RNA–Protein interactions for RNA: ENST00000340342.10

CTSL-201, Transcript of cathepsin L, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSL, Length 1,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSL-201ENST00000340342 URB1-AS1Q96HZ7 61 aa9.49□□□□□ -0.89
CTSL-201ENST00000340342 SMIM2Q9BVW6 85 aa9.49□□□□□ -0.89
CTSL-201ENST00000340342 NXT2Q9NPJ8 142 aaKnown RBP9.49□□□□□ -0.89
CTSL-201ENST00000340342 TRAV8-3A0A0A6YYJ7 113 aa9.48□□□□□ -0.89
CTSL-201ENST00000340342 C5orf52A6NGY3 159 aa9.48□□□□□ -0.89
CTSL-201ENST00000340342 LINC00310P59036 64 aa9.48□□□□□ -0.89
CTSL-201ENST00000340342 ENHOQ6UWT2 76 aa9.48□□□□□ -0.89
CTSL-201ENST00000340342 FA2HQ7L5A8 372 aa9.48□□□□□ -0.89
CTSL-201ENST00000340342 PSCAO43653 123 aa9.48□□□□□ -0.89
CTSL-201ENST00000340342 NUPR1O60356 82 aa9.48□□□□□ -0.89
CTSL-201ENST00000340342 ESDP10768 282 aa9.48□□□□□ -0.89
CTSL-201ENST00000340342 FCER1GP30273 86 aa9.48□□□□□ -0.89
CTSL-201ENST00000340342 RNASEKQ6P5S7 137 aaKnown RBP9.48□□□□□ -0.89
CTSL-201ENST00000340342 LINC00269Q8N2A0 174 aa9.48□□□□□ -0.89
CTSL-201ENST00000340342 C20orf203Q8NBC4 194 aa9.48□□□□□ -0.89
CTSL-201ENST00000340342 CHCHD1Q96BP2 118 aaKnown RBP9.48□□□□□ -0.89
CTSL-201ENST00000340342 A0A1B0GUV1 79 aa9.47□□□□□ -0.89
CTSL-201ENST00000340342 EREGO14944 169 aa9.47□□□□□ -0.89
CTSL-201ENST00000340342 CRPP02741 224 aa9.47□□□□□ -0.89
CTSL-201ENST00000340342 KIR2DL4Q99706 377 aa9.47□□□□□ -0.89
CTSL-201ENST00000340342 IGKV2D-24A0A075B6R9 120 aa9.46□□□□□ -0.9
CTSL-201ENST00000340342 LINC01546A6NGU7 62 aa9.46□□□□□ -0.9
CTSL-201ENST00000340342 HSBP1O75506 76 aa9.46□□□□□ -0.9
CTSL-201ENST00000340342 FGF6P10767 208 aa9.46□□□□□ -0.9
CTSL-201ENST00000340342 AMMECR1LQ6DCA0 310 aa9.46□□□□□ -0.9
CTSL-201ENST00000340342 SPATA12Q7Z6I5 190 aa9.46□□□□□ -0.9
CTSL-201ENST00000340342 AP5S1Q9NUS5 200 aa9.46□□□□□ -0.9
CTSL-201ENST00000340342 PRR34Q9NV39 138 aa9.46□□□□□ -0.9
CTSL-201ENST00000340342 C16orf90A8MZG2 172 aa9.45□□□□□ -0.9
CTSL-201ENST00000340342 K7EMI3 77 aa9.45□□□□□ -0.9
CTSL-201ENST00000340342 TCAPO15273 167 aa9.45□□□□□ -0.9
CTSL-201ENST00000340342 HIST3H2BBQ8N257 126 aa9.45□□□□□ -0.9
CTSL-201ENST00000340342 MAPKAPK5-AS1Q8N8E1 139 aa9.45□□□□□ -0.9
CTSL-201ENST00000340342 PGPEP1Q9NXJ5 209 aa9.45□□□□□ -0.9
CTSL-201ENST00000340342 LRP1BQ9NZR2 4599 aa9.45□□□□□ -0.9
CTSL-201ENST00000340342 A0A087WTM6 91 aa9.44□□□□□ -0.9
CTSL-201ENST00000340342 H7C423 109 aa9.44□□□□□ -0.9
CTSL-201ENST00000340342 FUSP35637 526 aaKnown RBP eCLIP9.44□□□□□ -0.9
CTSL-201ENST00000340342 REG3AQ06141 175 aa9.44□□□□□ -0.9
CTSL-201ENST00000340342 PDZD11Q5EBL8 140 aa9.44□□□□□ -0.9
CTSL-201ENST00000340342 TM2D2Q9BX73 214 aa9.44□□□□□ -0.9
CTSL-201ENST00000340342 KIAA1109Q2LD37 5005 aa9.44□□□□□ -0.9
CTSL-201ENST00000340342 LRCOL1A6NCL2 159 aa9.43□□□□□ -0.9
CTSL-201ENST00000340342 S100A2P29034 98 aa9.43□□□□□ -0.9
CTSL-201ENST00000340342 KRTAP10-2P60368 255 aa9.43□□□□□ -0.9
CTSL-201ENST00000340342 WFDC2Q14508 124 aa9.43□□□□□ -0.9
CTSL-201ENST00000340342 RMI2Q96E14 147 aa9.43□□□□□ -0.9
CTSL-201ENST00000340342 C1orf43Q9BWL3 253 aa9.43□□□□□ -0.9
CTSL-201ENST00000340342 IGLV10-54A0A075B6I4 117 aa9.42□□□□□ -0.9
CTSL-201ENST00000340342 IGKV3OR2-268A0A0C4DH90 116 aa9.42□□□□□ -0.9
CTSL-201ENST00000340342 LECT2O14960 151 aa9.42□□□□□ -0.9
CTSL-201ENST00000340342 MIAQ16674 131 aa9.42□□□□□ -0.9
CTSL-201ENST00000340342 ORMDL2Q53FV1 153 aa9.42□□□□□ -0.9
CTSL-201ENST00000340342 FAM19A2Q8N3H0 131 aa9.42□□□□□ -0.9
CTSL-201ENST00000340342 TMEM18Q96B42 140 aa9.42□□□□□ -0.9
CTSL-201ENST00000340342 ZNF25P17030 456 aaPredicted RBP9.41□□□□□ -0.9
CTSL-201ENST00000340342 RPL39P62891 51 aaKnown RBP9.41□□□□□ -0.9
CTSL-201ENST00000340342 BAALCQ8WXS3 180 aa9.41□□□□□ -0.9
CTSL-201ENST00000340342 PMCHL1Q16048 86 aa9.4□□□□□ -0.9
CTSL-201ENST00000340342 CDPF1Q6NVV7 123 aa9.4□□□□□ -0.9
CTSL-201ENST00000340342 MRPL52Q86TS9 123 aaKnown RBP9.4□□□□□ -0.9
CTSL-201ENST00000340342 OR5A1Q8NGJ0 315 aa9.4□□□□□ -0.9
CTSL-201ENST00000340342 TMEM101Q96IK0 257 aa9.4□□□□□ -0.9
CTSL-201ENST00000340342 UBE2D4Q9Y2X8 147 aa9.4□□□□□ -0.9
CTSL-201ENST00000340342 COX11Q9Y6N1 276 aa9.4□□□□□ -0.9
CTSL-201ENST00000340342 HBDP02042 147 aa9.39□□□□□ -0.91
CTSL-201ENST00000340342 G0S2P27469 103 aa9.39□□□□□ -0.91
CTSL-201ENST00000340342 KRTAP26-1Q6PEX3 210 aa9.39□□□□□ -0.91
CTSL-201ENST00000340342 PACRGQ96M98 296 aaPredicted RBP9.39□□□□□ -0.91
CTSL-201ENST00000340342 HIST1H2BLQ99880 126 aa9.39□□□□□ -0.91
CTSL-201ENST00000340342 A0A096LNJ9 63 aa9.39□□□□□ -0.91
CTSL-201ENST00000340342 RNASE13Q5GAN3 156 aaKnown RBP9.39□□□□□ -0.91
CTSL-201ENST00000340342 CDC42SE2Q9NRR3 84 aa9.39□□□□□ -0.91
CTSL-201ENST00000340342 IFITM10A6NMD0 228 aa9.38□□□□□ -0.91
CTSL-201ENST00000340342 FABP4P15090 132 aa9.38□□□□□ -0.91
CTSL-201ENST00000340342 DGAT2L7PQ6IED9 249 aa9.38□□□□□ -0.91
CTSL-201ENST00000340342 TRAV8-4A0A0B4J246 113 aa9.37□□□□□ -0.91
CTSL-201ENST00000340342 LOC105371267A0A1B0GV96 52 aa9.37□□□□□ -0.91
CTSL-201ENST00000340342 CDK2AP2O75956 126 aa9.37□□□□□ -0.91
CTSL-201ENST00000340342 LEPROTL1O95214 131 aa9.37□□□□□ -0.91
CTSL-201ENST00000340342 Q6ZUT4 128 aa9.37□□□□□ -0.91
CTSL-201ENST00000340342 ZNF664Q8N3J9 261 aa9.37□□□□□ -0.91
CTSL-201ENST00000340342 Q8N814 137 aa9.37□□□□□ -0.91
CTSL-201ENST00000340342 APOBP04114 4563 aaKnown RBP9.36□□□□□ -0.91
CTSL-201ENST00000340342 LINC01549A6NIU2 74 aa9.36□□□□□ -0.91
CTSL-201ENST00000340342 C2orf66Q6UXQ4 117 aa9.36□□□□□ -0.91
CTSL-201ENST00000340342 FAM104AQ969W3 186 aa9.36□□□□□ -0.91
CTSL-201ENST00000340342 OPRPNQ99935 248 aaPredicted RBP9.36□□□□□ -0.91
CTSL-201ENST00000340342 CYSLTR1Q9Y271 337 aa9.36□□□□□ -0.91
CTSL-201ENST00000340342 CSDC2Q9Y534 153 aaKnown RBP9.36□□□□□ -0.91
CTSL-201ENST00000340342 HERC2O95714 4834 aa9.36□□□□□ -0.91
CTSL-201ENST00000340342 RYR1P21817 5038 aa9.36□□□□□ -0.91
CTSL-201ENST00000340342 SMAGPQ0VAQ4 97 aa9.35□□□□□ -0.91
CTSL-201ENST00000340342 TOMM6Q96B49 74 aa9.35□□□□□ -0.91
CTSL-201ENST00000340342 TIMM21Q9BVV7 248 aa9.35□□□□□ -0.91
CTSL-201ENST00000340342 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.34□□□□□ -0.91
CTSL-201ENST00000340342 LINC00959A0A1B0GUT2 108 aa9.34□□□□□ -0.91
CTSL-201ENST00000340342 GAGE12HA6NDE8 117 aa9.34□□□□□ -0.91
CTSL-201ENST00000340342 USP17L23D6RBM5 183 aa9.34□□□□□ -0.91
CTSL-201ENST00000340342 NTN5Q8WTR8 489 aaPredicted RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms