RNA–Protein interactions for RNA: ENST00000366735.5

MRPL55-209, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL55, Length 1,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-209ENST00000366735 RHOHQ15669 191 aa8.34□□□□□ -1.07
MRPL55-209ENST00000366735 RNASEKQ6P5S7 137 aaKnown RBP8.34□□□□□ -1.07
MRPL55-209ENST00000366735 PRSS3P2Q8NHM4 247 aa8.34□□□□□ -1.07
MRPL55-209ENST00000366735 SAMD10Q9BYL1 202 aa8.34□□□□□ -1.07
MRPL55-209ENST00000366735 NXT2Q9NPJ8 142 aaKnown RBP8.34□□□□□ -1.07
MRPL55-209ENST00000366735 TRAV26-2A0A0B4J265 109 aa8.33□□□□□ -1.08
MRPL55-209ENST00000366735 GATA1P15976 413 aaPredicted RBP8.33□□□□□ -1.08
MRPL55-209ENST00000366735 AKR1D1P51857 326 aa8.33□□□□□ -1.08
MRPL55-209ENST00000366735 CFAP126Q5VTH2 177 aa8.33□□□□□ -1.08
MRPL55-209ENST00000366735 SUMO4Q6EEV6 95 aa8.33□□□□□ -1.08
MRPL55-209ENST00000366735 ZFP2Q6ZN57 461 aa8.33□□□□□ -1.08
MRPL55-209ENST00000366735 FA2HQ7L5A8 372 aa8.33□□□□□ -1.08
MRPL55-209ENST00000366735 TM2D2Q9BX73 214 aa8.33□□□□□ -1.08
MRPL55-209ENST00000366735 TRBV6-5A0A0K0K1A5 114 aa8.32□□□□□ -1.08
MRPL55-209ENST00000366735 IBA57-AS1B1ANH7 110 aa8.32□□□□□ -1.08
MRPL55-209ENST00000366735 M0QY20 66 aa8.32□□□□□ -1.08
MRPL55-209ENST00000366735 IFI27P40305 119 aaPredicted RBP8.32□□□□□ -1.08
MRPL55-209ENST00000366735 LAGE3Q14657 143 aa8.32□□□□□ -1.08
MRPL55-209ENST00000366735 Q8N814 137 aa8.32□□□□□ -1.08
MRPL55-209ENST00000366735 Q8N8P6 123 aa8.32□□□□□ -1.08
MRPL55-209ENST00000366735 OR10D4PQ8NGN7 298 aa8.32□□□□□ -1.08
MRPL55-209ENST00000366735 Q9HAA7 133 aa8.32□□□□□ -1.08
MRPL55-209ENST00000366735 VPS13BQ7Z7G8 4022 aa8.31□□□□□ -1.08
MRPL55-209ENST00000366735 LOC389332A0A1B0GUA5 103 aa8.31□□□□□ -1.08
MRPL55-209ENST00000366735 F5H697 171 aa8.31□□□□□ -1.08
MRPL55-209ENST00000366735 H7C1H1 209 aa8.31□□□□□ -1.08
MRPL55-209ENST00000366735 K7EMI3 77 aa8.31□□□□□ -1.08
MRPL55-209ENST00000366735 AMTP48728 403 aa8.31□□□□□ -1.08
MRPL55-209ENST00000366735 SUMO2P61956 95 aaKnown RBP8.31□□□□□ -1.08
MRPL55-209ENST00000366735 FAM74A4Q5TZK3 123 aa8.31□□□□□ -1.08
MRPL55-209ENST00000366735 FAT1Q14517 4588 aa8.3□□□□□ -1.08
MRPL55-209ENST00000366735 LOC100131303A0A0U1RQF7 123 aa8.3□□□□□ -1.08
MRPL55-209ENST00000366735 TRBV6-4A0A1B0GX49 114 aa8.3□□□□□ -1.08
MRPL55-209ENST00000366735 LRCOL1A6NCL2 159 aa8.3□□□□□ -1.08
MRPL55-209ENST00000366735 ZNF56Q15929 161 aa8.3□□□□□ -1.08
MRPL55-209ENST00000366735 LELP1Q5T871 98 aa8.3□□□□□ -1.08
MRPL55-209ENST00000366735 RPL39LQ96EH5 51 aaKnown RBP8.3□□□□□ -1.08
MRPL55-209ENST00000366735 SMIM2Q9BVW6 85 aa8.3□□□□□ -1.08
MRPL55-209ENST00000366735 IGHV1-24A0A0C4DH33 117 aa8.29□□□□□ -1.08
MRPL55-209ENST00000366735 SMIM6P0DI80 62 aa8.29□□□□□ -1.08
MRPL55-209ENST00000366735 POLR2KP53803 58 aaKnown RBP8.29□□□□□ -1.08
MRPL55-209ENST00000366735 HAMPP81172 84 aa8.29□□□□□ -1.08
MRPL55-209ENST00000366735 FAM19A2Q8N3H0 131 aa8.29□□□□□ -1.08
MRPL55-209ENST00000366735 SLC25A29Q8N8R3 303 aa8.29□□□□□ -1.08
MRPL55-209ENST00000366735 ST20Q9HBF5 79 aa8.29□□□□□ -1.08
MRPL55-209ENST00000366735 NIT2Q9NQR4 276 aa8.29□□□□□ -1.08
MRPL55-209ENST00000366735 FLG2Q5D862 2391 aaPredicted RBP8.29□□□□□ -1.08
MRPL55-209ENST00000366735 TRAV8-3A0A0A6YYJ7 113 aa8.28□□□□□ -1.08
MRPL55-209ENST00000366735 IGHV3-30P01768 117 aa8.28□□□□□ -1.08
MRPL55-209ENST00000366735 IGHV3-33P01772 117 aa8.28□□□□□ -1.08
MRPL55-209ENST00000366735 IGHV3-30-3P0DP02 117 aa8.28□□□□□ -1.08
MRPL55-209ENST00000366735 IGHV3-30-5P0DP03 117 aa8.28□□□□□ -1.08
MRPL55-209ENST00000366735 ATP6V0E2Q8NHE4 81 aa8.28□□□□□ -1.08
MRPL55-209ENST00000366735 GTSF1LQ9H1H1 148 aa8.28□□□□□ -1.08
MRPL55-209ENST00000366735 MYCBP2O75592 4640 aa8.27□□□□□ -1.09
MRPL55-209ENST00000366735 A0A096LNJ9 63 aa8.27□□□□□ -1.09
MRPL55-209ENST00000366735 TRBV27A0A0K0K1C4 114 aa8.27□□□□□ -1.09
MRPL55-209ENST00000366735 VCYO14598 125 aa8.27□□□□□ -1.09
MRPL55-209ENST00000366735 TRIAP1O43715 76 aa8.27□□□□□ -1.09
MRPL55-209ENST00000366735 JOSD1Q15040 202 aaPredicted RBP8.27□□□□□ -1.09
MRPL55-209ENST00000366735 DNAJC30Q96LL9 226 aa8.27□□□□□ -1.09
MRPL55-209ENST00000366735 COX11Q9Y6N1 276 aa8.27□□□□□ -1.09
MRPL55-209ENST00000366735 IGHV3-73A0A0B4J1V6 119 aa8.26□□□□□ -1.09
MRPL55-209ENST00000366735 SDHAF1A6NFY7 115 aa8.26□□□□□ -1.09
MRPL55-209ENST00000366735 C9orf118A6NHY6 69 aa8.26□□□□□ -1.09
MRPL55-209ENST00000366735 HBDP02042 147 aa8.26□□□□□ -1.09
MRPL55-209ENST00000366735 FCER1GP30273 86 aa8.26□□□□□ -1.09
MRPL55-209ENST00000366735 ORMDL2Q53FV1 153 aa8.26□□□□□ -1.09
MRPL55-209ENST00000366735 PYY3Q5JQD4 70 aa8.26□□□□□ -1.09
MRPL55-209ENST00000366735 LINC00518Q8N0U6 118 aa8.26□□□□□ -1.09
MRPL55-209ENST00000366735 RMI2Q96E14 147 aa8.26□□□□□ -1.09
MRPL55-209ENST00000366735 TRBV10-1A0A0K0K1A3 114 aa8.25□□□□□ -1.09
MRPL55-209ENST00000366735 TCAPO15273 167 aa8.25□□□□□ -1.09
MRPL55-209ENST00000366735 LEPROTL1O95214 131 aa8.25□□□□□ -1.09
MRPL55-209ENST00000366735 PMCHL1Q16048 86 aa8.25□□□□□ -1.09
MRPL55-209ENST00000366735 HSPB8Q9UJY1 196 aa8.25□□□□□ -1.09
MRPL55-209ENST00000366735 G0S2P27469 103 aa8.24□□□□□ -1.09
MRPL55-209ENST00000366735 NEXN-AS1Q8NBZ9 246 aa8.24□□□□□ -1.09
MRPL55-209ENST00000366735 DEFB104AQ8WTQ1 72 aa8.24□□□□□ -1.09
MRPL55-209ENST00000366735 SRRM2Q9UQ35 2752 aaKnown RBP8.23□□□□□ -1.09
MRPL55-209ENST00000366735 LINC01549A6NIU2 74 aa8.23□□□□□ -1.09
MRPL55-209ENST00000366735 C3orf79P0CE67 100 aa8.23□□□□□ -1.09
MRPL55-209ENST00000366735 KIR2DL4Q99706 377 aa8.23□□□□□ -1.09
MRPL55-209ENST00000366735 I3L3M4 83 aa8.22□□□□□ -1.09
MRPL55-209ENST00000366735 KRTDAPP60985 99 aa8.22□□□□□ -1.09
MRPL55-209ENST00000366735 Q6ZSA8 131 aa8.22□□□□□ -1.09
MRPL55-209ENST00000366735 C12orf57Q99622 126 aa8.22□□□□□ -1.09
MRPL55-209ENST00000366735 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.21□□□□□ -1.1
MRPL55-209ENST00000366735 KRTAP29-1A8MX34 341 aaPredicted RBP8.21□□□□□ -1.1
MRPL55-209ENST00000366735 TSHBP01222 138 aa8.21□□□□□ -1.1
MRPL55-209ENST00000366735 LINC00173Q6ZV60 143 aa8.21□□□□□ -1.1
MRPL55-209ENST00000366735 Q8N976 141 aa8.21□□□□□ -1.1
MRPL55-209ENST00000366735 MAP1LC3CQ9BXW4 147 aa8.21□□□□□ -1.1
MRPL55-209ENST00000366735 TRBV7-3A0A075B6L6 115 aa8.2□□□□□ -1.1
MRPL55-209ENST00000366735 GAGE12JA6NER3 117 aa8.2□□□□□ -1.1
MRPL55-209ENST00000366735 SYS1-DBNDD2H3BUS1 97 aa8.2□□□□□ -1.1
MRPL55-209ENST00000366735 RPL36AP83881 106 aaKnown RBP8.2□□□□□ -1.1
MRPL55-209ENST00000366735 GAGE1Q13065 139 aa8.2□□□□□ -1.1
MRPL55-209ENST00000366735 GAGE4Q13068 117 aa8.2□□□□□ -1.1
MRPL55-209ENST00000366735 GAGE5Q13069 117 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 1780.7 ms