RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 RBMY1FQ15415 496 aaKnown RBP7.81□□□□□ -1.16
TPM3-212ENST00000368533 MDFICQ9P1T7 246 aa7.81□□□□□ -1.16
TPM3-212ENST00000368533 SUMO4Q6EEV6 95 aa7.8□□□□□ -1.16
TPM3-212ENST00000368533 ODF3L2Q3SX64 289 aa7.8□□□□□ -1.16
TPM3-212ENST00000368533 NEXN-AS1Q8NBZ9 246 aa7.8□□□□□ -1.16
TPM3-212ENST00000368533 KLK5Q9Y337 293 aaPredicted RBP7.8□□□□□ -1.16
TPM3-212ENST00000368533 TRAV12-1A0A0B4J245 112 aa7.79□□□□□ -1.16
TPM3-212ENST00000368533 SDHAF1A6NFY7 115 aa7.79□□□□□ -1.16
TPM3-212ENST00000368533 LINC00694P0DN24 101 aa7.79□□□□□ -1.16
TPM3-212ENST00000368533 RPL35AP18077 110 aaKnown RBP7.79□□□□□ -1.16
TPM3-212ENST00000368533 TMEM170BQ5T4T1 132 aa7.79□□□□□ -1.16
TPM3-212ENST00000368533 VCX2Q9H322 139 aa7.79□□□□□ -1.16
TPM3-212ENST00000368533 FAM19A4Q96LR4 140 aa7.79□□□□□ -1.16
TPM3-212ENST00000368533 NOTCH1P46531 2555 aa7.79□□□□□ -1.16
TPM3-212ENST00000368533 KLLNB2CW77 178 aa7.78□□□□□ -1.16
TPM3-212ENST00000368533 VCYO14598 125 aa7.78□□□□□ -1.16
TPM3-212ENST00000368533 NDUFA7O95182 113 aa7.78□□□□□ -1.16
TPM3-212ENST00000368533 MED14OSP0DP75 135 aa7.78□□□□□ -1.16
TPM3-212ENST00000368533 SBSPONQ8IVN8 264 aa7.78□□□□□ -1.16
TPM3-212ENST00000368533 IGHV3-73A0A0B4J1V6 119 aa7.78□□□□□ -1.16
TPM3-212ENST00000368533 TRAV8-4A0A0B4J246 113 aa7.78□□□□□ -1.16
TPM3-212ENST00000368533 H3BMM0 161 aa7.78□□□□□ -1.16
TPM3-212ENST00000368533 C10orf126Q8N4M7 172 aa7.78□□□□□ -1.16
TPM3-212ENST00000368533 EIF4EBP3O60516 100 aaPredicted RBP7.77□□□□□ -1.17
TPM3-212ENST00000368533 TSPEAR-AS2P59090 65 aa7.77□□□□□ -1.17
TPM3-212ENST00000368533 Q1RN00 199 aa7.77□□□□□ -1.17
TPM3-212ENST00000368533 IGHV3-64A0A075B6Q5 118 aa7.77□□□□□ -1.17
TPM3-212ENST00000368533 A0A0J9YY99 117 aa7.77□□□□□ -1.17
TPM3-212ENST00000368533 ZNF876PQ49A33 203 aa7.77□□□□□ -1.17
TPM3-212ENST00000368533 TRAV2A0A0B4J234 112 aa7.76□□□□□ -1.17
TPM3-212ENST00000368533 PRO1854Q9UHT4 67 aa7.76□□□□□ -1.17
TPM3-212ENST00000368533 CSDC2Q9Y534 153 aaKnown RBP7.76□□□□□ -1.17
TPM3-212ENST00000368533 C11orf86A6NJI1 115 aa7.76□□□□□ -1.17
TPM3-212ENST00000368533 LINC00315P59091 139 aa7.76□□□□□ -1.17
TPM3-212ENST00000368533 HERVK_113P61574 105 aa7.76□□□□□ -1.17
TPM3-212ENST00000368533 CEMP1Q6PRD7 247 aaPredicted RBP7.76□□□□□ -1.17
TPM3-212ENST00000368533 STHQ8IWL8 128 aa7.76□□□□□ -1.17
TPM3-212ENST00000368533 OPRPNQ99935 248 aaPredicted RBP7.76□□□□□ -1.17
TPM3-212ENST00000368533 KIF25-AS1Q9Y6Z4 181 aa7.76□□□□□ -1.17
TPM3-212ENST00000368533 IGHV1OR15-1A0A075B7D0 117 aa7.76□□□□□ -1.17
TPM3-212ENST00000368533 A4D1N5 150 aa7.76□□□□□ -1.17
TPM3-212ENST00000368533 LYRM7Q5U5X0 104 aa7.76□□□□□ -1.17
TPM3-212ENST00000368533 LINC01587Q99440 93 aa7.76□□□□□ -1.17
TPM3-212ENST00000368533 IGHV3-16A0A0C4DH30 117 aa7.75□□□□□ -1.17
TPM3-212ENST00000368533 IGHV3-30P01768 117 aa7.75□□□□□ -1.17
TPM3-212ENST00000368533 IGHV3-30-5P0DP03 117 aa7.75□□□□□ -1.17
TPM3-212ENST00000368533 PMVKQ15126 192 aa7.75□□□□□ -1.17
TPM3-212ENST00000368533 ZNF22P17026 224 aaPredicted RBP7.74□□□□□ -1.17
TPM3-212ENST00000368533 POLR2KP53803 58 aaKnown RBP7.74□□□□□ -1.17
TPM3-212ENST00000368533 LINC00482Q8N8I6 264 aa7.74□□□□□ -1.17
TPM3-212ENST00000368533 FAM236AA0A1B0GUQ0 79 aa7.73□□□□□ -1.17
TPM3-212ENST00000368533 FAM236BA0A1B0GV22 79 aa7.73□□□□□ -1.17
TPM3-212ENST00000368533 TSHBP01222 138 aa7.73□□□□□ -1.17
TPM3-212ENST00000368533 CRYGDP07320 174 aa7.73□□□□□ -1.17
TPM3-212ENST00000368533 TRGV11A0A075B6L2 103 aa7.73□□□□□ -1.17
TPM3-212ENST00000368533 NXPH4O95158 308 aa7.73□□□□□ -1.17
TPM3-212ENST00000368533 KRTAP24-1Q3LI83 254 aa7.73□□□□□ -1.17
TPM3-212ENST00000368533 LINC01620Q4KN68 170 aa7.73□□□□□ -1.17
TPM3-212ENST00000368533 IGIPA6NJ69 53 aa7.72□□□□□ -1.17
TPM3-212ENST00000368533 IGLV1-51P01701 117 aa7.72□□□□□ -1.17
TPM3-212ENST00000368533 IGHV3-33P01772 117 aa7.72□□□□□ -1.17
TPM3-212ENST00000368533 PAPPA-AS1Q5QFB9 102 aa7.72□□□□□ -1.17
TPM3-212ENST00000368533 M0QY20 66 aa7.72□□□□□ -1.17
TPM3-212ENST00000368533 NPC2P61916 151 aa7.72□□□□□ -1.17
TPM3-212ENST00000368533 P0DMU3 169 aa7.71□□□□□ -1.18
TPM3-212ENST00000368533 FAM231AP0DMU4 169 aa7.71□□□□□ -1.18
TPM3-212ENST00000368533 FAM231CP0DMU5 169 aa7.71□□□□□ -1.18
TPM3-212ENST00000368533 LGALS3P17931 250 aaKnown RBP7.71□□□□□ -1.18
TPM3-212ENST00000368533 UBE2WQ96B02 151 aa7.71□□□□□ -1.18
TPM3-212ENST00000368533 TMEM141Q96I45 108 aa7.71□□□□□ -1.18
TPM3-212ENST00000368533 C9orf85Q96MD7 179 aa7.71□□□□□ -1.18
TPM3-212ENST00000368533 IGLV4-69A0A075B6H9 119 aa7.71□□□□□ -1.18
TPM3-212ENST00000368533 C2orf82Q6UX34 121 aa7.71□□□□□ -1.18
TPM3-212ENST00000368533 EDA2RQ9HAV5 297 aa7.71□□□□□ -1.18
TPM3-212ENST00000368533 TRBV27A0A0K0K1C4 114 aa7.7□□□□□ -1.18
TPM3-212ENST00000368533 C9orf153Q5TBE3 101 aa7.7□□□□□ -1.18
TPM3-212ENST00000368533 MUSTN1Q8IVN3 82 aa7.7□□□□□ -1.18
TPM3-212ENST00000368533 Q6Q795 121 aa7.7□□□□□ -1.18
TPM3-212ENST00000368533 ZNRF2Q8NHG8 242 aa7.7□□□□□ -1.18
TPM3-212ENST00000368533 CLEC2BQ92478 149 aa7.7□□□□□ -1.18
TPM3-212ENST00000368533 RNASE13Q5GAN3 156 aaKnown RBP7.69□□□□□ -1.18
TPM3-212ENST00000368533 FAM19A5Q7Z5A7 132 aaPredicted RBP7.69□□□□□ -1.18
TPM3-212ENST00000368533 PRIMA1Q86XR5 153 aa7.69□□□□□ -1.18
TPM3-212ENST00000368533 SLC25A29Q8N8R3 303 aa7.69□□□□□ -1.18
TPM3-212ENST00000368533 TIMM17AQ99595 171 aa7.69□□□□□ -1.18
TPM3-212ENST00000368533 IGHV3-53P01767 116 aa7.69□□□□□ -1.18
TPM3-212ENST00000368533 POM121L12Q8N7R1 296 aa7.69□□□□□ -1.18
TPM3-212ENST00000368533 Q9UF83 564 aa7.69□□□□□ -1.18
TPM3-212ENST00000368533 I3L3M4 83 aa7.69□□□□□ -1.18
TPM3-212ENST00000368533 J3QQQ9 107 aa7.69□□□□□ -1.18
TPM3-212ENST00000368533 TRIAP1O43715 76 aa7.69□□□□□ -1.18
TPM3-212ENST00000368533 A0A0J9YXV3 536 aa7.68□□□□□ -1.18
TPM3-212ENST00000368533 HERVK_113P63121 156 aa7.68□□□□□ -1.18
TPM3-212ENST00000368533 TMEM263Q8WUH6 116 aaKnown RBP7.68□□□□□ -1.18
TPM3-212ENST00000368533 INSP01308 110 aa7.68□□□□□ -1.18
TPM3-212ENST00000368533 C1orf158Q8N1D5 194 aa7.68□□□□□ -1.18
TPM3-212ENST00000368533 TRBV6-5A0A0K0K1A5 114 aa7.67□□□□□ -1.18
TPM3-212ENST00000368533 SMIM9A6NGZ8 99 aa7.67□□□□□ -1.18
TPM3-212ENST00000368533 PRSS2P07478 247 aa7.67□□□□□ -1.18
TPM3-212ENST00000368533 ATXN8Q156A1 80 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms