RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 SYCNQ0VAF6 134 aa2.54□□□□□ -2
SMCO3-201ENST00000316048 LCE3EQ5T5B0 92 aa2.54□□□□□ -2
SMCO3-201ENST00000316048 PRR9Q5T870 116 aa2.54□□□□□ -2
SMCO3-201ENST00000316048 ZFP2Q6ZN57 461 aa2.54□□□□□ -2
SMCO3-201ENST00000316048 ZNF664Q8N3J9 261 aa2.54□□□□□ -2
SMCO3-201ENST00000316048 MRAP2Q96G30 205 aa2.54□□□□□ -2
SMCO3-201ENST00000316048 TMEM70Q9BUB7 260 aa2.54□□□□□ -2
SMCO3-201ENST00000316048 PRO1933Q9H354 126 aa2.54□□□□□ -2
SMCO3-201ENST00000316048 NXT2Q9NPJ8 142 aaKnown RBP2.54□□□□□ -2
SMCO3-201ENST00000316048 TP53TG1Q9Y2A0 90 aa2.54□□□□□ -2
SMCO3-201ENST00000316048 TIMM8BQ9Y5J9 83 aaPredicted RBP2.54□□□□□ -2
SMCO3-201ENST00000316048 A0A087WX48 190 aa2.54□□□□□ -2
SMCO3-201ENST00000316048 TRAV12-3A0A0B4J271 114 aa2.54□□□□□ -2
SMCO3-201ENST00000316048 IGHV1-24A0A0C4DH33 117 aa2.54□□□□□ -2
SMCO3-201ENST00000316048 NDUFC2-KCTD14E9PQ53 114 aa2.54□□□□□ -2
SMCO3-201ENST00000316048 M0R381 172 aa2.54□□□□□ -2
SMCO3-201ENST00000316048 GNRH2O43555 120 aa2.54□□□□□ -2
SMCO3-201ENST00000316048 CD7P09564 240 aa2.54□□□□□ -2
SMCO3-201ENST00000316048 SMIM17P0DL12 118 aa2.54□□□□□ -2
SMCO3-201ENST00000316048 CD28P10747 220 aa2.54□□□□□ -2
SMCO3-201ENST00000316048 DEFB131AP59861 70 aa2.54□□□□□ -2
SMCO3-201ENST00000316048 DEFB116Q30KQ4 102 aa2.54□□□□□ -2
SMCO3-201ENST00000316048 DEFB114Q30KQ6 69 aa2.54□□□□□ -2
SMCO3-201ENST00000316048 TDRG1Q3Y452 100 aa2.54□□□□□ -2
SMCO3-201ENST00000316048 FAM19A5Q7Z5A7 132 aaPredicted RBP2.54□□□□□ -2
SMCO3-201ENST00000316048 MRPL52Q86TS9 123 aaKnown RBP2.54□□□□□ -2
SMCO3-201ENST00000316048 TMEM243Q9BU79 118 aa2.54□□□□□ -2
SMCO3-201ENST00000316048 DPH3P1Q9H4G8 78 aa2.54□□□□□ -2
SMCO3-201ENST00000316048 PRO0628Q9UI54 55 aa2.54□□□□□ -2
SMCO3-201ENST00000316048 IGHV3OR16-9A0A0B4J2B5 98 aa2.53□□□□□ -2
SMCO3-201ENST00000316048 SYS1-DBNDD2H3BUS1 97 aa2.53□□□□□ -2
SMCO3-201ENST00000316048 CRXO43186 299 aaPredicted RBP2.53□□□□□ -2
SMCO3-201ENST00000316048 NPYP01303 97 aa2.53□□□□□ -2
SMCO3-201ENST00000316048 HBDP02042 147 aa2.53□□□□□ -2
SMCO3-201ENST00000316048 ZNF705AQ6ZN79 300 aaPredicted RBP2.53□□□□□ -2
SMCO3-201ENST00000316048 Q6ZQT7 251 aa2.53□□□□□ -2
SMCO3-201ENST00000316048 NTM-AS1Q6ZSK4 140 aa2.53□□□□□ -2
SMCO3-201ENST00000316048 OR2K2Q8NGT1 345 aa2.53□□□□□ -2
SMCO3-201ENST00000316048 FAM104AQ969W3 186 aa2.53□□□□□ -2
SMCO3-201ENST00000316048 AP1S3Q96PC3 154 aa2.53□□□□□ -2
SMCO3-201ENST00000316048 C20orf144Q9BQM9 153 aa2.53□□□□□ -2
SMCO3-201ENST00000316048 COL12A1Q99715 3063 aa2.53□□□□□ -2
SMCO3-201ENST00000316048 UTP20O75691 2785 aaKnown RBP2.53□□□□□ -2
SMCO3-201ENST00000316048 ZFYVE26Q68DK2 2539 aa2.53□□□□□ -2
SMCO3-201ENST00000316048 TRAV12-2A0A075B6T6 113 aa2.53□□□□□ -2.01
SMCO3-201ENST00000316048 LINC01546A6NGU7 62 aa2.53□□□□□ -2.01
SMCO3-201ENST00000316048 H3BMM0 161 aa2.53□□□□□ -2.01
SMCO3-201ENST00000316048 K7EMI3 77 aa2.53□□□□□ -2.01
SMCO3-201ENST00000316048 NCR2O95944 276 aa2.53□□□□□ -2.01
SMCO3-201ENST00000316048 RNASE3P12724 160 aaKnown RBP2.53□□□□□ -2.01
SMCO3-201ENST00000316048 HLA-DRB4P13762 266 aa2.53□□□□□ -2.01
SMCO3-201ENST00000316048 FCER1GP30273 86 aa2.53□□□□□ -2.01
SMCO3-201ENST00000316048 CD164Q04900 197 aa2.53□□□□□ -2.01
SMCO3-201ENST00000316048 SPINK13Q1W4C9 94 aa2.53□□□□□ -2.01
SMCO3-201ENST00000316048 SPATA45Q537H7 98 aa2.53□□□□□ -2.01
SMCO3-201ENST00000316048 TMEM97Q5BJF2 176 aa2.53□□□□□ -2.01
SMCO3-201ENST00000316048 SPATA12Q7Z6I5 190 aa2.53□□□□□ -2.01
SMCO3-201ENST00000316048 DEFB125Q8N687 156 aa2.53□□□□□ -2.01
SMCO3-201ENST00000316048 Q8N8P6 123 aa2.53□□□□□ -2.01
SMCO3-201ENST00000316048 C20orf78Q9BR46 151 aa2.53□□□□□ -2.01
SMCO3-201ENST00000316048 MIEN1Q9BRT3 115 aa2.53□□□□□ -2.01
SMCO3-201ENST00000316048 HLA-DRB4X5D2U9 266 aa2.53□□□□□ -2.01
SMCO3-201ENST00000316048 EPG5Q9HCE0 2579 aa2.52□□□□□ -2.01
SMCO3-201ENST00000316048 FBN2P35556 2912 aa2.52□□□□□ -2.01
SMCO3-201ENST00000316048 CSPG4Q6UVK1 2322 aa2.52□□□□□ -2.01
SMCO3-201ENST00000316048 KNCNA6PVL3 124 aa2.52□□□□□ -2.01
SMCO3-201ENST00000316048 CRYGDP07320 174 aa2.52□□□□□ -2.01
SMCO3-201ENST00000316048 MGPP08493 103 aa2.52□□□□□ -2.01
SMCO3-201ENST00000316048 OCIAD2Q56VL3 154 aa2.52□□□□□ -2.01
SMCO3-201ENST00000316048 AMTNQ6UX39 209 aa2.52□□□□□ -2.01
SMCO3-201ENST00000316048 SMR3AQ99954 134 aa2.52□□□□□ -2.01
SMCO3-201ENST00000316048 USP9YO00507 2555 aaPredicted RBP2.52□□□□□ -2.01
SMCO3-201ENST00000316048 NAV2Q8IVL1 2488 aa2.52□□□□□ -2.01
SMCO3-201ENST00000316048 KMT2BQ9UMN6 2715 aaPredicted RBP2.52□□□□□ -2.01
SMCO3-201ENST00000316048 LRRK2Q5S007 2527 aa2.51□□□□□ -2.01
SMCO3-201ENST00000316048 LINC01549A6NIU2 74 aa2.51□□□□□ -2.01
SMCO3-201ENST00000316048 A8MTW9 85 aa2.51□□□□□ -2.01
SMCO3-201ENST00000316048 LINC01545Q5VT33 79 aa2.51□□□□□ -2.01
SMCO3-201ENST00000316048 NDUFA11Q86Y39 141 aa2.51□□□□□ -2.01
SMCO3-201ENST00000316048 IFI27L1Q96BM0 104 aa2.51□□□□□ -2.01
SMCO3-201ENST00000316048 LINC01587Q99440 93 aa2.51□□□□□ -2.01
SMCO3-201ENST00000316048 UQCR10Q9UDW1 63 aa2.51□□□□□ -2.01
SMCO3-201ENST00000316048 UNC79Q9P2D8 2635 aa2.51□□□□□ -2.01
SMCO3-201ENST00000316048 DOPEY2Q9Y3R5 2298 aa2.51□□□□□ -2.01
SMCO3-201ENST00000316048 TRAV26-2A0A0B4J265 109 aa2.51□□□□□ -2.01
SMCO3-201ENST00000316048 A0A0U1RQV1 116 aa2.51□□□□□ -2.01
SMCO3-201ENST00000316048 M0R143 59 aa2.51□□□□□ -2.01
SMCO3-201ENST00000316048 HTN1P15515 57 aa2.51□□□□□ -2.01
SMCO3-201ENST00000316048 FXYD7P58549 80 aa2.51□□□□□ -2.01
SMCO3-201ENST00000316048 KRTAP10-7P60409 375 aaPredicted RBP2.51□□□□□ -2.01
SMCO3-201ENST00000316048 LGALS9BQ3B8N2 356 aa2.51□□□□□ -2.01
SMCO3-201ENST00000316048 LGALS9CQ6DKI2 356 aa2.51□□□□□ -2.01
SMCO3-201ENST00000316048 ATOH7Q8N100 152 aa2.51□□□□□ -2.01
SMCO3-201ENST00000316048 DNAJC30Q96LL9 226 aa2.51□□□□□ -2.01
SMCO3-201ENST00000316048 C18orf15Q96N68 181 aa2.51□□□□□ -2.01
SMCO3-201ENST00000316048 CAMK2N2Q96S95 79 aa2.51□□□□□ -2.01
SMCO3-201ENST00000316048 LINC00467Q9BRT7 94 aa2.51□□□□□ -2.01
SMCO3-201ENST00000316048 SMIM2Q9BVW6 85 aa2.51□□□□□ -2.01
SMCO3-201ENST00000316048 ST20Q9HBF5 79 aa2.51□□□□□ -2.01
SMCO3-201ENST00000316048 CRYBG3Q68DQ2 2970 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms