RNA–Protein interactions for RNA: ENST00000340384.4

TUBB4B-201, Transcript of tubulin beta 4B class IVb, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB4B, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4B-201ENST00000340384 SBSPONQ8IVN8 264 aa10.77□□□□□ -0.68
TUBB4B-201ENST00000340384 MAPKAPK5-AS1Q8N8E1 139 aa10.77□□□□□ -0.68
TUBB4B-201ENST00000340384 TTTY13Q9BZ97 58 aa10.77□□□□□ -0.68
TUBB4B-201ENST00000340384 GTSF1LQ9H1H1 148 aa10.77□□□□□ -0.68
TUBB4B-201ENST00000340384 FBN3Q75N90 2809 aa10.77□□□□□ -0.68
TUBB4B-201ENST00000340384 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.76□□□□□ -0.69
TUBB4B-201ENST00000340384 IGKV2-29A2NJV5 120 aaPredicted RBP10.76□□□□□ -0.69
TUBB4B-201ENST00000340384 GAGE12JA6NER3 117 aa10.76□□□□□ -0.69
TUBB4B-201ENST00000340384 ZNF815PA8K554 130 aa10.76□□□□□ -0.69
TUBB4B-201ENST00000340384 GAGE4Q13068 117 aa10.76□□□□□ -0.69
TUBB4B-201ENST00000340384 GAGE5Q13069 117 aa10.76□□□□□ -0.69
TUBB4B-201ENST00000340384 GAGE13Q4V321 117 aa10.76□□□□□ -0.69
TUBB4B-201ENST00000340384 LINC00612Q8N6U2 182 aa10.76□□□□□ -0.69
TUBB4B-201ENST00000340384 MRAPQ8TCY5 172 aa10.76□□□□□ -0.69
TUBB4B-201ENST00000340384 LYRM9A8MSI8 78 aa10.76□□□□□ -0.69
TUBB4B-201ENST00000340384 X6R8D5 127 aa10.76□□□□□ -0.69
TUBB4B-201ENST00000340384 H7C423 109 aa10.75□□□□□ -0.69
TUBB4B-201ENST00000340384 LGALS3P17931 250 aaKnown RBP10.75□□□□□ -0.69
TUBB4B-201ENST00000340384 PLEKHB2Q96CS7 222 aa10.75□□□□□ -0.69
TUBB4B-201ENST00000340384 CSDC2Q9Y534 153 aaKnown RBP10.75□□□□□ -0.69
TUBB4B-201ENST00000340384 TENM3Q9P273 2699 aa10.74□□□□□ -0.69
TUBB4B-201ENST00000340384 COL7A1Q02388 2944 aa10.74□□□□□ -0.69
TUBB4B-201ENST00000340384 A0A0J9YXV3 536 aa10.74□□□□□ -0.69
TUBB4B-201ENST00000340384 TINCRA0A1B0GVN0 87 aa10.74□□□□□ -0.69
TUBB4B-201ENST00000340384 TMEM223A0PJW6 202 aa10.74□□□□□ -0.69
TUBB4B-201ENST00000340384 H3BRM9 83 aa10.74□□□□□ -0.69
TUBB4B-201ENST00000340384 TAX1BP3O14907 124 aa10.74□□□□□ -0.69
TUBB4B-201ENST00000340384 LEPROTO15243 131 aa10.74□□□□□ -0.69
TUBB4B-201ENST00000340384 ZNF22P17026 224 aaPredicted RBP10.74□□□□□ -0.69
TUBB4B-201ENST00000340384 GCSHP23434 173 aa10.74□□□□□ -0.69
TUBB4B-201ENST00000340384 SCGB1D4Q6XE38 83 aa10.74□□□□□ -0.69
TUBB4B-201ENST00000340384 CEND1Q8N111 149 aa10.74□□□□□ -0.69
TUBB4B-201ENST00000340384 HIST1H4GQ99525 98 aa10.74□□□□□ -0.69
TUBB4B-201ENST00000340384 UBE2L6O14933 153 aa10.73□□□□□ -0.69
TUBB4B-201ENST00000340384 PTTG1IPP53801 180 aa10.73□□□□□ -0.69
TUBB4B-201ENST00000340384 FHL2Q14192 279 aa10.73□□□□□ -0.69
TUBB4B-201ENST00000340384 LINC00469Q8N7U9 141 aa10.73□□□□□ -0.69
TUBB4B-201ENST00000340384 TMEM243Q9BU79 118 aa10.73□□□□□ -0.69
TUBB4B-201ENST00000340384 TM2D2Q9BX73 214 aa10.73□□□□□ -0.69
TUBB4B-201ENST00000340384 J3QQQ9 107 aa10.73□□□□□ -0.69
TUBB4B-201ENST00000340384 DEFB135Q30KP9 77 aa10.73□□□□□ -0.69
TUBB4B-201ENST00000340384 Q6ZUT4 128 aa10.73□□□□□ -0.69
TUBB4B-201ENST00000340384 RETNQ9HD89 108 aa10.73□□□□□ -0.69
TUBB4B-201ENST00000340384 DEFB130BP0DP73 79 aa10.72□□□□□ -0.69
TUBB4B-201ENST00000340384 DEFB130AP0DP74 79 aa10.72□□□□□ -0.69
TUBB4B-201ENST00000340384 CEMP1Q6PRD7 247 aaPredicted RBP10.72□□□□□ -0.69
TUBB4B-201ENST00000340384 TMEM101Q96IK0 257 aa10.72□□□□□ -0.69
TUBB4B-201ENST00000340384 GEMIN7Q9H840 131 aaKnown RBP10.72□□□□□ -0.69
TUBB4B-201ENST00000340384 SMIM13P0DJ93 91 aa10.71□□□□□ -0.69
TUBB4B-201ENST00000340384 MIFP14174 115 aa10.71□□□□□ -0.69
TUBB4B-201ENST00000340384 AMMECR1LQ6DCA0 310 aa10.71□□□□□ -0.69
TUBB4B-201ENST00000340384 OR5A1Q8NGJ0 315 aa10.71□□□□□ -0.69
TUBB4B-201ENST00000340384 FAM104AQ969W3 186 aa10.71□□□□□ -0.69
TUBB4B-201ENST00000340384 RNF183Q96D59 192 aa10.71□□□□□ -0.69
TUBB4B-201ENST00000340384 TIRAPP58753 221 aa10.7□□□□□ -0.7
TUBB4B-201ENST00000340384 TM2D3Q9BRN9 247 aa10.7□□□□□ -0.7
TUBB4B-201ENST00000340384 TMEM238LA0A1B0GVL6 79 aa10.69□□□□□ -0.7
TUBB4B-201ENST00000340384 A6NJY4 79 aa10.69□□□□□ -0.7
TUBB4B-201ENST00000340384 UBE2D1P51668 147 aa10.69□□□□□ -0.7
TUBB4B-201ENST00000340384 NTM-AS1Q6ZSK4 140 aa10.69□□□□□ -0.7
TUBB4B-201ENST00000340384 B9D2Q9BPU9 175 aa10.69□□□□□ -0.7
TUBB4B-201ENST00000340384 VAMP3Q15836 100 aa10.69□□□□□ -0.7
TUBB4B-201ENST00000340384 PRO0255Q9UI72 69 aa10.69□□□□□ -0.7
TUBB4B-201ENST00000340384 C9orf118A6NHY6 69 aa10.68□□□□□ -0.7
TUBB4B-201ENST00000340384 LINC00694P0DN24 101 aa10.68□□□□□ -0.7
TUBB4B-201ENST00000340384 FXYD2P54710 66 aa10.68□□□□□ -0.7
TUBB4B-201ENST00000340384 HERVK_113P63121 156 aa10.68□□□□□ -0.7
TUBB4B-201ENST00000340384 SRSF9Q13242 221 aaKnown RBP eCLIP10.68□□□□□ -0.7
TUBB4B-201ENST00000340384 RNASE13Q5GAN3 156 aaKnown RBP10.68□□□□□ -0.7
TUBB4B-201ENST00000340384 FAM222AQ5U5X8 452 aa10.68□□□□□ -0.7
TUBB4B-201ENST00000340384 FAM19A3Q7Z5A8 133 aa10.68□□□□□ -0.7
TUBB4B-201ENST00000340384 SPANXB1Q9NS25 103 aaPredicted RBP10.68□□□□□ -0.7
TUBB4B-201ENST00000340384 IGHV1-58A0A0C4DH39 117 aa10.67□□□□□ -0.7
TUBB4B-201ENST00000340384 TRBV6-8A0A0A6YYG3 113 aa10.66□□□□□ -0.7
TUBB4B-201ENST00000340384 IGHV4-28A0A0C4DH34 117 aa10.66□□□□□ -0.7
TUBB4B-201ENST00000340384 LOC100131303A0A0U1RQF7 123 aa10.66□□□□□ -0.7
TUBB4B-201ENST00000340384 TEX48A0A1B0GUV7 120 aa10.66□□□□□ -0.7
TUBB4B-201ENST00000340384 UBE2V1Q13404 147 aa10.66□□□□□ -0.7
TUBB4B-201ENST00000340384 IGLV5-45A0A087WSX0 123 aa10.66□□□□□ -0.7
TUBB4B-201ENST00000340384 A0A0J9YY99 117 aa10.66□□□□□ -0.7
TUBB4B-201ENST00000340384 TSPEAR-AS2P59090 65 aa10.66□□□□□ -0.7
TUBB4B-201ENST00000340384 DAD1P61803 113 aa10.66□□□□□ -0.7
TUBB4B-201ENST00000340384 Q6ZVH6 145 aa10.66□□□□□ -0.7
TUBB4B-201ENST00000340384 CDC42SE2Q9NRR3 84 aa10.66□□□□□ -0.7
TUBB4B-201ENST00000340384 IGHV3-30-3P0DP02 117 aa10.65□□□□□ -0.7
TUBB4B-201ENST00000340384 ATP6V0E2Q8NHE4 81 aa10.65□□□□□ -0.7
TUBB4B-201ENST00000340384 NHP2Q9NX24 153 aaKnown RBP10.65□□□□□ -0.7
TUBB4B-201ENST00000340384 SPART-AS1P0CW21 52 aa10.64□□□□□ -0.71
TUBB4B-201ENST00000340384 GYPEP15421 78 aa10.64□□□□□ -0.71
TUBB4B-201ENST00000340384 Q8NAQ8 132 aa10.64□□□□□ -0.71
TUBB4B-201ENST00000340384 IGHV3-64A0A075B6Q5 118 aa10.63□□□□□ -0.71
TUBB4B-201ENST00000340384 TMEM238C9JI98 176 aa10.63□□□□□ -0.71
TUBB4B-201ENST00000340384 PAX4O43316 350 aa10.63□□□□□ -0.71
TUBB4B-201ENST00000340384 VSIG2Q96IQ7 327 aa10.63□□□□□ -0.71
TUBB4B-201ENST00000340384 SPATA25Q9BR10 227 aa10.63□□□□□ -0.71
TUBB4B-201ENST00000340384 ATP5G1P05496 136 aa10.62□□□□□ -0.71
TUBB4B-201ENST00000340384 GTF2H5Q6ZYL4 71 aa10.62□□□□□ -0.71
TUBB4B-201ENST00000340384 RAB37Q96AX2 223 aa10.62□□□□□ -0.71
TUBB4B-201ENST00000340384 CHCHD5Q9BSY4 110 aa10.62□□□□□ -0.71
TUBB4B-201ENST00000340384 H3BUT2 72 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms