RNA–Protein interactions for RNA: ENST00000360001.10

SDF4-202, Transcript of stromal cell derived factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SDF4, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-202ENST00000360001 H7C423 109 aa16.06■□□□□ 0.16
SDF4-202ENST00000360001 VCX2Q9H322 139 aa16.06■□□□□ 0.16
SDF4-202ENST00000360001 CSDC2Q9Y534 153 aaKnown RBP16.06■□□□□ 0.16
SDF4-202ENST00000360001 UBE2L6O14933 153 aa16.06■□□□□ 0.16
SDF4-202ENST00000360001 MRPS36P82909 103 aaKnown RBP16.06■□□□□ 0.16
SDF4-202ENST00000360001 RNASE13Q5GAN3 156 aaKnown RBP16.05■□□□□ 0.16
SDF4-202ENST00000360001 SH2D6Q7Z4S9 175 aa16.05■□□□□ 0.16
SDF4-202ENST00000360001 PLNP26678 52 aa16.04■□□□□ 0.16
SDF4-202ENST00000360001 PKIAP61925 76 aa16.04■□□□□ 0.16
SDF4-202ENST00000360001 DEFA6Q01524 100 aa16.04■□□□□ 0.16
SDF4-202ENST00000360001 PRKDCP78527 4128 aaKnown RBP16.04■□□□□ 0.16
SDF4-202ENST00000360001 IGLV4-69A0A075B6H9 119 aa16.04■□□□□ 0.16
SDF4-202ENST00000360001 GAGE6Q13070 117 aa16.04■□□□□ 0.16
SDF4-202ENST00000360001 DGAT2L7PQ6IED9 249 aa16.04■□□□□ 0.16
SDF4-202ENST00000360001 CHCHD5Q9BSY4 110 aa16.04■□□□□ 0.16
SDF4-202ENST00000360001 STAB2Q8WWQ8 2551 aa16.03■□□□□ 0.16
SDF4-202ENST00000360001 HSBP1L1C9JCN9 74 aa16.02■□□□□ 0.16
SDF4-202ENST00000360001 SMAGPQ0VAQ4 97 aa16.02■□□□□ 0.16
SDF4-202ENST00000360001 STPG4Q8N801 248 aa16.02■□□□□ 0.16
SDF4-202ENST00000360001 PCP4L1A6NKN8 68 aa16.02■□□□□ 0.15
SDF4-202ENST00000360001 AMMECR1LQ6DCA0 310 aa16.02■□□□□ 0.15
SDF4-202ENST00000360001 TRAV10A0A0B4J240 114 aa16.01■□□□□ 0.15
SDF4-202ENST00000360001 OR5A1Q8NGJ0 315 aa16.01■□□□□ 0.15
SDF4-202ENST00000360001 TSTD3H0UI37 97 aa16■□□□□ 0.15
SDF4-202ENST00000360001 CDC42SE2Q9NRR3 84 aa16■□□□□ 0.15
SDF4-202ENST00000360001 ZNF25P17030 456 aaPredicted RBP16■□□□□ 0.15
SDF4-202ENST00000360001 C11orf86A6NJI1 115 aa15.99■□□□□ 0.15
SDF4-202ENST00000360001 NHLRC4P0CG21 123 aaPredicted RBP15.99■□□□□ 0.15
SDF4-202ENST00000360001 ANKRD39Q53RE8 183 aa15.99■□□□□ 0.15
SDF4-202ENST00000360001 TMEM101Q96IK0 257 aa15.98■□□□□ 0.15
SDF4-202ENST00000360001 NFE4Q86UQ8 179 aa15.97■□□□□ 0.15
SDF4-202ENST00000360001 IGLV4-60A0A075B6I1 120 aa15.96■□□□□ 0.15
SDF4-202ENST00000360001 A0A0J9YXV3 536 aa15.96■□□□□ 0.15
SDF4-202ENST00000360001 IGLC3P0DOY3 106 aa15.96■□□□□ 0.15
SDF4-202ENST00000360001 LELP1Q5T871 98 aa15.96■□□□□ 0.15
SDF4-202ENST00000360001 LYPD5Q6UWN5 251 aa15.96■□□□□ 0.15
SDF4-202ENST00000360001 C2orf88Q9BSF0 95 aa15.96■□□□□ 0.15
SDF4-202ENST00000360001 TCTAP57738 103 aa15.95■□□□□ 0.14
SDF4-202ENST00000360001 TIRAPP58753 221 aa15.95■□□□□ 0.14
SDF4-202ENST00000360001 UBE2D1P51668 147 aa15.95■□□□□ 0.14
SDF4-202ENST00000360001 CHAC1Q9BUX1 264 aa15.95■□□□□ 0.14
SDF4-202ENST00000360001 TMEM262E9PQX1 116 aa15.94■□□□□ 0.14
SDF4-202ENST00000360001 MPV17L2Q567V2 206 aa15.94■□□□□ 0.14
SDF4-202ENST00000360001 C14orf144Q96I85 54 aa15.94■□□□□ 0.14
SDF4-202ENST00000360001 A0A1B0GUV1 79 aa15.93■□□□□ 0.14
SDF4-202ENST00000360001 RBX1P62877 108 aa15.93■□□□□ 0.14
SDF4-202ENST00000360001 IGKV2D-26A0A0A0MRZ7 120 aa15.91■□□□□ 0.14
SDF4-202ENST00000360001 MIEN1Q9BRT3 115 aa15.91■□□□□ 0.14
SDF4-202ENST00000360001 TINCRA0A1B0GVN0 87 aa15.9■□□□□ 0.14
SDF4-202ENST00000360001 ZNF22P17026 224 aaPredicted RBP15.9■□□□□ 0.14
SDF4-202ENST00000360001 TMEM170BQ5T4T1 132 aa15.89■□□□□ 0.13
SDF4-202ENST00000360001 DDTP30046 118 aa15.89■□□□□ 0.13
SDF4-202ENST00000360001 UQCR10Q9UDW1 63 aa15.89■□□□□ 0.13
SDF4-202ENST00000360001 TRAV13-1A0A0B4J241 112 aa15.88■□□□□ 0.13
SDF4-202ENST00000360001 ESRGQ1W209 222 aa15.88■□□□□ 0.13
SDF4-202ENST00000360001 FAM19A3Q7Z5A8 133 aa15.88■□□□□ 0.13
SDF4-202ENST00000360001 Q8N3U1 123 aa15.88■□□□□ 0.13
SDF4-202ENST00000360001 C15orf53Q8NAA6 179 aa15.88■□□□□ 0.13
SDF4-202ENST00000360001 COX8AP10176 69 aa15.87■□□□□ 0.13
SDF4-202ENST00000360001 NMUP48645 174 aa15.87■□□□□ 0.13
SDF4-202ENST00000360001 LINC00242Q5T6M2 205 aa15.87■□□□□ 0.13
SDF4-202ENST00000360001 TP73-AS1Q9UF72 201 aa15.87■□□□□ 0.13
SDF4-202ENST00000360001 E9PLD3 99 aa15.86■□□□□ 0.13
SDF4-202ENST00000360001 TRAV8-6A0A0B4J262 113 aa15.85■□□□□ 0.13
SDF4-202ENST00000360001 COX6A2Q02221 97 aa15.85■□□□□ 0.13
SDF4-202ENST00000360001 PCP2Q8IVA1 136 aa15.85■□□□□ 0.13
SDF4-202ENST00000360001 SLC25A34Q6PIV7 304 aa15.84■□□□□ 0.13
SDF4-202ENST00000360001 GEMIN7Q9H840 131 aaKnown RBP15.84■□□□□ 0.13
SDF4-202ENST00000360001 TMEM223A0PJW6 202 aa15.84■□□□□ 0.13
SDF4-202ENST00000360001 IGLL5B9A064 214 aa15.84■□□□□ 0.13
SDF4-202ENST00000360001 IGLV5-45A0A087WSX0 123 aa15.83■□□□□ 0.12
SDF4-202ENST00000360001 IGKV3OR2-268A0A0C4DH90 116 aa15.83■□□□□ 0.12
SDF4-202ENST00000360001 HERVK_113P61574 105 aa15.83■□□□□ 0.12
SDF4-202ENST00000360001 SEC11AP67812 179 aa15.83■□□□□ 0.12
SDF4-202ENST00000360001 DYNC2H1Q8NCM8 4307 aaKnown RBP15.83■□□□□ 0.12
SDF4-202ENST00000360001 LINC00587B1AMM8 73 aa15.82■□□□□ 0.12
SDF4-202ENST00000360001 HERVK_113P63121 156 aa15.82■□□□□ 0.12
SDF4-202ENST00000360001 WFDC10BQ8IUB3 73 aa15.82■□□□□ 0.12
SDF4-202ENST00000360001 LINC00469Q8N7U9 141 aa15.82■□□□□ 0.12
SDF4-202ENST00000360001 TTTY13Q9BZ97 58 aa15.82■□□□□ 0.12
SDF4-202ENST00000360001 BOD1L2Q8IYS8 172 aa15.82■□□□□ 0.12
SDF4-202ENST00000360001 CDKN2A-AS1Q9UH64 79 aa15.82■□□□□ 0.12
SDF4-202ENST00000360001 ANGP03950 147 aaKnown RBP15.8■□□□□ 0.12
SDF4-202ENST00000360001 LINC00959A0A1B0GUT2 108 aa15.8■□□□□ 0.12
SDF4-202ENST00000360001 LINC00269Q8N2A0 174 aa15.8■□□□□ 0.12
SDF4-202ENST00000360001 CLPSL2Q6UWE3 100 aa15.79■□□□□ 0.12
SDF4-202ENST00000360001 FBN3Q75N90 2809 aa15.79■□□□□ 0.12
SDF4-202ENST00000360001 DLEU1O43261 78 aa15.78■□□□□ 0.12
SDF4-202ENST00000360001 MAPKAPK5-AS1Q8N8E1 139 aa15.78■□□□□ 0.12
SDF4-202ENST00000360001 IGHV3-64A0A075B6Q5 118 aa15.76■□□□□ 0.11
SDF4-202ENST00000360001 HNRNPA3P51991 378 aaKnown RBP15.76■□□□□ 0.11
SDF4-202ENST00000360001 TSPEAR-AS2P59090 65 aa15.76■□□□□ 0.11
SDF4-202ENST00000360001 DNAH7Q8WXX0 4024 aa15.76■□□□□ 0.11
SDF4-202ENST00000360001 IGHV3-30P01768 117 aa15.76■□□□□ 0.11
SDF4-202ENST00000360001 IGHV3-33P01772 117 aa15.76■□□□□ 0.11
SDF4-202ENST00000360001 SPINK8P0C7L1 97 aa15.76■□□□□ 0.11
SDF4-202ENST00000360001 IGHV3-30-3P0DP02 117 aa15.76■□□□□ 0.11
SDF4-202ENST00000360001 IGHV3-30-5P0DP03 117 aa15.76■□□□□ 0.11
SDF4-202ENST00000360001 REG3AQ06141 175 aa15.76■□□□□ 0.11
SDF4-202ENST00000360001 TRAV8-3A0A0A6YYJ7 113 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms