RNA–Protein interactions for RNA: ENST00000323055.10

PPP3CA-201, Transcript of protein phosphatase 3 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP3CA, Length 4,519 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CA-201ENST00000323055 POLR2KP53803 58 aaKnown RBP12.52□□□□□ -0.4
PPP3CA-201ENST00000323055 COX7B2Q8TF08 81 aa12.52□□□□□ -0.4
PPP3CA-201ENST00000323055 ZMAT4Q9H898 229 aa12.52□□□□□ -0.4
PPP3CA-201ENST00000323055 USP24Q9UPU5 2620 aa12.52□□□□□ -0.4
PPP3CA-201ENST00000323055 TRAV13-2A0A0B4J235 113 aa12.52□□□□□ -0.4
PPP3CA-201ENST00000323055 HERV-K104P63124 156 aa12.52□□□□□ -0.4
PPP3CA-201ENST00000323055 PPDPFLQ8WWR9 84 aa12.52□□□□□ -0.4
PPP3CA-201ENST00000323055 FLNAP21333 2647 aaKnown RBP12.52□□□□□ -0.41
PPP3CA-201ENST00000323055 NTN5Q8WTR8 489 aaPredicted RBP12.52□□□□□ -0.41
PPP3CA-201ENST00000323055 SND1-IT1Q9HBX3 110 aa12.52□□□□□ -0.41
PPP3CA-201ENST00000323055 SOCS3O14543 225 aa12.51□□□□□ -0.41
PPP3CA-201ENST00000323055 WFDC2Q14508 124 aa12.51□□□□□ -0.41
PPP3CA-201ENST00000323055 Q8N976 141 aa12.51□□□□□ -0.41
PPP3CA-201ENST00000323055 TEX48A0A1B0GUV7 120 aa12.51□□□□□ -0.41
PPP3CA-201ENST00000323055 ZNF22P17026 224 aaPredicted RBP12.51□□□□□ -0.41
PPP3CA-201ENST00000323055 C1orf43Q9BWL3 253 aa12.51□□□□□ -0.41
PPP3CA-201ENST00000323055 FRYLO94915 3013 aa12.5□□□□□ -0.41
PPP3CA-201ENST00000323055 IFITM1P13164 125 aa12.5□□□□□ -0.41
PPP3CA-201ENST00000323055 TRBV6-5A0A0K0K1A5 114 aa12.5□□□□□ -0.41
PPP3CA-201ENST00000323055 OVOL2Q9BRP0 275 aa12.5□□□□□ -0.41
PPP3CA-201ENST00000323055 TSHBP01222 138 aa12.49□□□□□ -0.41
PPP3CA-201ENST00000323055 FAM110AQ9BQ89 295 aa12.49□□□□□ -0.41
PPP3CA-201ENST00000323055 COX8CQ7Z4L0 72 aa12.48□□□□□ -0.41
PPP3CA-201ENST00000323055 BRI3O95415 125 aa12.48□□□□□ -0.41
PPP3CA-201ENST00000323055 LOC100131303A0A0U1RQF7 123 aa12.48□□□□□ -0.41
PPP3CA-201ENST00000323055 A8MZ25 164 aa12.48□□□□□ -0.41
PPP3CA-201ENST00000323055 ITPR3Q14573 2671 aa12.48□□□□□ -0.41
PPP3CA-201ENST00000323055 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.47□□□□□ -0.41
PPP3CA-201ENST00000323055 HELZ2Q9BYK8 2649 aaKnown RBP12.47□□□□□ -0.41
PPP3CA-201ENST00000323055 RS1O15537 224 aa12.47□□□□□ -0.41
PPP3CA-201ENST00000323055 MIR7-3HGQ8N6C7 128 aa12.47□□□□□ -0.41
PPP3CA-201ENST00000323055 FRYQ5TBA9 3013 aa12.47□□□□□ -0.41
PPP3CA-201ENST00000323055 NKAPP1Q8N9T2 125 aa12.47□□□□□ -0.41
PPP3CA-201ENST00000323055 ANAPC13Q9BS18 74 aa12.47□□□□□ -0.41
PPP3CA-201ENST00000323055 RNASE8Q8TDE3 154 aaKnown RBP12.47□□□□□ -0.41
PPP3CA-201ENST00000323055 A0A0J9YXY3 114 aa12.46□□□□□ -0.41
PPP3CA-201ENST00000323055 NFE4Q86UQ8 179 aa12.46□□□□□ -0.41
PPP3CA-201ENST00000323055 FREM2Q5SZK8 3169 aa12.46□□□□□ -0.41
PPP3CA-201ENST00000323055 ZFAND6Q6FIF0 208 aa12.46□□□□□ -0.42
PPP3CA-201ENST00000323055 CAMK2N2Q96S95 79 aa12.46□□□□□ -0.42
PPP3CA-201ENST00000323055 TINCRA0A1B0GVN0 87 aa12.45□□□□□ -0.42
PPP3CA-201ENST00000323055 REV3LO60673 3130 aa12.45□□□□□ -0.42
PPP3CA-201ENST00000323055 COL27A1Q8IZC6 1860 aaPredicted RBP12.45□□□□□ -0.42
PPP3CA-201ENST00000323055 BOD1L1Q8NFC6 3051 aa12.45□□□□□ -0.42
PPP3CA-201ENST00000323055 HIST1H4AP62805 103 aaKnown RBP12.45□□□□□ -0.42
PPP3CA-201ENST00000323055 C2orf91Q6ZV80 131 aa12.45□□□□□ -0.42
PPP3CA-201ENST00000323055 LINC00269Q8N2A0 174 aa12.45□□□□□ -0.42
PPP3CA-201ENST00000323055 A0A096LNJ9 63 aa12.44□□□□□ -0.42
PPP3CA-201ENST00000323055 ATRQ13535 2644 aa12.43□□□□□ -0.42
PPP3CA-201ENST00000323055 ZNF580Q9UK33 172 aa12.43□□□□□ -0.42
PPP3CA-201ENST00000323055 TMEM223A0PJW6 202 aa12.42□□□□□ -0.42
PPP3CA-201ENST00000323055 SMIM9A6NGZ8 99 aa12.42□□□□□ -0.42
PPP3CA-201ENST00000323055 SPAG11BQ08648 103 aa12.42□□□□□ -0.42
PPP3CA-201ENST00000323055 GAGE12HA6NDE8 117 aa12.42□□□□□ -0.42
PPP3CA-201ENST00000323055 CCL18P55774 89 aa12.42□□□□□ -0.42
PPP3CA-201ENST00000323055 TRBV6-8A0A0A6YYG3 113 aa12.41□□□□□ -0.42
PPP3CA-201ENST00000323055 TRBV6-4A0A1B0GX49 114 aa12.41□□□□□ -0.42
PPP3CA-201ENST00000323055 OXLD1Q5BKU9 147 aa12.41□□□□□ -0.42
PPP3CA-201ENST00000323055 PTH2Q96A98 100 aa12.41□□□□□ -0.42
PPP3CA-201ENST00000323055 INAFM2P0DMQ5 153 aa12.41□□□□□ -0.42
PPP3CA-201ENST00000323055 CLEC2BQ92478 149 aa12.41□□□□□ -0.42
PPP3CA-201ENST00000323055 TM2D2Q9BX73 214 aa12.41□□□□□ -0.42
PPP3CA-201ENST00000323055 BAALC-AS2P0C853 105 aa12.41□□□□□ -0.42
PPP3CA-201ENST00000323055 RPL32P62910 135 aaKnown RBP12.41□□□□□ -0.42
PPP3CA-201ENST00000323055 NBEAQ8NFP9 2946 aa12.4□□□□□ -0.42
PPP3CA-201ENST00000323055 LYRM9A8MSI8 78 aa12.4□□□□□ -0.42
PPP3CA-201ENST00000323055 LINC01620Q4KN68 170 aa12.4□□□□□ -0.42
PPP3CA-201ENST00000323055 ANKRD29Q8N6D5 301 aa12.4□□□□□ -0.42
PPP3CA-201ENST00000323055 MGAM2Q2M2H8 2515 aa12.4□□□□□ -0.42
PPP3CA-201ENST00000323055 C1orf158Q8N1D5 194 aa12.4□□□□□ -0.43
PPP3CA-201ENST00000323055 IGLV1-51P01701 117 aa12.39□□□□□ -0.43
PPP3CA-201ENST00000323055 RMI2Q96E14 147 aa12.39□□□□□ -0.43
PPP3CA-201ENST00000323055 IGHV4-28A0A0C4DH34 117 aa12.39□□□□□ -0.43
PPP3CA-201ENST00000323055 MUC4Q99102 2169 aa12.38□□□□□ -0.43
PPP3CA-201ENST00000323055 IGIPA6NJ69 53 aa12.38□□□□□ -0.43
PPP3CA-201ENST00000323055 MIAQ16674 131 aa12.38□□□□□ -0.43
PPP3CA-201ENST00000323055 PYGO1Q9Y3Y4 419 aa12.38□□□□□ -0.43
PPP3CA-201ENST00000323055 REG3AQ06141 175 aa12.38□□□□□ -0.43
PPP3CA-201ENST00000323055 C11orf45Q8TAV5 145 aa12.38□□□□□ -0.43
PPP3CA-201ENST00000323055 UBE2D4Q9Y2X8 147 aa12.36□□□□□ -0.43
PPP3CA-201ENST00000323055 NDUFA7O95182 113 aa12.36□□□□□ -0.43
PPP3CA-201ENST00000323055 PRB2P02812 416 aaPredicted RBP12.36□□□□□ -0.43
PPP3CA-201ENST00000323055 CRYBA4P53673 196 aa12.36□□□□□ -0.43
PPP3CA-201ENST00000323055 SPTBN5Q9NRC6 3674 aaKnown RBP12.35□□□□□ -0.43
PPP3CA-201ENST00000323055 RBX1P62877 108 aa12.35□□□□□ -0.43
PPP3CA-201ENST00000323055 RPL18AQ02543 176 aaKnown RBP12.35□□□□□ -0.43
PPP3CA-201ENST00000323055 MIFP14174 115 aa12.35□□□□□ -0.43
PPP3CA-201ENST00000323055 HIGD2BQ4VC39 106 aa12.35□□□□□ -0.43
PPP3CA-201ENST00000323055 PIK3CD-AS1Q5SR53 167 aa12.34□□□□□ -0.43
PPP3CA-201ENST00000323055 CHCHD10Q8WYQ3 142 aaPredicted RBP12.34□□□□□ -0.43
PPP3CA-201ENST00000323055 TEN1Q86WV5 123 aa12.34□□□□□ -0.43
PPP3CA-201ENST00000323055 NCR3O14931 201 aa12.34□□□□□ -0.43
PPP3CA-201ENST00000323055 NDUFA1O15239 70 aa12.34□□□□□ -0.43
PPP3CA-201ENST00000323055 TCL1BO95988 128 aa12.34□□□□□ -0.43
PPP3CA-201ENST00000323055 IGLV2-18A0A075B6J9 118 aa12.33□□□□□ -0.44
PPP3CA-201ENST00000323055 SHISA2Q6UWI4 295 aa12.33□□□□□ -0.44
PPP3CA-201ENST00000323055 DEFB131BA0A096LNP1 70 aa12.32□□□□□ -0.44
PPP3CA-201ENST00000323055 Q6ZSN1 163 aa12.32□□□□□ -0.44
PPP3CA-201ENST00000323055 C15orf53Q8NAA6 179 aa12.32□□□□□ -0.44
PPP3CA-201ENST00000323055 LECT2O14960 151 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms