RNA–Protein interactions for RNA: ENST00000334348.7

UPK3B-202, Transcript of uroplakin 3B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UPK3B, Length 2,373 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-202ENST00000334348 CDKN2A-AS1Q9UH64 79 aa11.83□□□□□ -0.52
UPK3B-202ENST00000334348 IGLV5-45A0A087WSX0 123 aa11.82□□□□□ -0.52
UPK3B-202ENST00000334348 SDIM1Q6ZPB5 146 aa11.82□□□□□ -0.52
UPK3B-202ENST00000334348 C3orf22Q8N5N4 141 aa11.82□□□□□ -0.52
UPK3B-202ENST00000334348 VPREB3Q9UKI3 123 aa11.82□□□□□ -0.52
UPK3B-202ENST00000334348 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.82□□□□□ -0.52
UPK3B-202ENST00000334348 IGKV2-29A2NJV5 120 aaPredicted RBP11.82□□□□□ -0.52
UPK3B-202ENST00000334348 NOTCH2Q04721 2471 aa11.81□□□□□ -0.52
UPK3B-202ENST00000334348 ZNF469Q96JG9 3925 aaPredicted RBP11.81□□□□□ -0.52
UPK3B-202ENST00000334348 ATP5G1P05496 136 aa11.81□□□□□ -0.52
UPK3B-202ENST00000334348 LINC00467Q9BRT7 94 aa11.81□□□□□ -0.52
UPK3B-202ENST00000334348 Q9UF83 564 aa11.8□□□□□ -0.52
UPK3B-202ENST00000334348 CELSR1Q9NYQ6 3014 aa11.8□□□□□ -0.52
UPK3B-202ENST00000334348 UQCRQO14949 82 aa11.79□□□□□ -0.52
UPK3B-202ENST00000334348 TRACP01848 142 aa11.79□□□□□ -0.52
UPK3B-202ENST00000334348 RBMY1A1P0DJD3 496 aaKnown RBP11.79□□□□□ -0.52
UPK3B-202ENST00000334348 RBMY1CP0DJD4 496 aa11.79□□□□□ -0.52
UPK3B-202ENST00000334348 IGHV4-38-2P0DP08 117 aa11.79□□□□□ -0.52
UPK3B-202ENST00000334348 DAZ2Q13117 558 aaKnown RBP11.79□□□□□ -0.52
UPK3B-202ENST00000334348 RBMY1FQ15415 496 aaKnown RBP11.79□□□□□ -0.52
UPK3B-202ENST00000334348 C9orf153Q5TBE3 101 aa11.79□□□□□ -0.52
UPK3B-202ENST00000334348 DAZ4Q86SG3 579 aaKnown RBP11.79□□□□□ -0.52
UPK3B-202ENST00000334348 DAZ3Q9NR90 486 aaKnown RBP11.79□□□□□ -0.52
UPK3B-202ENST00000334348 BEAN1Q3B7T3 259 aa11.79□□□□□ -0.52
UPK3B-202ENST00000334348 COPS9Q8WXC6 57 aa11.79□□□□□ -0.52
UPK3B-202ENST00000334348 NDUFA7O95182 113 aa11.78□□□□□ -0.52
UPK3B-202ENST00000334348 PEMTQ9UBM1 199 aa11.78□□□□□ -0.52
UPK3B-202ENST00000334348 IGLV5-39A0A0G2JS06 123 aa11.78□□□□□ -0.52
UPK3B-202ENST00000334348 CXCL5P42830 114 aa11.78□□□□□ -0.52
UPK3B-202ENST00000334348 PIK3CD-AS1Q5SR53 167 aa11.78□□□□□ -0.52
UPK3B-202ENST00000334348 Q6ZSN1 163 aa11.78□□□□□ -0.52
UPK3B-202ENST00000334348 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.78□□□□□ -0.52
UPK3B-202ENST00000334348 PPDPFQ9H3Y8 114 aa11.78□□□□□ -0.52
UPK3B-202ENST00000334348 Q9H8V8 135 aa11.78□□□□□ -0.52
UPK3B-202ENST00000334348 PSMB8P28062 276 aa11.77□□□□□ -0.52
UPK3B-202ENST00000334348 C5orf38Q86SI9 138 aa11.77□□□□□ -0.52
UPK3B-202ENST00000334348 LINC00526Q96FQ7 95 aa11.77□□□□□ -0.52
UPK3B-202ENST00000334348 KNCNA6PVL3 124 aa11.77□□□□□ -0.53
UPK3B-202ENST00000334348 BAALC-AS2P0C853 105 aa11.77□□□□□ -0.53
UPK3B-202ENST00000334348 HTN1P15515 57 aa11.77□□□□□ -0.53
UPK3B-202ENST00000334348 Q8N2B8 174 aa11.77□□□□□ -0.53
UPK3B-202ENST00000334348 TMEM95Q3KNT9 176 aa11.76□□□□□ -0.53
UPK3B-202ENST00000334348 DNAJC30Q96LL9 226 aa11.76□□□□□ -0.53
UPK3B-202ENST00000334348 AKAP9Q99996 3911 aa11.76□□□□□ -0.53
UPK3B-202ENST00000334348 SOSTDC1Q6X4U4 206 aa11.76□□□□□ -0.53
UPK3B-202ENST00000334348 LINC00694P0DN24 101 aa11.75□□□□□ -0.53
UPK3B-202ENST00000334348 COX6A2Q02221 97 aa11.75□□□□□ -0.53
UPK3B-202ENST00000334348 FAM222AQ5U5X8 452 aa11.75□□□□□ -0.53
UPK3B-202ENST00000334348 C22orf24Q9Y442 160 aa11.75□□□□□ -0.53
UPK3B-202ENST00000334348 ZFHX3Q15911 3703 aa11.75□□□□□ -0.53
UPK3B-202ENST00000334348 HERVK_113P63121 156 aa11.75□□□□□ -0.53
UPK3B-202ENST00000334348 NRGNQ92686 78 aa11.75□□□□□ -0.53
UPK3B-202ENST00000334348 PDZD2O15018 2839 aa11.74□□□□□ -0.53
UPK3B-202ENST00000334348 CCDC168Q8NDH2 2452 aa11.74□□□□□ -0.53
UPK3B-202ENST00000334348 IGHV3-38A0A0C4DH36 116 aa11.74□□□□□ -0.53
UPK3B-202ENST00000334348 ZNF625Q96I27 306 aaPredicted RBP11.74□□□□□ -0.53
UPK3B-202ENST00000334348 TEX15Q9BXT5 2789 aa11.73□□□□□ -0.53
UPK3B-202ENST00000334348 IGHV3OR16-12A0A075B7B8 117 aa11.73□□□□□ -0.53
UPK3B-202ENST00000334348 A0A0U1RRA0 63 aa11.73□□□□□ -0.53
UPK3B-202ENST00000334348 INAFM2P0DMQ5 153 aa11.73□□□□□ -0.53
UPK3B-202ENST00000334348 DGAT2L7PQ6IED9 249 aa11.73□□□□□ -0.53
UPK3B-202ENST00000334348 NAV2Q8IVL1 2488 aa11.73□□□□□ -0.53
UPK3B-202ENST00000334348 ANKRD17O75179 2603 aaKnown RBP11.73□□□□□ -0.53
UPK3B-202ENST00000334348 IGHV3-53P01767 116 aa11.72□□□□□ -0.53
UPK3B-202ENST00000334348 KRTAP10-9P60411 292 aa11.72□□□□□ -0.53
UPK3B-202ENST00000334348 LINC00242Q5T6M2 205 aa11.72□□□□□ -0.53
UPK3B-202ENST00000334348 ZNF415Q09FC8 603 aa11.72□□□□□ -0.53
UPK3B-202ENST00000334348 IGHV4-61A0A0C4DH41 118 aa11.71□□□□□ -0.53
UPK3B-202ENST00000334348 COX7CP15954 63 aa11.71□□□□□ -0.53
UPK3B-202ENST00000334348 FAM19A3Q7Z5A8 133 aa11.71□□□□□ -0.53
UPK3B-202ENST00000334348 FAM218AQ96MZ4 157 aa11.71□□□□□ -0.53
UPK3B-202ENST00000334348 SMIM1B2RUZ4 78 aa11.71□□□□□ -0.54
UPK3B-202ENST00000334348 SYNJ2BPP57105 145 aa11.71□□□□□ -0.54
UPK3B-202ENST00000334348 PRM2P04554 102 aa11.7□□□□□ -0.54
UPK3B-202ENST00000334348 ZANQ9Y493 2812 aa11.7□□□□□ -0.54
UPK3B-202ENST00000334348 TMEM89A2RUT3 159 aa11.7□□□□□ -0.54
UPK3B-202ENST00000334348 A8MTW9 85 aa11.7□□□□□ -0.54
UPK3B-202ENST00000334348 HIST1H4AP62805 103 aaKnown RBP11.69□□□□□ -0.54
UPK3B-202ENST00000334348 C10orf99Q6UWK7 81 aa11.69□□□□□ -0.54
UPK3B-202ENST00000334348 C2orf48Q96LS8 159 aa11.69□□□□□ -0.54
UPK3B-202ENST00000334348 GAGE2AQ6NT46 116 aa11.69□□□□□ -0.54
UPK3B-202ENST00000334348 PRIMA1Q86XR5 153 aa11.69□□□□□ -0.54
UPK3B-202ENST00000334348 HIST2H2BDQ6DRA6 164 aa11.68□□□□□ -0.54
UPK3B-202ENST00000334348 PIMREGQ9BSJ6 248 aa11.68□□□□□ -0.54
UPK3B-202ENST00000334348 ABCA2Q9BZC7 2435 aa11.68□□□□□ -0.54
UPK3B-202ENST00000334348 A0A1B0GX51 115 aa11.68□□□□□ -0.54
UPK3B-202ENST00000334348 CRYGAP11844 174 aa11.68□□□□□ -0.54
UPK3B-202ENST00000334348 MALP21145 153 aa11.68□□□□□ -0.54
UPK3B-202ENST00000334348 LRRC75A-AS1Q8N1F1 130 aa11.68□□□□□ -0.54
UPK3B-202ENST00000334348 RBMY1BA6NDE4 496 aaKnown RBP11.67□□□□□ -0.54
UPK3B-202ENST00000334348 RBMY1EA6NEQ0 496 aaKnown RBP11.67□□□□□ -0.54
UPK3B-202ENST00000334348 PF4P02776 101 aa11.67□□□□□ -0.54
UPK3B-202ENST00000334348 RBMY1DP0C7P1 496 aaKnown RBP11.67□□□□□ -0.54
UPK3B-202ENST00000334348 RPL28P46779 137 aaKnown RBP11.67□□□□□ -0.54
UPK3B-202ENST00000334348 NACAE9PAV3 2078 aa11.66□□□□□ -0.54
UPK3B-202ENST00000334348 ATOX1O00244 68 aa11.66□□□□□ -0.54
UPK3B-202ENST00000334348 RS1O15537 224 aa11.66□□□□□ -0.54
UPK3B-202ENST00000334348 DEFB131AP59861 70 aa11.66□□□□□ -0.54
UPK3B-202ENST00000334348 C11orf72Q8NBR9 251 aa11.66□□□□□ -0.54
UPK3B-202ENST00000334348 TRAV13-2A0A0B4J235 113 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms