RNA–Protein interactions for RNA: ENST00000359979.8

CCSER2-202, Transcript of coiled-coil serine rich protein 2, humanhuman

TSL 1 (best) BASIC

Gene CCSER2, Length 2,066 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER2-202ENST00000359979 PRRC2AP48634 2157 aaKnown RBP16.14■□□□□ 0.17
CCSER2-202ENST00000359979 COX6CP09669 75 aa16.14■□□□□ 0.17
CCSER2-202ENST00000359979 DGAT2L7PQ6IED9 249 aa16.14■□□□□ 0.17
CCSER2-202ENST00000359979 CSMD2Q7Z408 3487 aa16.13■□□□□ 0.17
CCSER2-202ENST00000359979 ANKRD17O75179 2603 aaKnown RBP16.13■□□□□ 0.17
CCSER2-202ENST00000359979 RPL13AP40429 203 aaKnown RBP16.12■□□□□ 0.17
CCSER2-202ENST00000359979 ODF3L2Q3SX64 289 aa16.12■□□□□ 0.17
CCSER2-202ENST00000359979 FAM19A3Q7Z5A8 133 aa16.12■□□□□ 0.17
CCSER2-202ENST00000359979 TMEM101Q96IK0 257 aa16.12■□□□□ 0.17
CCSER2-202ENST00000359979 CREBBPQ92793 2442 aa16.12■□□□□ 0.17
CCSER2-202ENST00000359979 HERVK_113P63121 156 aa16.12■□□□□ 0.17
CCSER2-202ENST00000359979 XCL2Q9UBD3 114 aa16.11■□□□□ 0.17
CCSER2-202ENST00000359979 STHQ8IWL8 128 aa16.1■□□□□ 0.17
CCSER2-202ENST00000359979 NTN5Q8WTR8 489 aaPredicted RBP16.1■□□□□ 0.17
CCSER2-202ENST00000359979 FBN2P35556 2912 aa16.1■□□□□ 0.17
CCSER2-202ENST00000359979 IGLV5-39A0A0G2JS06 123 aa16.1■□□□□ 0.17
CCSER2-202ENST00000359979 TRBV10-1A0A0K0K1A3 114 aa16.1■□□□□ 0.17
CCSER2-202ENST00000359979 C1orf158Q8N1D5 194 aa16.1■□□□□ 0.17
CCSER2-202ENST00000359979 CSDC2Q9Y534 153 aaKnown RBP16.1■□□□□ 0.17
CCSER2-202ENST00000359979 PTPN13Q12923 2485 aa16.09■□□□□ 0.17
CCSER2-202ENST00000359979 IGHV3OR16-12A0A075B7B8 117 aa16.09■□□□□ 0.17
CCSER2-202ENST00000359979 KRTAP10-9P60411 292 aa16.09■□□□□ 0.17
CCSER2-202ENST00000359979 CIRBPQ14011 172 aaKnown RBP16.09■□□□□ 0.17
CCSER2-202ENST00000359979 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.09■□□□□ 0.17
CCSER2-202ENST00000359979 ZANQ9Y493 2812 aa16.08■□□□□ 0.16
CCSER2-202ENST00000359979 TRGV1A0A0A0MS02 117 aa16.07■□□□□ 0.16
CCSER2-202ENST00000359979 LINC00242Q5T6M2 205 aa16.07■□□□□ 0.16
CCSER2-202ENST00000359979 Q96MF0 132 aa16.07■□□□□ 0.16
CCSER2-202ENST00000359979 H3BT86 120 aa16.07■□□□□ 0.16
CCSER2-202ENST00000359979 NPC2P61916 151 aa16.07■□□□□ 0.16
CCSER2-202ENST00000359979 RPL36AP83881 106 aaKnown RBP16.07■□□□□ 0.16
CCSER2-202ENST00000359979 COX6A2Q02221 97 aa16.07■□□□□ 0.16
CCSER2-202ENST00000359979 DAZ2Q13117 558 aaKnown RBP16.07■□□□□ 0.16
CCSER2-202ENST00000359979 Q6ZSV7 163 aa16.07■□□□□ 0.16
CCSER2-202ENST00000359979 DAZ4Q86SG3 579 aaKnown RBP16.07■□□□□ 0.16
CCSER2-202ENST00000359979 RPL36ALQ969Q0 106 aaKnown RBP16.07■□□□□ 0.16
CCSER2-202ENST00000359979 DAZ3Q9NR90 486 aaKnown RBP16.07■□□□□ 0.16
CCSER2-202ENST00000359979 MXRA5Q9NR99 2828 aa16.07■□□□□ 0.16
CCSER2-202ENST00000359979 K7EQD1 137 aa16.06■□□□□ 0.16
CCSER2-202ENST00000359979 NBPF19A0A087WUL8 3843 aa16.05■□□□□ 0.16
CCSER2-202ENST00000359979 H7C423 109 aa16.04■□□□□ 0.16
CCSER2-202ENST00000359979 LST1O00453 97 aa16.04■□□□□ 0.16
CCSER2-202ENST00000359979 C2orf82Q6UX34 121 aa16.04■□□□□ 0.16
CCSER2-202ENST00000359979 TRAV4A0A0B4J268 109 aa16.04■□□□□ 0.16
CCSER2-202ENST00000359979 TEX29Q8N6K0 151 aa16.04■□□□□ 0.16
CCSER2-202ENST00000359979 COPS9Q8WXC6 57 aa16.04■□□□□ 0.16
CCSER2-202ENST00000359979 UBE2WQ96B02 151 aa16.04■□□□□ 0.16
CCSER2-202ENST00000359979 TEX49A0A1B0GTD5 131 aa16.03■□□□□ 0.16
CCSER2-202ENST00000359979 LINC00694P0DN24 101 aa16.03■□□□□ 0.16
CCSER2-202ENST00000359979 Q9H8V8 135 aa16.03■□□□□ 0.16
CCSER2-202ENST00000359979 LINC00308Q8TCZ7 52 aa16.02■□□□□ 0.15
CCSER2-202ENST00000359979 CITED1Q99966 193 aa16.02■□□□□ 0.15
CCSER2-202ENST00000359979 ABCA12Q86UK0 2595 aa16.02■□□□□ 0.15
CCSER2-202ENST00000359979 SMIM1B2RUZ4 78 aa16.01■□□□□ 0.15
CCSER2-202ENST00000359979 DAND5Q8N907 189 aa16.01■□□□□ 0.15
CCSER2-202ENST00000359979 NTM-AS1Q6ZSK4 140 aa16.01■□□□□ 0.15
CCSER2-202ENST00000359979 KRTAP1-3Q8IUG1 177 aa16.01■□□□□ 0.15
CCSER2-202ENST00000359979 CCL24O00175 119 aa16■□□□□ 0.15
CCSER2-202ENST00000359979 HIST2H2BDQ6DRA6 164 aa16■□□□□ 0.15
CCSER2-202ENST00000359979 Q6ZTI0 123 aa16■□□□□ 0.15
CCSER2-202ENST00000359979 TRAV8-4A0A0B4J246 113 aa15.99■□□□□ 0.15
CCSER2-202ENST00000359979 CLEC2BQ92478 149 aa15.99■□□□□ 0.15
CCSER2-202ENST00000359979 CITED2Q99967 270 aaPredicted RBP15.99■□□□□ 0.15
CCSER2-202ENST00000359979 APCP25054 2843 aa15.99■□□□□ 0.15
CCSER2-202ENST00000359979 HIST2H2BCQ6DN03 193 aa15.99■□□□□ 0.15
CCSER2-202ENST00000359979 CDC42SE2Q9NRR3 84 aa15.99■□□□□ 0.15
CCSER2-202ENST00000359979 HECTD1Q9ULT8 2610 aa15.99■□□□□ 0.15
CCSER2-202ENST00000359979 POLQO75417 2590 aa15.98■□□□□ 0.15
CCSER2-202ENST00000359979 CMC4P56277 68 aaPredicted RBP15.98■□□□□ 0.15
CCSER2-202ENST00000359979 PPDPFQ9H3Y8 114 aa15.98■□□□□ 0.15
CCSER2-202ENST00000359979 DNAJC9-AS1A6NH13 148 aa15.98■□□□□ 0.15
CCSER2-202ENST00000359979 ZNF625Q96I27 306 aaPredicted RBP15.97■□□□□ 0.15
CCSER2-202ENST00000359979 TRAV13-1A0A0B4J241 112 aa15.96■□□□□ 0.15
CCSER2-202ENST00000359979 F5H768 121 aa15.96■□□□□ 0.15
CCSER2-202ENST00000359979 SNCGO76070 127 aa15.96■□□□□ 0.15
CCSER2-202ENST00000359979 HERV-K104P63124 156 aa15.96■□□□□ 0.15
CCSER2-202ENST00000359979 NDUFA7O95182 113 aa15.95■□□□□ 0.14
CCSER2-202ENST00000359979 DEFB121Q5J5C9 76 aa15.95■□□□□ 0.14
CCSER2-202ENST00000359979 GAGE12JA6NER3 117 aa15.95■□□□□ 0.14
CCSER2-202ENST00000359979 GAGE4Q13068 117 aa15.95■□□□□ 0.14
CCSER2-202ENST00000359979 GAGE5Q13069 117 aa15.95■□□□□ 0.14
CCSER2-202ENST00000359979 A0A1W2PRX2 142 aa15.94■□□□□ 0.14
CCSER2-202ENST00000359979 PRIMA1Q86XR5 153 aa15.93■□□□□ 0.14
CCSER2-202ENST00000359979 C16orf74Q96GX8 76 aa15.93■□□□□ 0.14
CCSER2-202ENST00000359979 TMEM243Q9BU79 118 aa15.93■□□□□ 0.14
CCSER2-202ENST00000359979 NOP10Q9NPE3 64 aaKnown RBP15.93■□□□□ 0.14
CCSER2-202ENST00000359979 UNC79Q9P2D8 2635 aa15.93■□□□□ 0.14
CCSER2-202ENST00000359979 ITPR2Q14571 2701 aa15.92■□□□□ 0.14
CCSER2-202ENST00000359979 FAM240AA0A1B0GVK7 77 aa15.92■□□□□ 0.14
CCSER2-202ENST00000359979 UBE2L6O14933 153 aa15.92■□□□□ 0.14
CCSER2-202ENST00000359979 COX7A2LO14548 114 aa15.91■□□□□ 0.14
CCSER2-202ENST00000359979 GAGE2BQ13066 116 aa15.91■□□□□ 0.14
CCSER2-202ENST00000359979 GAGE2EQ4V326 116 aa15.91■□□□□ 0.14
CCSER2-202ENST00000359979 Q6Q795 121 aa15.91■□□□□ 0.14
CCSER2-202ENST00000359979 SHISA2Q6UWI4 295 aa15.91■□□□□ 0.14
CCSER2-202ENST00000359979 SOSTDC1Q6X4U4 206 aa15.91■□□□□ 0.14
CCSER2-202ENST00000359979 C11orf44Q8N8P7 122 aa15.91■□□□□ 0.14
CCSER2-202ENST00000359979 GAGE2DQ9UEU5 116 aa15.91■□□□□ 0.14
CCSER2-202ENST00000359979 AKAP9Q99996 3911 aa15.91■□□□□ 0.14
CCSER2-202ENST00000359979 GIG44P09565 113 aaPredicted RBP15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms