RNA–Protein interactions for RNA: ENST00000307106.3

SMIM4-201, Transcript of small integral membrane protein 4, humanhuman

TSL 2 BASIC

Gene SMIM4, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-201ENST00000307106 LYZL1Q6UWQ5 148 aa6.92□□□□□ -1.3
SMIM4-201ENST00000307106 TYMSOSQ8TAI1 123 aa6.92□□□□□ -1.3
SMIM4-201ENST00000307106 SDHAF1A6NFY7 115 aa6.91□□□□□ -1.3
SMIM4-201ENST00000307106 M0QXV9 152 aa6.91□□□□□ -1.3
SMIM4-201ENST00000307106 PFDN1O60925 122 aa6.91□□□□□ -1.3
SMIM4-201ENST00000307106 SPAG11BQ08648 103 aa6.91□□□□□ -1.3
SMIM4-201ENST00000307106 TMUB2Q71RG4 321 aa6.91□□□□□ -1.3
SMIM4-201ENST00000307106 IMMP2LQ96T52 175 aa6.91□□□□□ -1.3
SMIM4-201ENST00000307106 C1orf196B1AJZ1 125 aa6.9□□□□□ -1.3
SMIM4-201ENST00000307106 G3V3Q6 166 aa6.9□□□□□ -1.3
SMIM4-201ENST00000307106 I3L3M4 83 aa6.9□□□□□ -1.3
SMIM4-201ENST00000307106 ZNF861PO60384 105 aa6.9□□□□□ -1.3
SMIM4-201ENST00000307106 PMCHP20382 165 aa6.9□□□□□ -1.3
SMIM4-201ENST00000307106 KRTAP7-1Q8IUC3 87 aa6.9□□□□□ -1.3
SMIM4-201ENST00000307106 MRAP2Q96G30 205 aa6.9□□□□□ -1.3
SMIM4-201ENST00000307106 FAM210AQ96ND0 272 aa6.9□□□□□ -1.3
SMIM4-201ENST00000307106 MRPL35Q9NZE8 188 aaKnown RBP6.9□□□□□ -1.3
SMIM4-201ENST00000307106 IGLV7-46A0A075B6I9 117 aa6.89□□□□□ -1.31
SMIM4-201ENST00000307106 XKRY2A2RUG3 117 aa6.89□□□□□ -1.31
SMIM4-201ENST00000307106 CRYGAP11844 174 aa6.89□□□□□ -1.31
SMIM4-201ENST00000307106 RPL35P42766 123 aaKnown RBP6.89□□□□□ -1.31
SMIM4-201ENST00000307106 TWIST1Q15672 202 aa6.89□□□□□ -1.31
SMIM4-201ENST00000307106 C5orf38Q86SI9 138 aa6.89□□□□□ -1.31
SMIM4-201ENST00000307106 MRPL52Q86TS9 123 aaKnown RBP6.89□□□□□ -1.31
SMIM4-201ENST00000307106 UPK1BO75841 260 aa6.88□□□□□ -1.31
SMIM4-201ENST00000307106 IFNA1P01562 189 aa6.88□□□□□ -1.31
SMIM4-201ENST00000307106 TLX1NBP0CAT3 122 aa6.88□□□□□ -1.31
SMIM4-201ENST00000307106 GAGE2EQ4V326 116 aa6.88□□□□□ -1.31
SMIM4-201ENST00000307106 GAGE2DQ9UEU5 116 aa6.88□□□□□ -1.31
SMIM4-201ENST00000307106 A0A1B0GV50 99 aa6.87□□□□□ -1.31
SMIM4-201ENST00000307106 TSHBP01222 138 aa6.87□□□□□ -1.31
SMIM4-201ENST00000307106 CTRLP40313 264 aa6.87□□□□□ -1.31
SMIM4-201ENST00000307106 CENPWQ5EE01 88 aa6.87□□□□□ -1.31
SMIM4-201ENST00000307106 C9orf62Q8N4C0 152 aa6.87□□□□□ -1.31
SMIM4-201ENST00000307106 OR10D4PQ8NGN7 298 aa6.87□□□□□ -1.31
SMIM4-201ENST00000307106 TMEM242Q9NWH2 141 aa6.87□□□□□ -1.31
SMIM4-201ENST00000307106 ALG5Q9Y673 324 aa6.87□□□□□ -1.31
SMIM4-201ENST00000307106 TRAV13-1A0A0B4J241 112 aa6.86□□□□□ -1.31
SMIM4-201ENST00000307106 NDUFA1O15239 70 aa6.86□□□□□ -1.31
SMIM4-201ENST00000307106 IFITM3Q01628 133 aa6.86□□□□□ -1.31
SMIM4-201ENST00000307106 Q5BKY6 102 aa6.86□□□□□ -1.31
SMIM4-201ENST00000307106 C10orf25Q5T742 122 aa6.86□□□□□ -1.31
SMIM4-201ENST00000307106 TEX261Q6UWH6 196 aa6.86□□□□□ -1.31
SMIM4-201ENST00000307106 LINC00173Q6ZV60 143 aa6.86□□□□□ -1.31
SMIM4-201ENST00000307106 SMDT1Q9H4I9 107 aa6.86□□□□□ -1.31
SMIM4-201ENST00000307106 C7orf77A4D0Y5 90 aa6.85□□□□□ -1.31
SMIM4-201ENST00000307106 F8WDY8 70 aa6.85□□□□□ -1.31
SMIM4-201ENST00000307106 TMEM241Q24JQ0 296 aa6.85□□□□□ -1.31
SMIM4-201ENST00000307106 RNASE13Q5GAN3 156 aaKnown RBP6.85□□□□□ -1.31
SMIM4-201ENST00000307106 ORAOV1Q8WV07 137 aa6.85□□□□□ -1.31
SMIM4-201ENST00000307106 SFT2D1Q8WV19 159 aa6.85□□□□□ -1.31
SMIM4-201ENST00000307106 S100ZQ8WXG8 99 aa6.85□□□□□ -1.31
SMIM4-201ENST00000307106 CNFNQ9BYD5 112 aa6.85□□□□□ -1.31
SMIM4-201ENST00000307106 C6orf48Q9UBA6 75 aa6.85□□□□□ -1.31
SMIM4-201ENST00000307106 TRBV6-5A0A0K0K1A5 114 aa6.84□□□□□ -1.31
SMIM4-201ENST00000307106 UNQ6190/PRO20217Q6UXQ8 127 aa6.84□□□□□ -1.31
SMIM4-201ENST00000307106 LINC00299Q6ZSB3 139 aa6.84□□□□□ -1.31
SMIM4-201ENST00000307106 KCNRGQ8N5I3 272 aa6.84□□□□□ -1.31
SMIM4-201ENST00000307106 RNASE7Q9H1E1 156 aaKnown RBP6.84□□□□□ -1.31
SMIM4-201ENST00000307106 NUPR1O60356 82 aa6.83□□□□□ -1.32
SMIM4-201ENST00000307106 FOXA3P55318 350 aaPredicted RBP6.83□□□□□ -1.32
SMIM4-201ENST00000307106 SMIM15Q7Z3B0 74 aa6.83□□□□□ -1.32
SMIM4-201ENST00000307106 LINC00304Q8N9R0 145 aa6.83□□□□□ -1.32
SMIM4-201ENST00000307106 PPDPFQ9H3Y8 114 aa6.83□□□□□ -1.32
SMIM4-201ENST00000307106 ST20Q9HBF5 79 aa6.83□□□□□ -1.32
SMIM4-201ENST00000307106 FXYD6-FXYD2A0A087WZ82 144 aa6.82□□□□□ -1.32
SMIM4-201ENST00000307106 CTAG1AP78358 180 aa6.82□□□□□ -1.32
SMIM4-201ENST00000307106 KRTAP13-2Q52LG2 175 aa6.82□□□□□ -1.32
SMIM4-201ENST00000307106 FAM213BQ8TBF2 198 aa6.82□□□□□ -1.32
SMIM4-201ENST00000307106 MBD3L1Q8WWY6 194 aa6.82□□□□□ -1.32
SMIM4-201ENST00000307106 C11orf52Q96A22 123 aa6.82□□□□□ -1.32
SMIM4-201ENST00000307106 SMIM12Q96EX1 92 aa6.82□□□□□ -1.32
SMIM4-201ENST00000307106 CTDSP1Q9GZU7 261 aa6.82□□□□□ -1.32
SMIM4-201ENST00000307106 CSDC2Q9Y534 153 aaKnown RBP6.82□□□□□ -1.32
SMIM4-201ENST00000307106 RAB19A4D1S5 217 aa6.81□□□□□ -1.32
SMIM4-201ENST00000307106 GNG4P50150 75 aa6.81□□□□□ -1.32
SMIM4-201ENST00000307106 C9orf129Q5T035 196 aaKnown RBP6.81□□□□□ -1.32
SMIM4-201ENST00000307106 KRTAP4-1Q9BYQ7 146 aa6.81□□□□□ -1.32
SMIM4-201ENST00000307106 ANAPC11Q9NYG5 84 aa6.81□□□□□ -1.32
SMIM4-201ENST00000307106 UBE2D4Q9Y2X8 147 aa6.81□□□□□ -1.32
SMIM4-201ENST00000307106 RPL28P46779 137 aaKnown RBP6.8□□□□□ -1.32
SMIM4-201ENST00000307106 CCL20P78556 96 aa6.8□□□□□ -1.32
SMIM4-201ENST00000307106 SMAGPQ0VAQ4 97 aa6.8□□□□□ -1.32
SMIM4-201ENST00000307106 ASB16-AS1Q495Z4 193 aa6.8□□□□□ -1.32
SMIM4-201ENST00000307106 Q6ZUT4 128 aa6.8□□□□□ -1.32
SMIM4-201ENST00000307106 NUDT10Q8NFP7 164 aa6.8□□□□□ -1.32
SMIM4-201ENST00000307106 NUDT11Q96G61 164 aa6.8□□□□□ -1.32
SMIM4-201ENST00000307106 CYTL1Q9NRR1 136 aa6.8□□□□□ -1.32
SMIM4-201ENST00000307106 TRBV27A0A0K0K1C4 114 aa6.79□□□□□ -1.32
SMIM4-201ENST00000307106 POLR2KP53803 58 aaKnown RBP6.79□□□□□ -1.32
SMIM4-201ENST00000307106 BIN3Q9NQY0 253 aa6.79□□□□□ -1.32
SMIM4-201ENST00000307106 KRTAP9-7A8MTY7 169 aa6.78□□□□□ -1.32
SMIM4-201ENST00000307106 NDUFC2-KCTD14E9PQ53 114 aa6.78□□□□□ -1.32
SMIM4-201ENST00000307106 TRBV20OR9-2A0A075B6H5 130 aa6.77□□□□□ -1.33
SMIM4-201ENST00000307106 IGHV3OR16-9A0A0B4J2B5 98 aa6.77□□□□□ -1.33
SMIM4-201ENST00000307106 GIPP09681 153 aaPredicted RBP6.77□□□□□ -1.33
SMIM4-201ENST00000307106 FCER1GP30273 86 aa6.77□□□□□ -1.33
SMIM4-201ENST00000307106 LINC00337Q8N6G1 96 aa6.77□□□□□ -1.33
SMIM4-201ENST00000307106 GNG13Q9P2W3 67 aa6.77□□□□□ -1.33
SMIM4-201ENST00000307106 C22orf24Q9Y442 160 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms