RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 SRSF9Q13242 221 aaKnown RBP eCLIP10.48□□□□□ -0.73
CXCL12-201ENST00000343575 SCGB1D4Q6XE38 83 aa10.48□□□□□ -0.73
CXCL12-201ENST00000343575 TEN1Q86WV5 123 aa10.48□□□□□ -0.73
CXCL12-201ENST00000343575 GEMIN7Q9H840 131 aaKnown RBP10.48□□□□□ -0.73
CXCL12-201ENST00000343575 SBSPONQ8IVN8 264 aa10.47□□□□□ -0.73
CXCL12-201ENST00000343575 Q8NAQ8 132 aa10.47□□□□□ -0.73
CXCL12-201ENST00000343575 BAALCQ8WXS3 180 aa10.47□□□□□ -0.73
CXCL12-201ENST00000343575 CDIP1Q9H305 208 aa10.47□□□□□ -0.73
CXCL12-201ENST00000343575 RETNQ9HD89 108 aa10.47□□□□□ -0.73
CXCL12-201ENST00000343575 SPINK8P0C7L1 97 aa10.47□□□□□ -0.73
CXCL12-201ENST00000343575 C2orf66Q6UXQ4 117 aa10.47□□□□□ -0.73
CXCL12-201ENST00000343575 TRGV1A0A0A0MS02 117 aa10.46□□□□□ -0.74
CXCL12-201ENST00000343575 PRSS29PA6NIE9 313 aa10.46□□□□□ -0.74
CXCL12-201ENST00000343575 TSPAN13O95857 204 aa10.46□□□□□ -0.74
CXCL12-201ENST00000343575 EMP1P54849 157 aa10.46□□□□□ -0.74
CXCL12-201ENST00000343575 IGHV4-28A0A0C4DH34 117 aa10.45□□□□□ -0.74
CXCL12-201ENST00000343575 DEFB4AO15263 64 aa10.45□□□□□ -0.74
CXCL12-201ENST00000343575 PSMB2P49721 201 aa10.45□□□□□ -0.74
CXCL12-201ENST00000343575 FAM74A4Q5TZK3 123 aa10.45□□□□□ -0.74
CXCL12-201ENST00000343575 LOC107984156A0A0G2JMH3 177 aa10.44□□□□□ -0.74
CXCL12-201ENST00000343575 A8MWV9 139 aa10.44□□□□□ -0.74
CXCL12-201ENST00000343575 RS1O15537 224 aa10.44□□□□□ -0.74
CXCL12-201ENST00000343575 SMCPP49901 116 aaPredicted RBP10.44□□□□□ -0.74
CXCL12-201ENST00000343575 Q6ZUT4 128 aa10.44□□□□□ -0.74
CXCL12-201ENST00000343575 ARL17AQ8IVW1 177 aa10.44□□□□□ -0.74
CXCL12-201ENST00000343575 LINC00612Q8N6U2 182 aa10.44□□□□□ -0.74
CXCL12-201ENST00000343575 TMEM141Q96I45 108 aa10.44□□□□□ -0.74
CXCL12-201ENST00000343575 TP53TG1Q9Y2A0 90 aa10.44□□□□□ -0.74
CXCL12-201ENST00000343575 TENM3Q9P273 2699 aa10.44□□□□□ -0.74
CXCL12-201ENST00000343575 MGPP08493 103 aa10.44□□□□□ -0.74
CXCL12-201ENST00000343575 Q6ZSN1 163 aa10.44□□□□□ -0.74
CXCL12-201ENST00000343575 IGHV3-73A0A0B4J1V6 119 aa10.43□□□□□ -0.74
CXCL12-201ENST00000343575 MIFP14174 115 aa10.43□□□□□ -0.74
CXCL12-201ENST00000343575 SUMO4Q6EEV6 95 aa10.43□□□□□ -0.74
CXCL12-201ENST00000343575 GAGE7O76087 117 aa10.42□□□□□ -0.74
CXCL12-201ENST00000343575 GAGE12FP0CL80 117 aa10.42□□□□□ -0.74
CXCL12-201ENST00000343575 GAGE12GP0CL81 117 aa10.42□□□□□ -0.74
CXCL12-201ENST00000343575 GAGE12IP0CL82 117 aa10.42□□□□□ -0.74
CXCL12-201ENST00000343575 DEFB121Q5J5C9 76 aa10.42□□□□□ -0.74
CXCL12-201ENST00000343575 TRAV26-1A0A087WT03 109 aa10.42□□□□□ -0.74
CXCL12-201ENST00000343575 NFE4Q86UQ8 179 aa10.42□□□□□ -0.74
CXCL12-201ENST00000343575 RPL39LQ96EH5 51 aaKnown RBP10.42□□□□□ -0.74
CXCL12-201ENST00000343575 Q9UF83 564 aa10.42□□□□□ -0.74
CXCL12-201ENST00000343575 A0A0J9YY99 117 aa10.41□□□□□ -0.74
CXCL12-201ENST00000343575 C11orf86A6NJI1 115 aa10.41□□□□□ -0.74
CXCL12-201ENST00000343575 M0QY20 66 aa10.41□□□□□ -0.74
CXCL12-201ENST00000343575 PMVKQ15126 192 aa10.41□□□□□ -0.74
CXCL12-201ENST00000343575 FAM222AQ5U5X8 452 aa10.41□□□□□ -0.74
CXCL12-201ENST00000343575 C10orf126Q8N4M7 172 aa10.41□□□□□ -0.74
CXCL12-201ENST00000343575 TIMM17AQ99595 171 aa10.41□□□□□ -0.74
CXCL12-201ENST00000343575 ERG28Q9UKR5 140 aa10.41□□□□□ -0.74
CXCL12-201ENST00000343575 ZNF56Q15929 161 aa10.4□□□□□ -0.74
CXCL12-201ENST00000343575 SLC25A29Q8N8R3 303 aa10.4□□□□□ -0.74
CXCL12-201ENST00000343575 CELA1Q9UNI1 258 aa10.4□□□□□ -0.74
CXCL12-201ENST00000343575 TRAV4A0A0B4J268 109 aa10.4□□□□□ -0.75
CXCL12-201ENST00000343575 F5H697 171 aa10.4□□□□□ -0.75
CXCL12-201ENST00000343575 ZFP2Q6ZN57 461 aa10.4□□□□□ -0.75
CXCL12-201ENST00000343575 TM2D3Q9BRN9 247 aa10.4□□□□□ -0.75
CXCL12-201ENST00000343575 PRO1854Q9UHT4 67 aa10.4□□□□□ -0.75
CXCL12-201ENST00000343575 IGHV3-53P01767 116 aa10.39□□□□□ -0.75
CXCL12-201ENST00000343575 MT-ATP8P03928 68 aa10.39□□□□□ -0.75
CXCL12-201ENST00000343575 DEFB130BP0DP73 79 aa10.39□□□□□ -0.75
CXCL12-201ENST00000343575 DEFB130AP0DP74 79 aa10.39□□□□□ -0.75
CXCL12-201ENST00000343575 MRAPQ8TCY5 172 aa10.39□□□□□ -0.75
CXCL12-201ENST00000343575 PLEKHB2Q96CS7 222 aa10.39□□□□□ -0.75
CXCL12-201ENST00000343575 SPANXA1Q9NS26 97 aa10.39□□□□□ -0.75
CXCL12-201ENST00000343575 LYRM9A8MSI8 78 aa10.38□□□□□ -0.75
CXCL12-201ENST00000343575 VCYO14598 125 aa10.38□□□□□ -0.75
CXCL12-201ENST00000343575 IGHV3-30P01768 117 aa10.38□□□□□ -0.75
CXCL12-201ENST00000343575 P0DMU3 169 aa10.38□□□□□ -0.75
CXCL12-201ENST00000343575 FAM231AP0DMU4 169 aa10.38□□□□□ -0.75
CXCL12-201ENST00000343575 FAM231CP0DMU5 169 aa10.38□□□□□ -0.75
CXCL12-201ENST00000343575 IGHV3-30-5P0DP03 117 aa10.38□□□□□ -0.75
CXCL12-201ENST00000343575 XGP55808 180 aa10.38□□□□□ -0.75
CXCL12-201ENST00000343575 ZFAND6Q6FIF0 208 aa10.38□□□□□ -0.75
CXCL12-201ENST00000343575 CARD19Q96LW7 228 aa10.38□□□□□ -0.75
CXCL12-201ENST00000343575 LINC01600Q96MT4 127 aa10.38□□□□□ -0.75
CXCL12-201ENST00000343575 EDA2RQ9HAV5 297 aa10.38□□□□□ -0.75
CXCL12-201ENST00000343575 TRGV2A0A075B6R0 118 aa10.38□□□□□ -0.75
CXCL12-201ENST00000343575 RHODO00212 210 aa10.38□□□□□ -0.75
CXCL12-201ENST00000343575 TCL1BO95988 128 aa10.38□□□□□ -0.75
CXCL12-201ENST00000343575 SCGB1C2P0DMR2 95 aa10.38□□□□□ -0.75
CXCL12-201ENST00000343575 IGLV4-69A0A075B6H9 119 aa10.37□□□□□ -0.75
CXCL12-201ENST00000343575 IGIPA6NJ69 53 aa10.37□□□□□ -0.75
CXCL12-201ENST00000343575 KIR2DL4Q99706 377 aa10.37□□□□□ -0.75
CXCL12-201ENST00000343575 HUWE1Q7Z6Z7 4374 aaKnown RBP10.37□□□□□ -0.75
CXCL12-201ENST00000343575 CFC1BP0CG36 223 aa10.36□□□□□ -0.75
CXCL12-201ENST00000343575 CFC1P0CG37 223 aa10.36□□□□□ -0.75
CXCL12-201ENST00000343575 FHL2Q14192 279 aa10.36□□□□□ -0.75
CXCL12-201ENST00000343575 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.35□□□□□ -0.75
CXCL12-201ENST00000343575 A0A0B4J2C4 111 aa10.35□□□□□ -0.75
CXCL12-201ENST00000343575 TRBV6-5A0A0K0K1A5 114 aa10.35□□□□□ -0.75
CXCL12-201ENST00000343575 LGALS3P17931 250 aaKnown RBP10.35□□□□□ -0.75
CXCL12-201ENST00000343575 POLR2KP53803 58 aaKnown RBP10.35□□□□□ -0.75
CXCL12-201ENST00000343575 ANAPC13Q9BS18 74 aa10.35□□□□□ -0.75
CXCL12-201ENST00000343575 ANKRD29Q8N6D5 301 aa10.34□□□□□ -0.75
CXCL12-201ENST00000343575 C11orf68Q9H3H3 251 aaKnown RBP10.34□□□□□ -0.75
CXCL12-201ENST00000343575 J3QQQ9 107 aa10.34□□□□□ -0.75
CXCL12-201ENST00000343575 SLC25A20O43772 301 aa10.34□□□□□ -0.75
CXCL12-201ENST00000343575 SPART-AS1P0CW21 52 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms