnown RBP12.51□□□□□ -0.41
CHUK-201ENST00000370397 FLNCQ14315 2725 aa12.51□□□□□ -0.41
CHUK-201ENST00000370397 HERVK_113P63121 156 aa12.51□□□□□ -0.41
CHUK-201ENST00000370397 CCL19Q99731 98 aa12.51□□□□□ -0.41
CHUK-201ENST00000370397 A0A096LNT2 108 aa12.5□□□□□ -0.41
CHUK-201ENST00000370397 PRB1P04280 392 aa12.5□□□□□ -0.41
CHUK-201ENST00000370397 FAM222AQ5U5X8 452 aa12.5□□□□□ -0.41
CHUK-201ENST00000370397 HIST1H4AP62805 103 aaKnown RBP12.49□□□□□ -0.41
CHUK-201ENST00000370397 LINC00643Q86TS7 51 aa12.49□□□□□ -0.41
CHUK-201ENST00000370397 SLURP1P55000 103 aa12.49□□□□□ -0.41
CHUK-201ENST00000370397 MAP6D1Q9H9H5 199 aa12.48□□□□□ -0.41
CHUK-201ENST00000370397 CIRBPQ14011 172 aaKnown RBP12.48□□□□□ -0.41
CHUK-201ENST00000370397 C3orf56Q8N813 242 aa12.48□□□□□ -0.41
CHUK-201ENST00000370397 PEMTQ9UBM1 199 aa12.48□□□□□ -0.41
CHUK-201ENST00000370397 B4DSR2 109 aa12.47□□□□□ -0.41
CHUK-201ENST00000370397 DEFB136Q30KP8 78 aa12.47□□□□□ -0.41
CHUK-201ENST00000370397 IGKV2-28A0A075B6P5 120 aa12.47□□□□□ -0.41
CHUK-201ENST00000370397 IGKV2D-28P01615 120 aa12.47□□□□□ -0.41
CHUK-201ENST00000370397 C9orf129Q5T035 196 aaKnown RBP12.47□□□□□ -0.41
CHUK-201ENST00000370397 A0A0U1RRA0 63 aa12.46□□□□□ -0.41
CHUK-201ENST00000370397 C2orf48Q96LS8 159 aa12.46□□□□□ -0.41
CHUK-201ENST00000370397 TMEM126AQ9H061 195 aa12.46□□□□□ -0.41
CHUK-201ENST00000370397 CDC42SE2Q9NRR3 84 aa12.46□□□□□ -0.41
CHUK-201ENST00000370397 ATP5J2P56134 94 aa12.45□□□□□ -0.42
CHUK-201ENST00000370397 FSHBP01225 129 aa12.45□□□□□ -0.42
CHUK-201ENST00000370397 BAALC-AS2P0C853 105 aa12.45□□□□□ -0.42
CHUK-201ENST00000370397 RPL28P46779 137 aaKnown RBP12.45□□□□□ -0.42
CHUK-201ENST00000370397 NIPBLQ6KC79 2804 aaeCLIP12.45□□□□□ -0.42
CHUK-201ENST00000370397 LINC00337Q8N6G1 96 aa12.44□□□□□ -0.42
CHUK-201ENST00000370397 CXCL5P42830 114 aa12.44□□□□□ -0.42
CHUK-201ENST00000370397 OBSCN-AS1Q96MR7 158 aa12.44□□□□□ -0.42
CHUK-201ENST00000370397 C3orf22Q8N5N4 141 aa12.43□□□□□ -0.42
CHUK-201ENST00000370397 EPG5Q9HCE0 2579 aa12.43□□□□□ -0.42
CHUK-201ENST00000370397 VPREB3Q9UKI3 123 aa12.43□□□□□ -0.42
CHUK-201ENST00000370397 C1orf158Q8N1D5 194 aa12.42□□□□□ -0.42
CHUK-201ENST00000370397 HIST2H2BCQ6DN03 193 aa12.42□□□□□ -0.42
CHUK-201ENST00000370397 HIST2H2BDQ6DRA6 164 aa12.42□□□□□ -0.42
CHUK-201ENST00000370397 PRIMA1Q86XR5 153 aa12.42□□□□□ -0.42
CHUK-201ENST00000370397 CR1P17927 2039 aa12.41□□□□□ -0.42
CHUK-201ENST00000370397 LINC00526Q96FQ7 95 aa12.41□□□□□ -0.42
CHUK-201ENST00000370397 CHD6Q8TD26 2715 aa12.41□□□□□ -0.42
CHUK-201ENST00000370397 SPG11Q96JI7 2443 aa12.4□□□□□ -0.42
CHUK-201ENST00000370397 Q6YL49 198 aa12.4□□□□□ -0.42
CHUK-201ENST00000370397 Q9HAA7 133 aa12.4□□□□□ -0.42
CHUK-201ENST00000370397 TRAV13-1A0A0B4J241 112 aa12.39□□□□□ -0.43
CHUK-201ENST00000370397 COPS9Q8WXC6 57 aa12.39□□□□□ -0.43
CHUK-201ENST00000370397 INSP01308 110 aa12.39□□□□□ -0.43
CHUK-201ENST00000370397 UBR5O95071 2799 aaPredicted RBP12.39□□□□□ -0.43
CHUK-201ENST00000370397 UQCRQO14949 82 aa12.39□□□□□ -0.43
CHUK-201ENST00000370397 SETXQ7Z333 2677 aaKnown RBP12.39□□□□□ -0.43
CHUK-201ENST00000370397 A0A087WYN8 130 aa12.38□□□□□ -0.43
CHUK-201ENST00000370397 ATP5G1P05496 136 aa12.38□□□□□ -0.43
CHUK-201ENST00000370397 MALP21145 153 aa12.38□□□□□ -0.43
CHUK-201ENST00000370397 PF4P02776 101 aa12.38□□□□□ -0.43
CHUK-201ENST00000370397 DGAT2L7PQ6IED9 249 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms