RNA–Protein interactions for RNA: ENST00000320017.10

SCAP-202, Transcript of SREBF chaperone, humanhuman

TSL 2

Gene SCAP, Length 3,430 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-202ENST00000320017 NPBQ8NG41 125 aa11.09□□□□□ -0.63
SCAP-202ENST00000320017 CITED2Q99967 270 aaPredicted RBP11.09□□□□□ -0.63
SCAP-202ENST00000320017 HTN1P15515 57 aa11.09□□□□□ -0.63
SCAP-202ENST00000320017 SERP2Q8N6R1 65 aa11.09□□□□□ -0.63
SCAP-202ENST00000320017 HELZ2Q9BYK8 2649 aaKnown RBP11.08□□□□□ -0.64
SCAP-202ENST00000320017 MUC4Q99102 2169 aa11.08□□□□□ -0.64
SCAP-202ENST00000320017 IGHV3-73A0A0B4J1V6 119 aa11.08□□□□□ -0.64
SCAP-202ENST00000320017 CXCL5P42830 114 aa11.08□□□□□ -0.64
SCAP-202ENST00000320017 C5orf38Q86SI9 138 aa11.08□□□□□ -0.64
SCAP-202ENST00000320017 INAFM2P0DMQ5 153 aa11.07□□□□□ -0.64
SCAP-202ENST00000320017 CCDC140Q96MF4 163 aa11.07□□□□□ -0.64
SCAP-202ENST00000320017 COX7A2LO14548 114 aa11.07□□□□□ -0.64
SCAP-202ENST00000320017 IGHV1-69P01742 117 aa11.07□□□□□ -0.64
SCAP-202ENST00000320017 C11orf71Q6IPW1 123 aa11.07□□□□□ -0.64
SCAP-202ENST00000320017 UNQ9165/PRO28630Q6UXU0 137 aa11.07□□□□□ -0.64
SCAP-202ENST00000320017 C9orf139Q6ZV77 190 aa11.07□□□□□ -0.64
SCAP-202ENST00000320017 LY6G5BQ8NDX9 201 aa11.07□□□□□ -0.64
SCAP-202ENST00000320017 SPANXCQ9NY87 97 aa11.07□□□□□ -0.64
SCAP-202ENST00000320017 IGHV1-58A0A0C4DH39 117 aa11.07□□□□□ -0.64
SCAP-202ENST00000320017 A0A0J9YX75 114 aa11.07□□□□□ -0.64
SCAP-202ENST00000320017 C20orf203Q8NBC4 194 aa11.07□□□□□ -0.64
SCAP-202ENST00000320017 C14orf132Q9NPU4 83 aa11.07□□□□□ -0.64
SCAP-202ENST00000320017 CIRBPQ14011 172 aaKnown RBP11.06□□□□□ -0.64
SCAP-202ENST00000320017 IGHV4OR15-8A0A075B7B6 117 aa11.06□□□□□ -0.64
SCAP-202ENST00000320017 A0A087WW49 117 aa11.06□□□□□ -0.64
SCAP-202ENST00000320017 LINC00315P59091 139 aa11.06□□□□□ -0.64
SCAP-202ENST00000320017 BBC3Q96PG8 261 aaPredicted RBP11.06□□□□□ -0.64
SCAP-202ENST00000320017 TRBV27A0A0K0K1C4 114 aa11.06□□□□□ -0.64
SCAP-202ENST00000320017 USP17L23D6RBM5 183 aa11.06□□□□□ -0.64
SCAP-202ENST00000320017 EDN2P20800 178 aa11.05□□□□□ -0.64
SCAP-202ENST00000320017 PFN2P35080 140 aa11.05□□□□□ -0.64
SCAP-202ENST00000320017 Q5XG85 94 aa11.05□□□□□ -0.64
SCAP-202ENST00000320017 MRAPQ8TCY5 172 aa11.05□□□□□ -0.64
SCAP-202ENST00000320017 MRPL53Q96EL3 112 aaKnown RBP11.05□□□□□ -0.64
SCAP-202ENST00000320017 J3QLI3 93 aa11.05□□□□□ -0.64
SCAP-202ENST00000320017 Q8N2B8 174 aa11.05□□□□□ -0.64
SCAP-202ENST00000320017 ODF3BA8MYP8 253 aa11.04□□□□□ -0.64
SCAP-202ENST00000320017 KLK9Q9UKQ9 250 aa11.04□□□□□ -0.64
SCAP-202ENST00000320017 KIF25-AS1Q9Y6Z4 181 aa11.04□□□□□ -0.64
SCAP-202ENST00000320017 IGHV4-61A0A0C4DH41 118 aa11.03□□□□□ -0.64
SCAP-202ENST00000320017 RPL35AP18077 110 aaKnown RBP11.03□□□□□ -0.64
SCAP-202ENST00000320017 TINCRA0A1B0GVN0 87 aa11.03□□□□□ -0.64
SCAP-202ENST00000320017 FAM223AQ8IWN6 122 aa11.03□□□□□ -0.64
SCAP-202ENST00000320017 WFDC11Q8NEX6 87 aa11.03□□□□□ -0.64
SCAP-202ENST00000320017 TMEM243Q9BU79 118 aa11.03□□□□□ -0.64
SCAP-202ENST00000320017 PRIMA1Q86XR5 153 aa11.02□□□□□ -0.65
SCAP-202ENST00000320017 VSIG2Q96IQ7 327 aa11.02□□□□□ -0.65
SCAP-202ENST00000320017 LENEPQ9Y5L5 61 aa11.02□□□□□ -0.65
SCAP-202ENST00000320017 C20orf197Q8N268 126 aa11.02□□□□□ -0.65
SCAP-202ENST00000320017 TRAV12-2A0A075B6T6 113 aa11.01□□□□□ -0.65
SCAP-202ENST00000320017 Q9H8V8 135 aa11.01□□□□□ -0.65
SCAP-202ENST00000320017 IGHV4-30-2A0A087WSY4 118 aa11.01□□□□□ -0.65
SCAP-202ENST00000320017 WFDC9Q8NEX5 89 aa11□□□□□ -0.65
SCAP-202ENST00000320017 TRAV23DV6A0A075B6W5 121 aa11□□□□□ -0.65
SCAP-202ENST00000320017 HIST2H2BDQ6DRA6 164 aa11□□□□□ -0.65
SCAP-202ENST00000320017 LINC00336Q6ZUF6 198 aa11□□□□□ -0.65
SCAP-202ENST00000320017 FAM110DQ8TAY7 271 aaPredicted RBP11□□□□□ -0.65
SCAP-202ENST00000320017 FAM218AQ96MZ4 157 aa11□□□□□ -0.65
SCAP-202ENST00000320017 BLCAPP62952 87 aa11□□□□□ -0.65
SCAP-202ENST00000320017 M0QY20 66 aa10.99□□□□□ -0.65
SCAP-202ENST00000320017 MALP21145 153 aa10.99□□□□□ -0.65
SCAP-202ENST00000320017 FHL2Q14192 279 aa10.99□□□□□ -0.65
SCAP-202ENST00000320017 HIST2H2BCQ6DN03 193 aa10.99□□□□□ -0.65
SCAP-202ENST00000320017 LINC00308Q8TCZ7 52 aa10.99□□□□□ -0.65
SCAP-202ENST00000320017 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.99□□□□□ -0.65
SCAP-202ENST00000320017 IGKV2-29A2NJV5 120 aaPredicted RBP10.99□□□□□ -0.65
SCAP-202ENST00000320017 MED14OSP0DP75 135 aa10.99□□□□□ -0.65
SCAP-202ENST00000320017 A0A0U1RQV1 116 aa10.99□□□□□ -0.65
SCAP-202ENST00000320017 GHRHP01286 108 aa10.99□□□□□ -0.65
SCAP-202ENST00000320017 HILS1P60008 231 aa10.99□□□□□ -0.65
SCAP-202ENST00000320017 DGAT2L7PQ6IED9 249 aa10.99□□□□□ -0.65
SCAP-202ENST00000320017 FAM223BA6NKX1 122 aa10.98□□□□□ -0.65
SCAP-202ENST00000320017 LMO4P61968 165 aa10.98□□□□□ -0.65
SCAP-202ENST00000320017 LINC00846Q9NV44 126 aa10.98□□□□□ -0.65
SCAP-202ENST00000320017 Q8N6K4 173 aa10.98□□□□□ -0.65
SCAP-202ENST00000320017 FLNBO75369 2602 aaKnown RBP10.98□□□□□ -0.65
SCAP-202ENST00000320017 JMJD1CQ15652 2540 aa10.98□□□□□ -0.65
SCAP-202ENST00000320017 CDKN2A-AS1Q9UH64 79 aa10.97□□□□□ -0.65
SCAP-202ENST00000320017 KNCNA6PVL3 124 aa10.97□□□□□ -0.65
SCAP-202ENST00000320017 SIRPDQ9H106 197 aa10.97□□□□□ -0.65
SCAP-202ENST00000320017 IGHV3-38A0A0C4DH36 116 aa10.96□□□□□ -0.65
SCAP-202ENST00000320017 IGHV4-38-2P0DP08 117 aa10.96□□□□□ -0.66
SCAP-202ENST00000320017 PRO0628Q9UI54 55 aa10.96□□□□□ -0.66
SCAP-202ENST00000320017 TRBV6-5A0A0K0K1A5 114 aa10.96□□□□□ -0.66
SCAP-202ENST00000320017 RBMY1BA6NDE4 496 aaKnown RBP10.96□□□□□ -0.66
SCAP-202ENST00000320017 RBMY1EA6NEQ0 496 aaKnown RBP10.96□□□□□ -0.66
SCAP-202ENST00000320017 RBMY1DP0C7P1 496 aaKnown RBP10.96□□□□□ -0.66
SCAP-202ENST00000320017 RBMY1A1P0DJD3 496 aaKnown RBP10.96□□□□□ -0.66
SCAP-202ENST00000320017 RBMY1CP0DJD4 496 aa10.96□□□□□ -0.66
SCAP-202ENST00000320017 MRPS36P82909 103 aaKnown RBP10.96□□□□□ -0.66
SCAP-202ENST00000320017 RBMY1FQ15415 496 aaKnown RBP10.96□□□□□ -0.66
SCAP-202ENST00000320017 TEX15Q9BXT5 2789 aa10.96□□□□□ -0.66
SCAP-202ENST00000320017 FAM236DA0A1B0GTK5 79 aa10.95□□□□□ -0.66
SCAP-202ENST00000320017 FAM236CP0DP71 79 aa10.95□□□□□ -0.66
SCAP-202ENST00000320017 PIK3CD-AS1Q5SR53 167 aa10.95□□□□□ -0.66
SCAP-202ENST00000320017 LINC01561Q8N1V8 128 aa10.95□□□□□ -0.66
SCAP-202ENST00000320017 H3BUX3 64 aa10.95□□□□□ -0.66
SCAP-202ENST00000320017 UPK3BQ9BT76 320 aa10.95□□□□□ -0.66
SCAP-202ENST00000320017 MINOS1Q5TGZ0 78 aa10.94□□□□□ -0.66
SCAP-202ENST00000320017 MINOS1-NBL1R4GNA1 71 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms