RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 CRIP2P52943 208 aaPredicted RBP7.97□□□□□ -1.13
SNRNP200-201ENST00000323853 COX17Q14061 63 aa7.96□□□□□ -1.13
SNRNP200-201ENST00000323853 FAM236DA0A1B0GTK5 79 aa7.96□□□□□ -1.14
SNRNP200-201ENST00000323853 FAM236CP0DP71 79 aa7.96□□□□□ -1.14
SNRNP200-201ENST00000323853 SYCNQ0VAF6 134 aa7.96□□□□□ -1.14
SNRNP200-201ENST00000323853 IGLV4-69A0A075B6H9 119 aa7.96□□□□□ -1.14
SNRNP200-201ENST00000323853 LELP1Q5T871 98 aa7.96□□□□□ -1.14
SNRNP200-201ENST00000323853 DOCK10Q96BY6 2186 aa7.96□□□□□ -1.14
SNRNP200-201ENST00000323853 M0R378 163 aa7.95□□□□□ -1.14
SNRNP200-201ENST00000323853 C20orf197Q8N268 126 aa7.95□□□□□ -1.14
SNRNP200-201ENST00000323853 SHISA2Q6UWI4 295 aa7.95□□□□□ -1.14
SNRNP200-201ENST00000323853 CDC42SE2Q9NRR3 84 aa7.95□□□□□ -1.14
SNRNP200-201ENST00000323853 CLUHP3Q96NS8 147 aa7.95□□□□□ -1.14
SNRNP200-201ENST00000323853 NCOA6Q14686 2063 aaPredicted RBP7.95□□□□□ -1.14
SNRNP200-201ENST00000323853 TRAV10A0A0B4J240 114 aa7.95□□□□□ -1.14
SNRNP200-201ENST00000323853 TECTAO75443 2155 aa7.94□□□□□ -1.14
SNRNP200-201ENST00000323853 POM121L12Q8N7R1 296 aa7.94□□□□□ -1.14
SNRNP200-201ENST00000323853 IGKV4-1P06312 121 aa7.94□□□□□ -1.14
SNRNP200-201ENST00000323853 PKDREJQ9NTG1 2253 aa7.94□□□□□ -1.14
SNRNP200-201ENST00000323853 AVPP01185 164 aa7.94□□□□□ -1.14
SNRNP200-201ENST00000323853 KIR2DL5BQ8NHK3 375 aa7.94□□□□□ -1.14
SNRNP200-201ENST00000323853 MRGPRG-AS1Q2M3A8 158 aa7.93□□□□□ -1.14
SNRNP200-201ENST00000323853 CHCHD7Q9BUK0 85 aa7.93□□□□□ -1.14
SNRNP200-201ENST00000323853 A0A087WZ39 114 aa7.93□□□□□ -1.14
SNRNP200-201ENST00000323853 COX8CQ7Z4L0 72 aa7.93□□□□□ -1.14
SNRNP200-201ENST00000323853 Q8IZM0 81 aa7.93□□□□□ -1.14
SNRNP200-201ENST00000323853 IMUPQ9GZP8 106 aa7.93□□□□□ -1.14
SNRNP200-201ENST00000323853 DHRS4-AS1Q9P1J3 65 aa7.93□□□□□ -1.14
SNRNP200-201ENST00000323853 CEP250Q9BV73 2442 aa7.93□□□□□ -1.14
SNRNP200-201ENST00000323853 ARFGEF3Q5TH69 2177 aa7.93□□□□□ -1.14
SNRNP200-201ENST00000323853 SPTA1P02549 2419 aa7.92□□□□□ -1.14
SNRNP200-201ENST00000323853 MED12LQ86YW9 2145 aa7.92□□□□□ -1.14
SNRNP200-201ENST00000323853 IGKV2-28A0A075B6P5 120 aa7.92□□□□□ -1.14
SNRNP200-201ENST00000323853 IGKV2D-28P01615 120 aa7.92□□□□□ -1.14
SNRNP200-201ENST00000323853 CCKP06307 115 aa7.92□□□□□ -1.14
SNRNP200-201ENST00000323853 KPRPQ5T749 579 aaPredicted RBP7.92□□□□□ -1.14
SNRNP200-201ENST00000323853 LINC00526Q96FQ7 95 aa7.92□□□□□ -1.14
SNRNP200-201ENST00000323853 RAI1Q7Z5J4 1906 aaPredicted RBP7.92□□□□□ -1.14
SNRNP200-201ENST00000323853 BRK1Q8WUW1 75 aa7.91□□□□□ -1.14
SNRNP200-201ENST00000323853 ZGRF1Q86YA3 2104 aa7.91□□□□□ -1.14
SNRNP200-201ENST00000323853 COX6A2Q02221 97 aa7.91□□□□□ -1.14
SNRNP200-201ENST00000323853 ADAMTS20P59510 1910 aa7.9□□□□□ -1.14
SNRNP200-201ENST00000323853 FREM1Q5H8C1 2179 aa7.9□□□□□ -1.14
SNRNP200-201ENST00000323853 C3orf84H3BNL1 204 aa7.9□□□□□ -1.14
SNRNP200-201ENST00000323853 BRI3O95415 125 aa7.9□□□□□ -1.14
SNRNP200-201ENST00000323853 Q6ZQY7 126 aa7.9□□□□□ -1.14
SNRNP200-201ENST00000323853 WFDC10BQ8IUB3 73 aa7.9□□□□□ -1.14
SNRNP200-201ENST00000323853 A0A096LNI7 61 aa7.9□□□□□ -1.14
SNRNP200-201ENST00000323853 NDUFA7O95182 113 aa7.9□□□□□ -1.14
SNRNP200-201ENST00000323853 LINC00242Q5T6M2 205 aa7.9□□□□□ -1.14
SNRNP200-201ENST00000323853 XGP55808 180 aa7.9□□□□□ -1.14
SNRNP200-201ENST00000323853 C1orf158Q8N1D5 194 aa7.9□□□□□ -1.14
SNRNP200-201ENST00000323853 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.9□□□□□ -1.15
SNRNP200-201ENST00000323853 TSPEAR-AS2P59090 65 aa7.9□□□□□ -1.15
SNRNP200-201ENST00000323853 MPLKIPQ8TAP9 179 aa7.9□□□□□ -1.15
SNRNP200-201ENST00000323853 LOC107984640A0A0U1RRK4 108 aa7.89□□□□□ -1.15
SNRNP200-201ENST00000323853 MUC7Q8TAX7 377 aa7.89□□□□□ -1.15
SNRNP200-201ENST00000323853 COL6A6A6NMZ7 2263 aa7.89□□□□□ -1.15
SNRNP200-201ENST00000323853 SERP2Q8N6R1 65 aa7.89□□□□□ -1.15
SNRNP200-201ENST00000323853 NDUFC2-KCTD14E9PQ53 114 aa7.89□□□□□ -1.15
SNRNP200-201ENST00000323853 SEC61GP60059 68 aa7.89□□□□□ -1.15
SNRNP200-201ENST00000323853 NCOR1O75376 2440 aa7.89□□□□□ -1.15
SNRNP200-201ENST00000323853 ZNF73O43830 326 aaPredicted RBP7.88□□□□□ -1.15
SNRNP200-201ENST00000323853 APC2O95996 2303 aa7.88□□□□□ -1.15
SNRNP200-201ENST00000323853 ODF3L2Q3SX64 289 aa7.88□□□□□ -1.15
SNRNP200-201ENST00000323853 Q6JHZ5 121 aa7.88□□□□□ -1.15
SNRNP200-201ENST00000323853 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.88□□□□□ -1.15
SNRNP200-201ENST00000323853 ZNF318Q5VUA4 2279 aa7.88□□□□□ -1.15
SNRNP200-201ENST00000323853 POLEQ07864 2286 aa7.88□□□□□ -1.15
SNRNP200-201ENST00000323853 SMIM1B2RUZ4 78 aa7.88□□□□□ -1.15
SNRNP200-201ENST00000323853 EP300Q09472 2414 aaPredicted RBP7.88□□□□□ -1.15
SNRNP200-201ENST00000323853 IGLV2-18A0A075B6J9 118 aa7.88□□□□□ -1.15
SNRNP200-201ENST00000323853 CCDC179H3BU77 68 aa7.88□□□□□ -1.15
SNRNP200-201ENST00000323853 ATP5EP56381 51 aaPredicted RBP7.88□□□□□ -1.15
SNRNP200-201ENST00000323853 USP17L23D6RBM5 183 aa7.87□□□□□ -1.15
SNRNP200-201ENST00000323853 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.87□□□□□ -1.15
SNRNP200-201ENST00000323853 A0A096LNJ9 63 aa7.87□□□□□ -1.15
SNRNP200-201ENST00000323853 RPL37AP8A6NKH3 93 aa7.87□□□□□ -1.15
SNRNP200-201ENST00000323853 AMELXQ99217 191 aa7.87□□□□□ -1.15
SNRNP200-201ENST00000323853 ZNF580Q9UK33 172 aa7.87□□□□□ -1.15
SNRNP200-201ENST00000323853 GPR179Q6PRD1 2367 aa7.86□□□□□ -1.15
SNRNP200-201ENST00000323853 A0A0J9YWU9 116 aa7.86□□□□□ -1.15
SNRNP200-201ENST00000323853 ZNF706Q9Y5V0 76 aaPredicted RBP7.86□□□□□ -1.15
SNRNP200-201ENST00000323853 CYSRT1A8MQ03 144 aa7.86□□□□□ -1.15
SNRNP200-201ENST00000323853 NDUFC1O43677 76 aa7.86□□□□□ -1.15
SNRNP200-201ENST00000323853 NANOS2P60321 138 aaKnown RBP7.85□□□□□ -1.15
SNRNP200-201ENST00000323853 SNURFQ9Y675 71 aa7.85□□□□□ -1.15
SNRNP200-201ENST00000323853 COX7CP15954 63 aa7.85□□□□□ -1.15
SNRNP200-201ENST00000323853 CADP27708 2225 aa7.85□□□□□ -1.15
SNRNP200-201ENST00000323853 LINC00694P0DN24 101 aa7.85□□□□□ -1.15
SNRNP200-201ENST00000323853 Q6Q795 121 aa7.85□□□□□ -1.15
SNRNP200-201ENST00000323853 C16orf95Q9H693 158 aa7.85□□□□□ -1.15
SNRNP200-201ENST00000323853 EXPH5Q8NEV8 1989 aa7.85□□□□□ -1.15
SNRNP200-201ENST00000323853 PLA2G2AP14555 144 aa7.85□□□□□ -1.15
SNRNP200-201ENST00000323853 IGHV4-30-4P0DP06 118 aa7.84□□□□□ -1.15
SNRNP200-201ENST00000323853 FHL2Q14192 279 aa7.84□□□□□ -1.15
SNRNP200-201ENST00000323853 PCNX2A6NKB5 2137 aa7.84□□□□□ -1.15
SNRNP200-201ENST00000323853 A0A087WYN8 130 aa7.84□□□□□ -1.15
SNRNP200-201ENST00000323853 RPL28P46779 137 aaKnown RBP7.84□□□□□ -1.15
SNRNP200-201ENST00000323853 Q8N814 137 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms