RNA–Protein interactions for RNA: ENST00000341307.6

RTN3-203, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-203ENST00000341307 A0A087WVE0 104 aa8.75□□□□□ -1.01
RTN3-203ENST00000341307 LY6EQ16553 131 aa8.75□□□□□ -1.01
RTN3-203ENST00000341307 DEFB113Q30KQ7 82 aa8.75□□□□□ -1.01
RTN3-203ENST00000341307 C9orf139Q6ZV77 190 aa8.75□□□□□ -1.01
RTN3-203ENST00000341307 ADARB2-AS1A8MUL3 147 aa8.74□□□□□ -1.01
RTN3-203ENST00000341307 GPHB5Q86YW7 130 aa8.74□□□□□ -1.01
RTN3-203ENST00000341307 C5orf56Q8N8D9 126 aa8.74□□□□□ -1.01
RTN3-203ENST00000341307 DAND5Q8N907 189 aa8.74□□□□□ -1.01
RTN3-203ENST00000341307 MSMBP08118 114 aa8.74□□□□□ -1.01
RTN3-203ENST00000341307 PSMB8P28062 276 aa8.74□□□□□ -1.01
RTN3-203ENST00000341307 C15orf32Q32M92 178 aa8.74□□□□□ -1.01
RTN3-203ENST00000341307 KRTAP1-3Q8IUG1 177 aa8.74□□□□□ -1.01
RTN3-203ENST00000341307 LINC01561Q8N1V8 128 aa8.74□□□□□ -1.01
RTN3-203ENST00000341307 TMEM141Q96I45 108 aa8.74□□□□□ -1.01
RTN3-203ENST00000341307 NIPBLQ6KC79 2804 aaeCLIP8.73□□□□□ -1.01
RTN3-203ENST00000341307 CTSGP08311 255 aa8.73□□□□□ -1.01
RTN3-203ENST00000341307 NPC2P61916 151 aa8.73□□□□□ -1.01
RTN3-203ENST00000341307 PRIMA1Q86XR5 153 aa8.73□□□□□ -1.01
RTN3-203ENST00000341307 FAM223AQ8IWN6 122 aa8.73□□□□□ -1.01
RTN3-203ENST00000341307 TMEM61Q8N0U2 210 aa8.73□□□□□ -1.01
RTN3-203ENST00000341307 TIMM17AQ99595 171 aa8.73□□□□□ -1.01
RTN3-203ENST00000341307 USP17L23D6RBM5 183 aa8.73□□□□□ -1.01
RTN3-203ENST00000341307 M0R381 172 aa8.73□□□□□ -1.01
RTN3-203ENST00000341307 F8P00451 2351 aa8.72□□□□□ -1.01
RTN3-203ENST00000341307 TRAV12-3A0A0B4J271 114 aa8.72□□□□□ -1.01
RTN3-203ENST00000341307 IGKV3D-7A0A0C4DH55 119 aa8.72□□□□□ -1.01
RTN3-203ENST00000341307 FAM223BA6NKX1 122 aa8.72□□□□□ -1.01
RTN3-203ENST00000341307 NDUFC2-KCTD14E9PQ53 114 aa8.72□□□□□ -1.01
RTN3-203ENST00000341307 BUB3O43684 328 aa8.72□□□□□ -1.01
RTN3-203ENST00000341307 C1orf195Q5TG92 126 aa8.72□□□□□ -1.01
RTN3-203ENST00000341307 RNF182Q8N6D2 247 aa8.72□□□□□ -1.01
RTN3-203ENST00000341307 FAM110DQ8TAY7 271 aaPredicted RBP8.72□□□□□ -1.01
RTN3-203ENST00000341307 H3BUX3 64 aa8.71□□□□□ -1.02
RTN3-203ENST00000341307 MGPP08493 103 aa8.71□□□□□ -1.02
RTN3-203ENST00000341307 BEAN1Q3B7T3 259 aa8.71□□□□□ -1.02
RTN3-203ENST00000341307 OPRPNQ99935 248 aaPredicted RBP8.71□□□□□ -1.02
RTN3-203ENST00000341307 TRAV12-2A0A075B6T6 113 aa8.71□□□□□ -1.02
RTN3-203ENST00000341307 CLEC19AQ6UXS0 136 aa8.71□□□□□ -1.02
RTN3-203ENST00000341307 Q96MF0 132 aa8.71□□□□□ -1.02
RTN3-203ENST00000341307 FP248Q71RG6 208 aaPredicted RBP8.7□□□□□ -1.02
RTN3-203ENST00000341307 CCDC140Q96MF4 163 aa8.7□□□□□ -1.02
RTN3-203ENST00000341307 SMR3AQ99954 134 aa8.7□□□□□ -1.02
RTN3-203ENST00000341307 MOB4Q9Y3A3 225 aa8.7□□□□□ -1.02
RTN3-203ENST00000341307 IGHV3OR16-13A0A075B7E8 117 aa8.7□□□□□ -1.02
RTN3-203ENST00000341307 IGHV3-74A0A0B4J1X5 117 aa8.7□□□□□ -1.02
RTN3-203ENST00000341307 IGHV3-66A0A0C4DH42 116 aa8.7□□□□□ -1.02
RTN3-203ENST00000341307 NDUFC2O95298 119 aa8.7□□□□□ -1.02
RTN3-203ENST00000341307 SONP18583 2426 aaKnown RBP8.69□□□□□ -1.02
RTN3-203ENST00000341307 A0A0U1RQV1 116 aa8.69□□□□□ -1.02
RTN3-203ENST00000341307 B4DSR2 109 aa8.69□□□□□ -1.02
RTN3-203ENST00000341307 BLCAPP62952 87 aa8.69□□□□□ -1.02
RTN3-203ENST00000341307 MIAQ16674 131 aa8.69□□□□□ -1.02
RTN3-203ENST00000341307 C16orf92Q96LL3 132 aa8.69□□□□□ -1.02
RTN3-203ENST00000341307 ZFAND3Q9H8U3 227 aa8.69□□□□□ -1.02
RTN3-203ENST00000341307 SERP1Q9Y6X1 66 aa8.69□□□□□ -1.02
RTN3-203ENST00000341307 Q6JHZ5 121 aa8.69□□□□□ -1.02
RTN3-203ENST00000341307 IGHV3-49A0A0A0MS15 119 aa8.68□□□□□ -1.02
RTN3-203ENST00000341307 PF4P02776 101 aa8.68□□□□□ -1.02
RTN3-203ENST00000341307 BAALC-AS2P0C853 105 aa8.68□□□□□ -1.02
RTN3-203ENST00000341307 IGHV3-30-3P0DP02 117 aa8.68□□□□□ -1.02
RTN3-203ENST00000341307 POLR2KP53803 58 aaKnown RBP8.68□□□□□ -1.02
RTN3-203ENST00000341307 TMEM243Q9BU79 118 aa8.68□□□□□ -1.02
RTN3-203ENST00000341307 COX7A2LO14548 114 aa8.68□□□□□ -1.02
RTN3-203ENST00000341307 PRR9Q5T870 116 aa8.68□□□□□ -1.02
RTN3-203ENST00000341307 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.67□□□□□ -1.021e-8■■■■□ 24
RTN3-203ENST00000341307 A0A096LNT2 108 aa8.66□□□□□ -1.02
RTN3-203ENST00000341307 A0A0J9YXV3 536 aa8.66□□□□□ -1.02
RTN3-203ENST00000341307 C9orf47Q6ZRZ4 202 aa8.66□□□□□ -1.02
RTN3-203ENST00000341307 SETD2Q9BYW2 2564 aaPredicted RBP8.66□□□□□ -1.02
RTN3-203ENST00000341307 NXPH4O95158 308 aa8.66□□□□□ -1.02
RTN3-203ENST00000341307 INAFM2P0DMQ5 153 aa8.66□□□□□ -1.02
RTN3-203ENST00000341307 Q8N2B8 174 aa8.66□□□□□ -1.02
RTN3-203ENST00000341307 MXRA5Q9NR99 2828 aa8.66□□□□□ -1.02
RTN3-203ENST00000341307 PPP1R17O96001 155 aa8.65□□□□□ -1.02
RTN3-203ENST00000341307 CIRBPQ14011 172 aaKnown RBP8.65□□□□□ -1.02
RTN3-203ENST00000341307 A6NDX4 124 aa8.65□□□□□ -1.02
RTN3-203ENST00000341307 TRBV12-3P01733 135 aa8.65□□□□□ -1.02
RTN3-203ENST00000341307 DSCR9P59020 149 aa8.65□□□□□ -1.02
RTN3-203ENST00000341307 C19orf54Q5BKX5 351 aa8.65□□□□□ -1.02
RTN3-203ENST00000341307 FAM222AQ5U5X8 452 aa8.65□□□□□ -1.02
RTN3-203ENST00000341307 CLPSL1A2RUU4 121 aa8.64□□□□□ -1.03
RTN3-203ENST00000341307 IGHV3-11P01762 117 aa8.64□□□□□ -1.03
RTN3-203ENST00000341307 LINC00315P59091 139 aa8.64□□□□□ -1.03
RTN3-203ENST00000341307 LINC01356Q8N9X3 169 aa8.64□□□□□ -1.03
RTN3-203ENST00000341307 UBE2D4Q9Y2X8 147 aa8.64□□□□□ -1.03
RTN3-203ENST00000341307 IGHV4-59P01825 116 aa8.64□□□□□ -1.03
RTN3-203ENST00000341307 DEFB112Q30KQ8 113 aa8.64□□□□□ -1.03
RTN3-203ENST00000341307 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.64□□□□□ -1.03
RTN3-203ENST00000341307 LINC00846Q9NV44 126 aa8.64□□□□□ -1.03
RTN3-203ENST00000341307 IGHV4OR15-8A0A075B7B6 117 aa8.63□□□□□ -1.03
RTN3-203ENST00000341307 A0A087WW49 117 aa8.63□□□□□ -1.03
RTN3-203ENST00000341307 LINC00482Q8N8I6 264 aa8.63□□□□□ -1.03
RTN3-203ENST00000341307 BRK1Q8WUW1 75 aa8.63□□□□□ -1.03
RTN3-203ENST00000341307 FAM218AQ96MZ4 157 aa8.63□□□□□ -1.03
RTN3-203ENST00000341307 NF1P21359 2839 aa8.63□□□□□ -1.03
RTN3-203ENST00000341307 IGF1P05019 195 aa8.63□□□□□ -1.03
RTN3-203ENST00000341307 KLK9Q2XQG4 91 aa8.63□□□□□ -1.03
RTN3-203ENST00000341307 NDUFA12Q9UI09 145 aa8.63□□□□□ -1.03
RTN3-203ENST00000341307 KLK9Q9UKQ9 250 aa8.63□□□□□ -1.03
RTN3-203ENST00000341307 KIF25-AS1Q9Y6Z4 181 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms