RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 Q6ZUT4 128 aa15□□□□□ -0.01
ATG4D-201ENST00000309469 GCSHP23434 173 aa15□□□□□ -0.01
ATG4D-201ENST00000309469 DGAT2L7PQ6IED9 249 aa15□□□□□ -0.01
ATG4D-201ENST00000309469 SBSPONQ8IVN8 264 aa15□□□□□ -0.01
ATG4D-201ENST00000309469 RNF183Q96D59 192 aa15□□□□□ -0.01
ATG4D-201ENST00000309469 DEFB4AO15263 64 aa14.99□□□□□ -0.01
ATG4D-201ENST00000309469 CCL25O15444 150 aa14.99□□□□□ -0.01
ATG4D-201ENST00000309469 MIFP14174 115 aa14.99□□□□□ -0.01
ATG4D-201ENST00000309469 EGFEM1PQ0D2K5 195 aa14.99□□□□□ -0.01
ATG4D-201ENST00000309469 LINC00694P0DN24 101 aa14.98□□□□□ -0.01
ATG4D-201ENST00000309469 ZNF22P17026 224 aaPredicted RBP14.98□□□□□ -0.01
ATG4D-201ENST00000309469 ZNF815PA8K554 130 aa14.98□□□□□ -0.01
ATG4D-201ENST00000309469 TAL2Q16559 108 aa14.98□□□□□ -0.01
ATG4D-201ENST00000309469 TMEM223A0PJW6 202 aa14.97□□□□□ -0.01
ATG4D-201ENST00000309469 CEND1Q8N111 149 aa14.97□□□□□ -0.01
ATG4D-201ENST00000309469 Q8NAQ8 132 aa14.97□□□□□ -0.01
ATG4D-201ENST00000309469 TMEM243Q9BU79 118 aa14.96□□□□□ -0.01
ATG4D-201ENST00000309469 CBY1Q9Y3M2 126 aa14.96□□□□□ -0.01
ATG4D-201ENST00000309469 CSDC2Q9Y534 153 aaKnown RBP14.96□□□□□ -0.01
ATG4D-201ENST00000309469 H3BRM9 83 aa14.96□□□□□ -0.02
ATG4D-201ENST00000309469 FXYD2P54710 66 aa14.96□□□□□ -0.02
ATG4D-201ENST00000309469 TM2D2Q9BX73 214 aa14.96□□□□□ -0.02
ATG4D-201ENST00000309469 K7EP13 123 aa14.95□□□□□ -0.02
ATG4D-201ENST00000309469 TINCRA0A1B0GVN0 87 aa14.94□□□□□ -0.02
ATG4D-201ENST00000309469 SMAGPQ0VAQ4 97 aa14.94□□□□□ -0.02
ATG4D-201ENST00000309469 VAMP3Q15836 100 aa14.94□□□□□ -0.02
ATG4D-201ENST00000309469 HIST1H4GQ99525 98 aa14.94□□□□□ -0.02
ATG4D-201ENST00000309469 PRO0255Q9UI72 69 aa14.94□□□□□ -0.02
ATG4D-201ENST00000309469 UBE2L6O14933 153 aa14.93□□□□□ -0.02
ATG4D-201ENST00000309469 UBE2D1P51668 147 aa14.93□□□□□ -0.02
ATG4D-201ENST00000309469 SCGB1D4Q6XE38 83 aa14.93□□□□□ -0.02
ATG4D-201ENST00000309469 NBEAL2Q6ZNJ1 2754 aa14.93□□□□□ -0.02
ATG4D-201ENST00000309469 A8MZ25 164 aa14.92□□□□□ -0.02
ATG4D-201ENST00000309469 LEPROTO15243 131 aa14.92□□□□□ -0.02
ATG4D-201ENST00000309469 GYPEP15421 78 aa14.92□□□□□ -0.02
ATG4D-201ENST00000309469 TSPEAR-AS2P59090 65 aa14.92□□□□□ -0.02
ATG4D-201ENST00000309469 H7C423 109 aa14.92□□□□□ -0.02
ATG4D-201ENST00000309469 DAD1P61803 113 aa14.92□□□□□ -0.02
ATG4D-201ENST00000309469 TRBV6-8A0A0A6YYG3 113 aa14.91□□□□□ -0.02
ATG4D-201ENST00000309469 J3QQQ9 107 aa14.91□□□□□ -0.02
ATG4D-201ENST00000309469 AMMECR1LQ6DCA0 310 aa14.91□□□□□ -0.02
ATG4D-201ENST00000309469 OR5A1Q8NGJ0 315 aa14.91□□□□□ -0.02
ATG4D-201ENST00000309469 C9orf118A6NHY6 69 aa14.9□□□□□ -0.02
ATG4D-201ENST00000309469 SMIM13P0DJ93 91 aa14.9□□□□□ -0.02
ATG4D-201ENST00000309469 PLEKHB2Q96CS7 222 aa14.9□□□□□ -0.02
ATG4D-201ENST00000309469 CDC42SE2Q9NRR3 84 aa14.9□□□□□ -0.02
ATG4D-201ENST00000309469 CELA1Q9UNI1 258 aa14.9□□□□□ -0.02
ATG4D-201ENST00000309469 SPART-AS1P0CW21 52 aa14.9□□□□□ -0.02
ATG4D-201ENST00000309469 LGALS3P17931 250 aaKnown RBP14.9□□□□□ -0.02
ATG4D-201ENST00000309469 ATP6V0E2Q8NHE4 81 aa14.89□□□□□ -0.03
ATG4D-201ENST00000309469 RAB37Q96AX2 223 aa14.89□□□□□ -0.03
ATG4D-201ENST00000309469 TMEM101Q96IK0 257 aa14.89□□□□□ -0.03
ATG4D-201ENST00000309469 GEMIN7Q9H840 131 aaKnown RBP14.89□□□□□ -0.03
ATG4D-201ENST00000309469 IGHV3-64A0A075B6Q5 118 aa14.88□□□□□ -0.03
ATG4D-201ENST00000309469 PAX4O43316 350 aa14.88□□□□□ -0.03
ATG4D-201ENST00000309469 TIRAPP58753 221 aa14.88□□□□□ -0.03
ATG4D-201ENST00000309469 G3V4G9 280 aa14.88□□□□□ -0.03
ATG4D-201ENST00000309469 NHP2Q9NX24 153 aaKnown RBP14.88□□□□□ -0.03
ATG4D-201ENST00000309469 STAB1Q9NY15 2570 aa14.87□□□□□ -0.03
ATG4D-201ENST00000309469 ATP5G1P05496 136 aa14.86□□□□□ -0.03
ATG4D-201ENST00000309469 GAGE6Q13070 117 aa14.86□□□□□ -0.03
ATG4D-201ENST00000309469 H3BUT2 72 aa14.86□□□□□ -0.03
ATG4D-201ENST00000309469 FAM19A3Q7Z5A8 133 aa14.86□□□□□ -0.03
ATG4D-201ENST00000309469 A0A0J9YY99 117 aa14.85□□□□□ -0.03
ATG4D-201ENST00000309469 CHCHD5Q9BSY4 110 aa14.85□□□□□ -0.03
ATG4D-201ENST00000309469 IGLV5-45A0A087WSX0 123 aa14.84□□□□□ -0.03
ATG4D-201ENST00000309469 IGHV1-58A0A0C4DH39 117 aa14.84□□□□□ -0.03
ATG4D-201ENST00000309469 K7ERJ3 54 aa14.84□□□□□ -0.03
ATG4D-201ENST00000309469 IGHV3-30-3P0DP02 117 aa14.84□□□□□ -0.03
ATG4D-201ENST00000309469 LINC00242Q5T6M2 205 aa14.84□□□□□ -0.03
ATG4D-201ENST00000309469 VSIG2Q96IQ7 327 aa14.84□□□□□ -0.03
ATG4D-201ENST00000309469 TRAV8-3A0A0A6YYJ7 113 aa14.84□□□□□ -0.03
ATG4D-201ENST00000309469 COX6A2Q02221 97 aa14.84□□□□□ -0.03
ATG4D-201ENST00000309469 SRSF9Q13242 221 aaKnown RBP eCLIP14.84□□□□□ -0.03
ATG4D-201ENST00000309469 CDKN2A-AS1Q9UH64 79 aa14.84□□□□□ -0.03
ATG4D-201ENST00000309469 TRAV13-1A0A0B4J241 112 aa14.83□□□□□ -0.04
ATG4D-201ENST00000309469 HERVK_113P63121 156 aa14.83□□□□□ -0.04
ATG4D-201ENST00000309469 NAA38Q9BRA0 125 aaKnown RBP14.83□□□□□ -0.04
ATG4D-201ENST00000309469 SPINK8P0C7L1 97 aa14.82□□□□□ -0.04
ATG4D-201ENST00000309469 RETNQ9HD89 108 aa14.82□□□□□ -0.04
ATG4D-201ENST00000309469 F5H768 121 aa14.81□□□□□ -0.04
ATG4D-201ENST00000309469 C12orf74Q32Q52 190 aa14.81□□□□□ -0.04
ATG4D-201ENST00000309469 SAMD5Q5TGI4 173 aa14.81□□□□□ -0.04
ATG4D-201ENST00000309469 SPANXB1Q9NS25 103 aaPredicted RBP14.81□□□□□ -0.04
ATG4D-201ENST00000309469 A0A096LPF7 62 aa14.8□□□□□ -0.04
ATG4D-201ENST00000309469 TEX48A0A1B0GUV7 120 aa14.8□□□□□ -0.04
ATG4D-201ENST00000309469 TRAV26-1A0A087WT03 109 aa14.8□□□□□ -0.04
ATG4D-201ENST00000309469 RBX1P62877 108 aa14.8□□□□□ -0.04
ATG4D-201ENST00000309469 IGLV4-60A0A075B6I1 120 aa14.79□□□□□ -0.04
ATG4D-201ENST00000309469 MAST4O15021 2626 aa14.79□□□□□ -0.04
ATG4D-201ENST00000309469 PKD1L1Q8TDX9 2849 aa14.79□□□□□ -0.04
ATG4D-201ENST00000309469 TMEM238LA0A1B0GVL6 79 aa14.78□□□□□ -0.04
ATG4D-201ENST00000309469 A0A1W2PPM0 123 aa14.78□□□□□ -0.04
ATG4D-201ENST00000309469 A6NJY4 79 aa14.78□□□□□ -0.04
ATG4D-201ENST00000309469 HTN3P15516 51 aa14.78□□□□□ -0.04
ATG4D-201ENST00000309469 A0A1B0GWB2 263 aa14.78□□□□□ -0.04
ATG4D-201ENST00000309469 GAGE10A6NGK3 116 aa14.78□□□□□ -0.04
ATG4D-201ENST00000309469 CMYA5Q8N3K9 4069 aa14.78□□□□□ -0.04
ATG4D-201ENST00000309469 GTF2H5Q6ZYL4 71 aa14.76□□□□□ -0.05
ATG4D-201ENST00000309469 C10orf126Q8N4M7 172 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms