RNA–Protein interactions for RNA: ENST00000326470.9

SSH1-201, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SSH1, Length 2,432 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-201ENST00000326470 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.11□□□□□ -0.47
SSH1-201ENST00000326470 IGHV3-38A0A0C4DH36 116 aa12.11□□□□□ -0.47
SSH1-201ENST00000326470 RBMY1BA6NDE4 496 aaKnown RBP12.11□□□□□ -0.47
SSH1-201ENST00000326470 RBMY1EA6NEQ0 496 aaKnown RBP12.11□□□□□ -0.47
SSH1-201ENST00000326470 RBMY1DP0C7P1 496 aaKnown RBP12.11□□□□□ -0.47
SSH1-201ENST00000326470 LINC00308Q8TCZ7 52 aa12.11□□□□□ -0.47
SSH1-201ENST00000326470 TRBV7-7A0A0K0K1E9 115 aa12.1□□□□□ -0.47
SSH1-201ENST00000326470 UBR5O95071 2799 aaPredicted RBP12.1□□□□□ -0.47
SSH1-201ENST00000326470 CELSR2Q9HCU4 2923 aa12.09□□□□□ -0.47
SSH1-201ENST00000326470 KMT2BQ9UMN6 2715 aaPredicted RBP12.09□□□□□ -0.47
SSH1-201ENST00000326470 IGLV5-39A0A0G2JS06 123 aa12.09□□□□□ -0.47
SSH1-201ENST00000326470 COX6A2Q02221 97 aa12.09□□□□□ -0.47
SSH1-201ENST00000326470 UBE2E2Q96LR5 201 aa12.09□□□□□ -0.47
SSH1-201ENST00000326470 CSPG4Q6UVK1 2322 aa12.09□□□□□ -0.47
SSH1-201ENST00000326470 COX7A2LO14548 114 aa12.08□□□□□ -0.48
SSH1-201ENST00000326470 Q9H8V8 135 aa12.08□□□□□ -0.48
SSH1-201ENST00000326470 ACYP1P07311 99 aa12.08□□□□□ -0.48
SSH1-201ENST00000326470 DGAT2L7PQ6IED9 249 aa12.08□□□□□ -0.48
SSH1-201ENST00000326470 C11orf72Q8NBR9 251 aa12.08□□□□□ -0.48
SSH1-201ENST00000326470 IGHV3OR16-12A0A075B7B8 117 aa12.07□□□□□ -0.48
SSH1-201ENST00000326470 HERVK_113P63121 156 aa12.07□□□□□ -0.48
SSH1-201ENST00000326470 BEAN1Q3B7T3 259 aa12.07□□□□□ -0.48
SSH1-201ENST00000326470 CREBBPQ92793 2442 aa12.07□□□□□ -0.48
SSH1-201ENST00000326470 TENM4Q6N022 2769 aa12.06□□□□□ -0.48
SSH1-201ENST00000326470 SHISA2Q6UWI4 295 aa12.06□□□□□ -0.48
SSH1-201ENST00000326470 RS1O15537 224 aa12.06□□□□□ -0.48
SSH1-201ENST00000326470 LINC00242Q5T6M2 205 aa12.06□□□□□ -0.48
SSH1-201ENST00000326470 COPS9Q8WXC6 57 aa12.06□□□□□ -0.48
SSH1-201ENST00000326470 LINC01587Q99440 93 aa12.05□□□□□ -0.48
SSH1-201ENST00000326470 CHCHD5Q9BSY4 110 aa12.05□□□□□ -0.48
SSH1-201ENST00000326470 MEIG1Q5JSS6 88 aa12.04□□□□□ -0.48
SSH1-201ENST00000326470 SOSTDC1Q6X4U4 206 aa12.04□□□□□ -0.48
SSH1-201ENST00000326470 FAM19A3Q7Z5A8 133 aa12.04□□□□□ -0.48
SSH1-201ENST00000326470 ZNF625Q96I27 306 aaPredicted RBP12.04□□□□□ -0.48
SSH1-201ENST00000326470 IMUPQ9GZP8 106 aa12.04□□□□□ -0.48
SSH1-201ENST00000326470 POLQO75417 2590 aa12.03□□□□□ -0.48
SSH1-201ENST00000326470 A0A0U1RRA0 63 aa12.03□□□□□ -0.48
SSH1-201ENST00000326470 SLURP1P55000 103 aa12.03□□□□□ -0.48
SSH1-201ENST00000326470 Q8N2B8 174 aa12.03□□□□□ -0.48
SSH1-201ENST00000326470 HELZ2Q9BYK8 2649 aaKnown RBP12.03□□□□□ -0.48
SSH1-201ENST00000326470 SMIM1B2RUZ4 78 aa12.02□□□□□ -0.48
SSH1-201ENST00000326470 USP9YO00507 2555 aaPredicted RBP12.02□□□□□ -0.48
SSH1-201ENST00000326470 CFAP161Q6P656 301 aa12.02□□□□□ -0.49
SSH1-201ENST00000326470 ZNF702PQ9H963 129 aa12.02□□□□□ -0.49
SSH1-201ENST00000326470 NBPF19A0A087WUL8 3843 aa12.01□□□□□ -0.49
SSH1-201ENST00000326470 TRACP01848 142 aa12.01□□□□□ -0.49
SSH1-201ENST00000326470 VPREB3Q9UKI3 123 aa12.01□□□□□ -0.49
SSH1-201ENST00000326470 ZNF843Q8N446 348 aa12.01□□□□□ -0.49
SSH1-201ENST00000326470 DEFB136Q30KP8 78 aa12□□□□□ -0.49
SSH1-201ENST00000326470 MAP6D1Q9H9H5 199 aa12□□□□□ -0.49
SSH1-201ENST00000326470 INSP01308 110 aa12□□□□□ -0.49
SSH1-201ENST00000326470 LINC00694P0DN24 101 aa12□□□□□ -0.49
SSH1-201ENST00000326470 DSCR9P59020 149 aa12□□□□□ -0.49
SSH1-201ENST00000326470 CSDC2Q9Y534 153 aaKnown RBP12□□□□□ -0.49
SSH1-201ENST00000326470 FBN2P35556 2912 aa12□□□□□ -0.49
SSH1-201ENST00000326470 DAZ2Q13117 558 aaKnown RBP11.99□□□□□ -0.49
SSH1-201ENST00000326470 C18orf65Q6ZTR6 163 aa11.99□□□□□ -0.49
SSH1-201ENST00000326470 DAZ4Q86SG3 579 aaKnown RBP11.99□□□□□ -0.49
SSH1-201ENST00000326470 PRIMA1Q86XR5 153 aa11.99□□□□□ -0.49
SSH1-201ENST00000326470 LINC01356Q8N9X3 169 aa11.99□□□□□ -0.49
SSH1-201ENST00000326470 FAM110AQ9BQ89 295 aa11.99□□□□□ -0.49
SSH1-201ENST00000326470 DAZ3Q9NR90 486 aaKnown RBP11.99□□□□□ -0.49
SSH1-201ENST00000326470 ABCA12Q86UK0 2595 aa11.99□□□□□ -0.49
SSH1-201ENST00000326470 NDUFA7O95182 113 aa11.99□□□□□ -0.49
SSH1-201ENST00000326470 LINC00643Q86TS7 51 aa11.99□□□□□ -0.49
SSH1-201ENST00000326470 SMIM20Q8N5G0 67 aa11.99□□□□□ -0.49
SSH1-201ENST00000326470 SMCR5Q8TEV8 140 aa11.99□□□□□ -0.49
SSH1-201ENST00000326470 FAM236AA0A1B0GUQ0 79 aa11.98□□□□□ -0.49
SSH1-201ENST00000326470 FAM236BA0A1B0GV22 79 aa11.98□□□□□ -0.49
SSH1-201ENST00000326470 TRAV13-1A0A0B4J241 112 aa11.98□□□□□ -0.49
SSH1-201ENST00000326470 BAALC-AS2P0C853 105 aa11.98□□□□□ -0.49
SSH1-201ENST00000326470 HERV-K104P63124 156 aa11.98□□□□□ -0.49
SSH1-201ENST00000326470 PPDPFQ9H3Y8 114 aa11.98□□□□□ -0.49
SSH1-201ENST00000326470 SDIM1Q6ZPB5 146 aa11.97□□□□□ -0.49
SSH1-201ENST00000326470 PEMTQ9UBM1 199 aa11.97□□□□□ -0.49
SSH1-201ENST00000326470 PTPN13Q12923 2485 aa11.97□□□□□ -0.49
SSH1-201ENST00000326470 F5H768 121 aa11.97□□□□□ -0.49
SSH1-201ENST00000326470 C22orf24Q9Y442 160 aa11.96□□□□□ -0.49
SSH1-201ENST00000326470 J3QLI3 93 aa11.96□□□□□ -0.5
SSH1-201ENST00000326470 FAM222AQ5U5X8 452 aa11.96□□□□□ -0.5
SSH1-201ENST00000326470 Q6YL49 198 aa11.95□□□□□ -0.5
SSH1-201ENST00000326470 NTM-AS1Q6ZSK4 140 aa11.95□□□□□ -0.5
SSH1-201ENST00000326470 FAM218AQ96MZ4 157 aa11.95□□□□□ -0.5
SSH1-201ENST00000326470 RPL36AP83881 106 aaKnown RBP11.95□□□□□ -0.5
SSH1-201ENST00000326470 RPL36ALQ969Q0 106 aaKnown RBP11.95□□□□□ -0.5
SSH1-201ENST00000326470 TMEM126AQ9H061 195 aa11.95□□□□□ -0.5
SSH1-201ENST00000326470 CDC42SE2Q9NRR3 84 aa11.95□□□□□ -0.5
SSH1-201ENST00000326470 TRBV10-1A0A0K0K1A3 114 aa11.94□□□□□ -0.5
SSH1-201ENST00000326470 HIST2H2BCQ6DN03 193 aa11.94□□□□□ -0.5
SSH1-201ENST00000326470 HIST2H2BDQ6DRA6 164 aa11.94□□□□□ -0.5
SSH1-201ENST00000326470 DYNLRB2Q8TF09 96 aa11.94□□□□□ -0.5
SSH1-201ENST00000326470 IL17DQ8TAD2 202 aa11.93□□□□□ -0.5
SSH1-201ENST00000326470 XCL2Q9UBD3 114 aa11.93□□□□□ -0.5
SSH1-201ENST00000326470 TRGV1A0A0A0MS02 117 aa11.92□□□□□ -0.5
SSH1-201ENST00000326470 K7EQD1 137 aa11.92□□□□□ -0.5
SSH1-201ENST00000326470 PF4P02776 101 aa11.92□□□□□ -0.5
SSH1-201ENST00000326470 INAFM2P0DMQ5 153 aa11.92□□□□□ -0.5
SSH1-201ENST00000326470 DEFB114Q30KQ6 69 aa11.92□□□□□ -0.5
SSH1-201ENST00000326470 A0A096LNT2 108 aa11.91□□□□□ -0.5
SSH1-201ENST00000326470 TRAV13-2A0A0B4J235 113 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms