RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 IGKV2-28A0A075B6P5 120 aa7.3□□□□□ -1.24
COL4A6-201ENST00000334504 IGKV2D-28P01615 120 aa7.3□□□□□ -1.24
COL4A6-201ENST00000334504 SHISA2Q6UWI4 295 aa7.3□□□□□ -1.24
COL4A6-201ENST00000334504 MUC6Q6W4X9 2439 aa7.3□□□□□ -1.24
COL4A6-201ENST00000334504 CREBBPQ92793 2442 aa7.3□□□□□ -1.24
COL4A6-201ENST00000334504 TSHBP01222 138 aa7.3□□□□□ -1.24
COL4A6-201ENST00000334504 NOTCH3Q9UM47 2321 aa7.3□□□□□ -1.24
COL4A6-201ENST00000334504 CRIP2P52943 208 aaPredicted RBP7.3□□□□□ -1.24
COL4A6-201ENST00000334504 PRYO14603 147 aa7.29□□□□□ -1.24
COL4A6-201ENST00000334504 C1orf229Q6ZS94 237 aaPredicted RBP7.29□□□□□ -1.24
COL4A6-201ENST00000334504 PYGO1Q9Y3Y4 419 aa7.29□□□□□ -1.24
COL4A6-201ENST00000334504 LINC01548A6NM66 108 aa7.29□□□□□ -1.24
COL4A6-201ENST00000334504 MYCNOSP40205 109 aa7.29□□□□□ -1.24
COL4A6-201ENST00000334504 UBE2D1P51668 147 aa7.29□□□□□ -1.24
COL4A6-201ENST00000334504 IGLV2-11P01706 119 aa7.28□□□□□ -1.24
COL4A6-201ENST00000334504 SPINK6Q6UWN8 80 aa7.28□□□□□ -1.24
COL4A6-201ENST00000334504 TRBV6-8A0A0A6YYG3 113 aa7.28□□□□□ -1.24
COL4A6-201ENST00000334504 DSCAML1Q8TD84 2053 aa7.28□□□□□ -1.24
COL4A6-201ENST00000334504 C11orf45Q8TAV5 145 aa7.28□□□□□ -1.24
COL4A6-201ENST00000334504 ZNF407Q9C0G0 2248 aa7.28□□□□□ -1.24
COL4A6-201ENST00000334504 UBE2D4Q9Y2X8 147 aa7.28□□□□□ -1.24
COL4A6-201ENST00000334504 KIR2DL5BQ8NHK3 375 aa7.28□□□□□ -1.24
COL4A6-201ENST00000334504 A6NDX4 124 aa7.27□□□□□ -1.24
COL4A6-201ENST00000334504 PRO0628Q9UI54 55 aa7.27□□□□□ -1.24
COL4A6-201ENST00000334504 C14orf177Q52M58 125 aa7.27□□□□□ -1.25
COL4A6-201ENST00000334504 ZGRF1Q86YA3 2104 aa7.27□□□□□ -1.25
COL4A6-201ENST00000334504 GAS8-AS1O95177 125 aa7.27□□□□□ -1.25
COL4A6-201ENST00000334504 CRYGDP07320 174 aa7.27□□□□□ -1.25
COL4A6-201ENST00000334504 ADAMTS9Q9P2N4 1935 aa7.27□□□□□ -1.25
COL4A6-201ENST00000334504 EIF4EBP1Q13541 118 aaPredicted RBP7.27□□□□□ -1.25
COL4A6-201ENST00000334504 DHRS4-AS1Q9P1J3 65 aa7.27□□□□□ -1.25
COL4A6-201ENST00000334504 M0R378 163 aa7.26□□□□□ -1.25
COL4A6-201ENST00000334504 MSMPQ1L6U9 139 aa7.26□□□□□ -1.25
COL4A6-201ENST00000334504 ZFHX2Q9C0A1 2572 aaPredicted RBP7.26□□□□□ -1.25
COL4A6-201ENST00000334504 LINC00310P59036 64 aa7.26□□□□□ -1.25
COL4A6-201ENST00000334504 IL17DQ8TAD2 202 aa7.26□□□□□ -1.25
COL4A6-201ENST00000334504 LINC00208Q96KT6 92 aa7.26□□□□□ -1.25
COL4A6-201ENST00000334504 K7EQG2 157 aa7.26□□□□□ -1.25
COL4A6-201ENST00000334504 DNAJC9-AS1A6NH13 148 aa7.25□□□□□ -1.25
COL4A6-201ENST00000334504 BEAN1Q3B7T3 259 aa7.25□□□□□ -1.25
COL4A6-201ENST00000334504 NTM-AS1Q6ZSK4 140 aa7.25□□□□□ -1.25
COL4A6-201ENST00000334504 PTPRQQ9UMZ3 2332 aa7.25□□□□□ -1.25
COL4A6-201ENST00000334504 Q6ZSV7 163 aa7.24□□□□□ -1.25
COL4A6-201ENST00000334504 FAM208BQ5VWN6 2430 aa7.24□□□□□ -1.25
COL4A6-201ENST00000334504 SYCNQ0VAF6 134 aa7.24□□□□□ -1.25
COL4A6-201ENST00000334504 NUP210Q8TEM1 1887 aaPredicted RBP7.24□□□□□ -1.25
COL4A6-201ENST00000334504 TRBV7-7A0A0K0K1E9 115 aa7.24□□□□□ -1.25
COL4A6-201ENST00000334504 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.24□□□□□ -1.25
COL4A6-201ENST00000334504 RPL37AP8A6NKH3 93 aa7.24□□□□□ -1.25
COL4A6-201ENST00000334504 LY6LH3BQJ8 138 aa7.24□□□□□ -1.25
COL4A6-201ENST00000334504 ODF3BA8MYP8 253 aa7.23□□□□□ -1.25
COL4A6-201ENST00000334504 PCNX2A6NKB5 2137 aa7.23□□□□□ -1.25
COL4A6-201ENST00000334504 ZNF73O43830 326 aaPredicted RBP7.23□□□□□ -1.25
COL4A6-201ENST00000334504 CRIP3Q6Q6R5 217 aa7.23□□□□□ -1.25
COL4A6-201ENST00000334504 RNASE3P12724 160 aaKnown RBP7.23□□□□□ -1.25
COL4A6-201ENST00000334504 A0A087WYN8 130 aa7.23□□□□□ -1.25
COL4A6-201ENST00000334504 C11orf21Q9P2W6 132 aa7.23□□□□□ -1.25
COL4A6-201ENST00000334504 TRBV7-6A0A0J9YX20 115 aa7.23□□□□□ -1.25
COL4A6-201ENST00000334504 PRR9Q5T870 116 aa7.23□□□□□ -1.25
COL4A6-201ENST00000334504 IGFL2Q6UWQ7 119 aa7.23□□□□□ -1.25
COL4A6-201ENST00000334504 ATRXP46100 2492 aa7.22□□□□□ -1.25
COL4A6-201ENST00000334504 TRBV6-4A0A1B0GX49 114 aa7.22□□□□□ -1.25
COL4A6-201ENST00000334504 URB1-AS1Q96HZ7 61 aa7.22□□□□□ -1.25
COL4A6-201ENST00000334504 PLCE1Q9P212 2302 aa7.22□□□□□ -1.25
COL4A6-201ENST00000334504 BDP1A6H8Y1 2624 aa7.22□□□□□ -1.25
COL4A6-201ENST00000334504 LINC00959A0A1B0GUT2 108 aa7.22□□□□□ -1.25
COL4A6-201ENST00000334504 CD164L2Q6UWJ8 174 aa7.22□□□□□ -1.25
COL4A6-201ENST00000334504 LINC00574Q9H8X3 128 aa7.22□□□□□ -1.25
COL4A6-201ENST00000334504 LOC100131303A0A0U1RQF7 123 aa7.21□□□□□ -1.25
COL4A6-201ENST00000334504 UBE2D3P61077 147 aa7.21□□□□□ -1.25
COL4A6-201ENST00000334504 UBE2D2P62837 147 aa7.21□□□□□ -1.25
COL4A6-201ENST00000334504 ADORA2A-AS1P86434 159 aa7.21□□□□□ -1.25
COL4A6-201ENST00000334504 Q8N814 137 aa7.21□□□□□ -1.25
COL4A6-201ENST00000334504 IGLV9-49A0A0B4J1Y8 123 aa7.21□□□□□ -1.26
COL4A6-201ENST00000334504 POLR2KP53803 58 aaKnown RBP7.21□□□□□ -1.26
COL4A6-201ENST00000334504 Q8N3U1 123 aa7.21□□□□□ -1.26
COL4A6-201ENST00000334504 ZNF843Q8N446 348 aa7.21□□□□□ -1.26
COL4A6-201ENST00000334504 DEFB114Q30KQ6 69 aa7.21□□□□□ -1.26
COL4A6-201ENST00000334504 ESRGQ1W209 222 aa7.2□□□□□ -1.26
COL4A6-201ENST00000334504 HILS1P60008 231 aa7.2□□□□□ -1.26
COL4A6-201ENST00000334504 COX17Q14061 63 aa7.2□□□□□ -1.26
COL4A6-201ENST00000334504 ANAPC1Q9H1A4 1944 aa7.2□□□□□ -1.26
COL4A6-201ENST00000334504 PCOTHQ58A44 107 aa7.2□□□□□ -1.26
COL4A6-201ENST00000334504 BBC3Q96PG8 261 aaPredicted RBP7.2□□□□□ -1.26
COL4A6-201ENST00000334504 CDIP1Q9H305 208 aa7.2□□□□□ -1.26
COL4A6-201ENST00000334504 PRORYQ9H606 182 aa7.19□□□□□ -1.26
COL4A6-201ENST00000334504 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.19□□□□□ -1.26
COL4A6-201ENST00000334504 LY6G6DO95868 133 aa7.19□□□□□ -1.26
COL4A6-201ENST00000334504 Q6ZVQ6 151 aa7.19□□□□□ -1.26
COL4A6-201ENST00000334504 IGIPA6NJ69 53 aa7.19□□□□□ -1.26
COL4A6-201ENST00000334504 LINC00482Q8N8I6 264 aa7.19□□□□□ -1.26
COL4A6-201ENST00000334504 COL4A3Q01955 1670 aa7.19□□□□□ -1.26
COL4A6-201ENST00000334504 TSPEAR-AS2P59090 65 aa7.19□□□□□ -1.26
COL4A6-201ENST00000334504 SHANK1Q9Y566 2161 aa7.19□□□□□ -1.26
COL4A6-201ENST00000334504 IGLV4-69A0A075B6H9 119 aa7.19□□□□□ -1.26
COL4A6-201ENST00000334504 CRYGAP11844 174 aa7.18□□□□□ -1.26
COL4A6-201ENST00000334504 C4orf26Q17RF5 130 aa7.18□□□□□ -1.26
COL4A6-201ENST00000334504 SERTAD4-AS1Q5TG53 156 aa7.18□□□□□ -1.26
COL4A6-201ENST00000334504 MALRD1Q5VYJ5 2156 aa7.18□□□□□ -1.26
COL4A6-201ENST00000334504 DEFB131BA0A096LNP1 70 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms