RNA–Protein interactions for RNA: ENST00000324238.6

CRLF3-201, Transcript of cytokine receptor like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRLF3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-201ENST00000324238 RNF183Q96D59 192 aa14.39□□□□□ -0.11
CRLF3-201ENST00000324238 DSCR9P59020 149 aa14.38□□□□□ -0.11
CRLF3-201ENST00000324238 COX6A2Q02221 97 aa14.38□□□□□ -0.11
CRLF3-201ENST00000324238 VSIG2Q96IQ7 327 aa14.38□□□□□ -0.11
CRLF3-201ENST00000324238 TENM4Q6N022 2769 aa14.38□□□□□ -0.11
CRLF3-201ENST00000324238 DYNLRB2Q8TF09 96 aa14.37□□□□□ -0.11
CRLF3-201ENST00000324238 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.37□□□□□ -0.11
CRLF3-201ENST00000324238 ATXN8Q156A1 80 aa14.36□□□□□ -0.11
CRLF3-201ENST00000324238 DGAT2L7PQ6IED9 249 aa14.36□□□□□ -0.11
CRLF3-201ENST00000324238 ICOSQ9Y6W8 199 aa14.35□□□□□ -0.11
CRLF3-201ENST00000324238 TRAV4A0A0B4J268 109 aa14.35□□□□□ -0.11
CRLF3-201ENST00000324238 MAP6D1Q9H9H5 199 aa14.35□□□□□ -0.11
CRLF3-201ENST00000324238 PYGO1Q9Y3Y4 419 aa14.35□□□□□ -0.11
CRLF3-201ENST00000324238 HIVEP2P31629 2446 aa14.34□□□□□ -0.11
CRLF3-201ENST00000324238 LINC00694P0DN24 101 aa14.34□□□□□ -0.11
CRLF3-201ENST00000324238 CR1P17927 2039 aa14.34□□□□□ -0.11
CRLF3-201ENST00000324238 TRAV13-1A0A0B4J241 112 aa14.34□□□□□ -0.11
CRLF3-201ENST00000324238 TMEM89A2RUT3 159 aa14.34□□□□□ -0.11
CRLF3-201ENST00000324238 ZNF415Q09FC8 603 aa14.34□□□□□ -0.11
CRLF3-201ENST00000324238 C2orf82Q6UX34 121 aa14.33□□□□□ -0.12
CRLF3-201ENST00000324238 RPL13AP40429 203 aaKnown RBP14.33□□□□□ -0.12
CRLF3-201ENST00000324238 C11orf72Q8NBR9 251 aa14.32□□□□□ -0.12
CRLF3-201ENST00000324238 TRGV1A0A0A0MS02 117 aa14.32□□□□□ -0.12
CRLF3-201ENST00000324238 TMEM101Q96IK0 257 aa14.32□□□□□ -0.12
CRLF3-201ENST00000324238 H7C423 109 aa14.31□□□□□ -0.12
CRLF3-201ENST00000324238 MIAQ16674 131 aa14.31□□□□□ -0.12
CRLF3-201ENST00000324238 GCN1Q92616 2671 aaKnown RBP14.31□□□□□ -0.12
CRLF3-201ENST00000324238 TINCRA0A1B0GVN0 87 aa14.31□□□□□ -0.12
CRLF3-201ENST00000324238 HELZ2Q9BYK8 2649 aaKnown RBP14.31□□□□□ -0.12
CRLF3-201ENST00000324238 J3QLI3 93 aa14.3□□□□□ -0.12
CRLF3-201ENST00000324238 ANAPC13Q9BS18 74 aa14.3□□□□□ -0.12
CRLF3-201ENST00000324238 Q9H8V8 135 aa14.3□□□□□ -0.12
CRLF3-201ENST00000324238 TRBV30A0A0K0K1B3 111 aa14.29□□□□□ -0.12
CRLF3-201ENST00000324238 TEX29Q8N6K0 151 aa14.29□□□□□ -0.12
CRLF3-201ENST00000324238 ZFAND6Q6FIF0 208 aa14.29□□□□□ -0.12
CRLF3-201ENST00000324238 WFDC11Q8NEX6 87 aa14.29□□□□□ -0.12
CRLF3-201ENST00000324238 TRBV10-2A0A0K0K1G8 114 aa14.28□□□□□ -0.12
CRLF3-201ENST00000324238 DEFB113Q30KQ7 82 aa14.28□□□□□ -0.12
CRLF3-201ENST00000324238 TTC32Q5I0X7 151 aa14.28□□□□□ -0.12
CRLF3-201ENST00000324238 ZNF843Q8N446 348 aa14.28□□□□□ -0.12
CRLF3-201ENST00000324238 IGKV3OR2-268A0A0C4DH90 116 aa14.28□□□□□ -0.12
CRLF3-201ENST00000324238 PLA2G2AP14555 144 aa14.28□□□□□ -0.12
CRLF3-201ENST00000324238 SPANXA1Q9NS26 97 aa14.28□□□□□ -0.12
CRLF3-201ENST00000324238 Q6ZTI0 123 aa14.27□□□□□ -0.13
CRLF3-201ENST00000324238 FASNP49327 2511 aaKnown RBP14.27□□□□□ -0.13
CRLF3-201ENST00000324238 TRAV8-4A0A0B4J246 113 aa14.26□□□□□ -0.13
CRLF3-201ENST00000324238 DEFB114Q30KQ6 69 aa14.26□□□□□ -0.13
CRLF3-201ENST00000324238 UBE2WQ96B02 151 aa14.26□□□□□ -0.13
CRLF3-201ENST00000324238 HECTD1Q9ULT8 2610 aa14.26□□□□□ -0.13
CRLF3-201ENST00000324238 GAGE12JA6NER3 117 aa14.25□□□□□ -0.13
CRLF3-201ENST00000324238 TMEM262E9PQX1 116 aa14.25□□□□□ -0.13
CRLF3-201ENST00000324238 SNCGO76070 127 aa14.25□□□□□ -0.13
CRLF3-201ENST00000324238 GAGE4Q13068 117 aa14.25□□□□□ -0.13
CRLF3-201ENST00000324238 GAGE5Q13069 117 aa14.25□□□□□ -0.13
CRLF3-201ENST00000324238 WFDC10AQ9H1F0 79 aa14.25□□□□□ -0.13
CRLF3-201ENST00000324238 CITED2Q99967 270 aaPredicted RBP14.25□□□□□ -0.13
CRLF3-201ENST00000324238 SPANXDQ9BXN6 97 aa14.25□□□□□ -0.13
CRLF3-201ENST00000324238 SPANXCQ9NY87 97 aa14.25□□□□□ -0.13
CRLF3-201ENST00000324238 INSP01308 110 aa14.25□□□□□ -0.13
CRLF3-201ENST00000324238 LINC00242Q5T6M2 205 aa14.25□□□□□ -0.13
CRLF3-201ENST00000324238 Q8N2B8 174 aa14.25□□□□□ -0.13
CRLF3-201ENST00000324238 ODF3L2Q3SX64 289 aa14.24□□□□□ -0.13
CRLF3-201ENST00000324238 C15orf53Q8NAA6 179 aa14.24□□□□□ -0.13
CRLF3-201ENST00000324238 COX6CP09669 75 aa14.24□□□□□ -0.13
CRLF3-201ENST00000324238 GAGE2BQ13066 116 aa14.24□□□□□ -0.13
CRLF3-201ENST00000324238 GAGE2EQ4V326 116 aa14.24□□□□□ -0.13
CRLF3-201ENST00000324238 GAGE2DQ9UEU5 116 aa14.24□□□□□ -0.13
CRLF3-201ENST00000324238 FSHBP01225 129 aa14.23□□□□□ -0.13
CRLF3-201ENST00000324238 CITED1Q99966 193 aa14.23□□□□□ -0.13
CRLF3-201ENST00000324238 PEMTQ9UBM1 199 aa14.23□□□□□ -0.13
CRLF3-201ENST00000324238 SOSTDC1Q6X4U4 206 aa14.23□□□□□ -0.13
CRLF3-201ENST00000324238 NTM-AS1Q6ZSK4 140 aa14.23□□□□□ -0.13
CRLF3-201ENST00000324238 C1orf158Q8N1D5 194 aa14.23□□□□□ -0.13
CRLF3-201ENST00000324238 RNF152Q8N8N0 203 aa14.22□□□□□ -0.13
CRLF3-201ENST00000324238 LOC100131303A0A0U1RQF7 123 aa14.22□□□□□ -0.13
CRLF3-201ENST00000324238 NHLRC4P0CG21 123 aaPredicted RBP14.21□□□□□ -0.13
CRLF3-201ENST00000324238 MEIG1Q5JSS6 88 aa14.21□□□□□ -0.13
CRLF3-201ENST00000324238 STHQ8IWL8 128 aa14.21□□□□□ -0.13
CRLF3-201ENST00000324238 SS18L2Q9UHA2 77 aa14.21□□□□□ -0.13
CRLF3-201ENST00000324238 PIK3CD-AS1Q5SR53 167 aa14.21□□□□□ -0.14
CRLF3-201ENST00000324238 LINC00308Q8TCZ7 52 aa14.21□□□□□ -0.14
CRLF3-201ENST00000324238 B5MCH6 92 aa14.2□□□□□ -0.14
CRLF3-201ENST00000324238 RS1O15537 224 aa14.2□□□□□ -0.14
CRLF3-201ENST00000324238 EDA2RQ9HAV5 297 aa14.2□□□□□ -0.14
CRLF3-201ENST00000324238 PRIMA1Q86XR5 153 aa14.2□□□□□ -0.14
CRLF3-201ENST00000324238 NOP10Q9NPE3 64 aaKnown RBP14.2□□□□□ -0.14
CRLF3-201ENST00000324238 VWFP04275 2813 aa14.19□□□□□ -0.14
CRLF3-201ENST00000324238 LST1O00453 97 aa14.19□□□□□ -0.14
CRLF3-201ENST00000324238 C4orf3Q8WVX3 66 aa14.19□□□□□ -0.14
CRLF3-201ENST00000324238 ESM1Q9NQ30 184 aa14.19□□□□□ -0.14
CRLF3-201ENST00000324238 NDUFA1O15239 70 aa14.18□□□□□ -0.14
CRLF3-201ENST00000324238 BEAN1Q3B7T3 259 aa14.18□□□□□ -0.14
CRLF3-201ENST00000324238 RPL35AP18077 110 aaKnown RBP14.18□□□□□ -0.14
CRLF3-201ENST00000324238 DNAJC9-AS1A6NH13 148 aa14.17□□□□□ -0.14
CRLF3-201ENST00000324238 A8MTW9 85 aa14.17□□□□□ -0.14
CRLF3-201ENST00000324238 SMIM1B2RUZ4 78 aa14.17□□□□□ -0.14
CRLF3-201ENST00000324238 CIRBPQ14011 172 aaKnown RBP14.16□□□□□ -0.14
CRLF3-201ENST00000324238 YAE1D1Q9NRH1 226 aa14.16□□□□□ -0.14
CRLF3-201ENST00000324238 TOMM7Q9P0U1 55 aa14.16□□□□□ -0.14
CRLF3-201ENST00000324238 CCDC179H3BU77 68 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms