RNA–Protein interactions for RNA: ENST00000318080.6

CRAT-201, Transcript of carnitine O-acetyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRAT, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-201ENST00000318080 IGLV1-40P01703 118 aa11.75□□□□□ -0.53
CRAT-201ENST00000318080 RPL13AP40429 203 aaKnown RBP11.75□□□□□ -0.53
CRAT-201ENST00000318080 C20orf203Q8NBC4 194 aa11.75□□□□□ -0.53
CRAT-201ENST00000318080 FAM104AQ969W3 186 aa11.75□□□□□ -0.53
CRAT-201ENST00000318080 IGLV4-3A0A075B6K6 122 aa11.74□□□□□ -0.53
CRAT-201ENST00000318080 SPANXA1Q9NS26 97 aa11.74□□□□□ -0.53
CRAT-201ENST00000318080 CR1P17927 2039 aa11.74□□□□□ -0.53
CRAT-201ENST00000318080 A0A096LNT2 108 aa11.74□□□□□ -0.53
CRAT-201ENST00000318080 FAM236AA0A1B0GUQ0 79 aa11.74□□□□□ -0.53
CRAT-201ENST00000318080 FAM236BA0A1B0GV22 79 aa11.74□□□□□ -0.53
CRAT-201ENST00000318080 I3L3M4 83 aa11.74□□□□□ -0.53
CRAT-201ENST00000318080 KRTAP1-3Q8IUG1 177 aa11.74□□□□□ -0.53
CRAT-201ENST00000318080 TRGV11A0A075B6L2 103 aa11.73□□□□□ -0.53
CRAT-201ENST00000318080 AVPP01185 164 aa11.73□□□□□ -0.53
CRAT-201ENST00000318080 NSUN5P1Q3KNT7 163 aa11.73□□□□□ -0.53
CRAT-201ENST00000318080 TMEM101Q96IK0 257 aa11.73□□□□□ -0.53
CRAT-201ENST00000318080 OTOGQ6ZRI0 2925 aa11.73□□□□□ -0.53
CRAT-201ENST00000318080 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.73□□□□□ -0.53
CRAT-201ENST00000318080 TRBV30A0A0K0K1B3 111 aa11.73□□□□□ -0.53
CRAT-201ENST00000318080 ZNF625Q96I27 306 aaPredicted RBP11.73□□□□□ -0.53
CRAT-201ENST00000318080 TIMM21Q9BVV7 248 aa11.73□□□□□ -0.53
CRAT-201ENST00000318080 A0A0J9YX75 114 aa11.72□□□□□ -0.53
CRAT-201ENST00000318080 HERVK_113P63121 156 aa11.72□□□□□ -0.53
CRAT-201ENST00000318080 WFDC11Q8NEX6 87 aa11.72□□□□□ -0.53
CRAT-201ENST00000318080 Q96MF0 132 aa11.72□□□□□ -0.53
CRAT-201ENST00000318080 C9orf153Q5TBE3 101 aa11.72□□□□□ -0.53
CRAT-201ENST00000318080 IGHV1OR15-1A0A075B7D0 117 aa11.71□□□□□ -0.54
CRAT-201ENST00000318080 KNCNA6PVL3 124 aa11.71□□□□□ -0.54
CRAT-201ENST00000318080 RS1O15537 224 aa11.71□□□□□ -0.54
CRAT-201ENST00000318080 RBMY1A1P0DJD3 496 aaKnown RBP11.71□□□□□ -0.54
CRAT-201ENST00000318080 RBMY1CP0DJD4 496 aa11.71□□□□□ -0.54
CRAT-201ENST00000318080 CD28P10747 220 aa11.71□□□□□ -0.54
CRAT-201ENST00000318080 RBMY1FQ15415 496 aaKnown RBP11.71□□□□□ -0.54
CRAT-201ENST00000318080 SMCR5Q8TEV8 140 aa11.71□□□□□ -0.54
CRAT-201ENST00000318080 NDUFA12Q9UI09 145 aa11.71□□□□□ -0.54
CRAT-201ENST00000318080 MTORP42345 2549 aa11.7□□□□□ -0.54
CRAT-201ENST00000318080 H3BUA1 57 aa11.7□□□□□ -0.54
CRAT-201ENST00000318080 MSMBP08118 114 aa11.7□□□□□ -0.54
CRAT-201ENST00000318080 CFHR3Q02985 330 aa11.7□□□□□ -0.54
CRAT-201ENST00000318080 RHOHQ15669 191 aa11.7□□□□□ -0.54
CRAT-201ENST00000318080 NDUFA7O95182 113 aa11.69□□□□□ -0.54
CRAT-201ENST00000318080 NF1P21359 2839 aa11.69□□□□□ -0.54
CRAT-201ENST00000318080 F5H768 121 aa11.69□□□□□ -0.54
CRAT-201ENST00000318080 J3KT08 172 aa11.69□□□□□ -0.54
CRAT-201ENST00000318080 SETXQ7Z333 2677 aaKnown RBP11.69□□□□□ -0.54
CRAT-201ENST00000318080 K7EMT4 169 aa11.67□□□□□ -0.54
CRAT-201ENST00000318080 SYNJ2BPP57105 145 aa11.67□□□□□ -0.54
CRAT-201ENST00000318080 Q6ZSN1 163 aa11.67□□□□□ -0.54
CRAT-201ENST00000318080 IGHV3-38A0A0C4DH36 116 aa11.67□□□□□ -0.54
CRAT-201ENST00000318080 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.66□□□□□ -0.54
CRAT-201ENST00000318080 IGKV2-29A2NJV5 120 aaPredicted RBP11.66□□□□□ -0.54
CRAT-201ENST00000318080 K7EQG2 157 aa11.66□□□□□ -0.54
CRAT-201ENST00000318080 LST1O00453 97 aa11.66□□□□□ -0.54
CRAT-201ENST00000318080 PSMB8P28062 276 aa11.66□□□□□ -0.54
CRAT-201ENST00000318080 DSCR9P59020 149 aa11.66□□□□□ -0.54
CRAT-201ENST00000318080 LRRC75A-AS1Q8N1F1 130 aa11.66□□□□□ -0.54
CRAT-201ENST00000318080 B4DSR2 109 aa11.66□□□□□ -0.54
CRAT-201ENST00000318080 COX6CP09669 75 aa11.65□□□□□ -0.54
CRAT-201ENST00000318080 SNRPD3P62318 126 aaKnown RBP11.65□□□□□ -0.54
CRAT-201ENST00000318080 IGHV4-59P01825 116 aa11.65□□□□□ -0.54
CRAT-201ENST00000318080 IGHV4-31P0DP07 118 aa11.64□□□□□ -0.55
CRAT-201ENST00000318080 TMEM61Q8N0U2 210 aa11.64□□□□□ -0.55
CRAT-201ENST00000318080 Q8N2B8 174 aa11.64□□□□□ -0.55
CRAT-201ENST00000318080 OR13C6PQ8NH95 151 aa11.64□□□□□ -0.55
CRAT-201ENST00000318080 F8WDY8 70 aa11.64□□□□□ -0.55
CRAT-201ENST00000318080 MIAQ16674 131 aa11.64□□□□□ -0.55
CRAT-201ENST00000318080 ANK3Q12955 4377 aaKnown RBP11.63□□□□□ -0.55
CRAT-201ENST00000318080 H3BT86 120 aa11.63□□□□□ -0.55
CRAT-201ENST00000318080 C4orf26Q17RF5 130 aa11.63□□□□□ -0.55
CRAT-201ENST00000318080 C3orf22Q8N5N4 141 aa11.63□□□□□ -0.55
CRAT-201ENST00000318080 MRPS36P82909 103 aaKnown RBP11.62□□□□□ -0.55
CRAT-201ENST00000318080 LINC01356Q8N9X3 169 aa11.62□□□□□ -0.55
CRAT-201ENST00000318080 IGHV1-58A0A0C4DH39 117 aa11.62□□□□□ -0.55
CRAT-201ENST00000318080 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.62□□□□□ -0.55
CRAT-201ENST00000318080 HIST2H2BDQ6DRA6 164 aa11.61□□□□□ -0.55
CRAT-201ENST00000318080 HRCT1Q6UXD1 115 aa11.61□□□□□ -0.55
CRAT-201ENST00000318080 VSIG2Q96IQ7 327 aa11.61□□□□□ -0.55
CRAT-201ENST00000318080 CDKN2A-AS1Q9UH64 79 aa11.6□□□□□ -0.55
CRAT-201ENST00000318080 BAHCC1Q9P281 2608 aa11.6□□□□□ -0.55
CRAT-201ENST00000318080 TRBV7-7A0A0K0K1E9 115 aa11.6□□□□□ -0.55
CRAT-201ENST00000318080 DEFB112Q30KQ8 113 aa11.6□□□□□ -0.55
CRAT-201ENST00000318080 CHCHD7Q9BUK0 85 aa11.6□□□□□ -0.55
CRAT-201ENST00000318080 HOXD3P31249 432 aaPredicted RBP11.59□□□□□ -0.55
CRAT-201ENST00000318080 CYSTM1Q9H1C7 97 aa11.59□□□□□ -0.55
CRAT-201ENST00000318080 SETD2Q9BYW2 2564 aaPredicted RBP11.59□□□□□ -0.55
CRAT-201ENST00000318080 Q9HAA7 133 aa11.59□□□□□ -0.55
CRAT-201ENST00000318080 PYGO1Q9Y3Y4 419 aa11.59□□□□□ -0.55
CRAT-201ENST00000318080 RBMY1BA6NDE4 496 aaKnown RBP11.58□□□□□ -0.56
CRAT-201ENST00000318080 RBMY1EA6NEQ0 496 aaKnown RBP11.58□□□□□ -0.56
CRAT-201ENST00000318080 RBMY1DP0C7P1 496 aaKnown RBP11.58□□□□□ -0.56
CRAT-201ENST00000318080 C18orf65Q6ZTR6 163 aa11.58□□□□□ -0.56
CRAT-201ENST00000318080 LINC00467Q9BRT7 94 aa11.58□□□□□ -0.56
CRAT-201ENST00000318080 HIVEP1P15822 2718 aa11.58□□□□□ -0.56
CRAT-201ENST00000318080 A0A1B0GX51 115 aa11.58□□□□□ -0.56
CRAT-201ENST00000318080 DAZ2Q13117 558 aaKnown RBP11.58□□□□□ -0.56
CRAT-201ENST00000318080 DEFB136Q30KP8 78 aa11.58□□□□□ -0.56
CRAT-201ENST00000318080 DAZ4Q86SG3 579 aaKnown RBP11.58□□□□□ -0.56
CRAT-201ENST00000318080 KIR2DL5BQ8NHK3 375 aa11.58□□□□□ -0.56
CRAT-201ENST00000318080 SPANXDQ9BXN6 97 aa11.58□□□□□ -0.56
CRAT-201ENST00000318080 DAZ3Q9NR90 486 aaKnown RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 105.2 ms