RNA–Protein interactions for RNA: ENST00000301364.9

TSR1-201, Transcript of TSR1, ribosome maturation factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSR1, Length 5,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-201ENST00000301364 F8W735 103 aaPredicted RBP14.28□□□□□ -0.12
TSR1-201ENST00000301364 C14orf132Q9NPU4 83 aa14.28□□□□□ -0.12
TSR1-201ENST00000301364 PIK3CD-AS1Q5SR53 167 aa14.28□□□□□ -0.12
TSR1-201ENST00000301364 RNF183Q96D59 192 aa14.28□□□□□ -0.12
TSR1-201ENST00000301364 IGIPA6NJ69 53 aa14.27□□□□□ -0.12
TSR1-201ENST00000301364 DEFB4AO15263 64 aa14.27□□□□□ -0.12
TSR1-201ENST00000301364 UBE2BP63146 152 aa14.27□□□□□ -0.12
TSR1-201ENST00000301364 ZNF702PQ9H963 129 aa14.27□□□□□ -0.13
TSR1-201ENST00000301364 CRIP2P52943 208 aaPredicted RBP14.27□□□□□ -0.13
TSR1-201ENST00000301364 CCL18P55774 89 aa14.27□□□□□ -0.13
TSR1-201ENST00000301364 NREPQ16612 68 aa14.27□□□□□ -0.13
TSR1-201ENST00000301364 Q6ZSV7 163 aa14.27□□□□□ -0.13
TSR1-201ENST00000301364 GOLGB1Q14789 3259 aaKnown RBP14.26□□□□□ -0.13
TSR1-201ENST00000301364 CDSNQ15517 529 aa14.26□□□□□ -0.13
TSR1-201ENST00000301364 LYRM9A8MSI8 78 aa14.25□□□□□ -0.13
TSR1-201ENST00000301364 CCDC168Q8NDH2 2452 aa14.25□□□□□ -0.13
TSR1-201ENST00000301364 TRBV6-8A0A0A6YYG3 113 aa14.25□□□□□ -0.13
TSR1-201ENST00000301364 MRPS36P82909 103 aaKnown RBP14.25□□□□□ -0.13
TSR1-201ENST00000301364 UFSP1Q6NVU6 142 aa14.25□□□□□ -0.13
TSR1-201ENST00000301364 TMEM258P61165 79 aa14.25□□□□□ -0.13
TSR1-201ENST00000301364 Q6ZS46 218 aa14.24□□□□□ -0.13
TSR1-201ENST00000301364 CENPFP49454 3210 aa14.24□□□□□ -0.13
TSR1-201ENST00000301364 A0A096LNJ9 63 aa14.24□□□□□ -0.13
TSR1-201ENST00000301364 UBE2D4Q9Y2X8 147 aa14.24□□□□□ -0.13
TSR1-201ENST00000301364 SPATA25Q9BR10 227 aa14.24□□□□□ -0.13
TSR1-201ENST00000301364 REG3AQ06141 175 aa14.24□□□□□ -0.13
TSR1-201ENST00000301364 LINC00269Q8N2A0 174 aa14.24□□□□□ -0.13
TSR1-201ENST00000301364 PKIGQ9Y2B9 76 aa14.24□□□□□ -0.13
TSR1-201ENST00000301364 J3KT08 172 aa14.23□□□□□ -0.13
TSR1-201ENST00000301364 FAM222AQ5U5X8 452 aa14.23□□□□□ -0.13
TSR1-201ENST00000301364 MYO18BQ8IUG5 2567 aa14.22□□□□□ -0.13
TSR1-201ENST00000301364 BRI3O95415 125 aa14.21□□□□□ -0.13
TSR1-201ENST00000301364 MRGPRG-AS1Q2M3A8 158 aa14.21□□□□□ -0.14
TSR1-201ENST00000301364 LST1O00453 97 aa14.2□□□□□ -0.14
TSR1-201ENST00000301364 COX7BP24311 80 aa14.2□□□□□ -0.14
TSR1-201ENST00000301364 CHCHD10Q8WYQ3 142 aaPredicted RBP14.2□□□□□ -0.14
TSR1-201ENST00000301364 A8MZ25 164 aa14.2□□□□□ -0.14
TSR1-201ENST00000301364 HIVEP3Q5T1R4 2406 aa14.19□□□□□ -0.14
TSR1-201ENST00000301364 UBE2D1P51668 147 aa14.18□□□□□ -0.14
TSR1-201ENST00000301364 HIGD2BQ4VC39 106 aa14.18□□□□□ -0.14
TSR1-201ENST00000301364 WFDC11Q8NEX6 87 aa14.18□□□□□ -0.14
TSR1-201ENST00000301364 UQCRQO14949 82 aa14.17□□□□□ -0.14
TSR1-201ENST00000301364 MRAPQ8TCY5 172 aa14.16□□□□□ -0.14
TSR1-201ENST00000301364 IGLV2-18A0A075B6J9 118 aa14.16□□□□□ -0.14
TSR1-201ENST00000301364 ATP5EP2Q5VTU8 51 aa14.15□□□□□ -0.14
TSR1-201ENST00000301364 IGLV4-69A0A075B6H9 119 aa14.14□□□□□ -0.15
TSR1-201ENST00000301364 IGHV4-28A0A0C4DH34 117 aa14.14□□□□□ -0.15
TSR1-201ENST00000301364 IMUPQ9GZP8 106 aa14.14□□□□□ -0.15
TSR1-201ENST00000301364 AVPP01185 164 aa14.13□□□□□ -0.15
TSR1-201ENST00000301364 ZNF580Q9UK33 172 aa14.12□□□□□ -0.15
TSR1-201ENST00000301364 POM121L12Q8N7R1 296 aa14.11□□□□□ -0.15
TSR1-201ENST00000301364 SDIM1Q6ZPB5 146 aa14.11□□□□□ -0.15
TSR1-201ENST00000301364 C18orf65Q6ZTR6 163 aa14.11□□□□□ -0.15
TSR1-201ENST00000301364 XGP55808 180 aa14.11□□□□□ -0.15
TSR1-201ENST00000301364 UPK3BQ9BT76 320 aa14.1□□□□□ -0.15
TSR1-201ENST00000301364 UBE2D3P61077 147 aa14.1□□□□□ -0.15
TSR1-201ENST00000301364 UBE2D2P62837 147 aa14.1□□□□□ -0.15
TSR1-201ENST00000301364 PRM2P04554 102 aa14.1□□□□□ -0.15
TSR1-201ENST00000301364 MIFP14174 115 aa14.1□□□□□ -0.15
TSR1-201ENST00000301364 SLPIP03973 132 aa14.09□□□□□ -0.15
TSR1-201ENST00000301364 CDC42SE2Q9NRR3 84 aa14.09□□□□□ -0.15
TSR1-201ENST00000301364 TRAV23DV6A0A075B6W5 121 aa14.09□□□□□ -0.15
TSR1-201ENST00000301364 MP68P56378 58 aa14.08□□□□□ -0.16
TSR1-201ENST00000301364 LINC01006Q8NI28 216 aa14.08□□□□□ -0.16
TSR1-201ENST00000301364 A0A1W2PPR1 153 aa14.08□□□□□ -0.16
TSR1-201ENST00000301364 CD164L2Q6UWJ8 174 aa14.08□□□□□ -0.16
TSR1-201ENST00000301364 EDN2P20800 178 aa14.07□□□□□ -0.16
TSR1-201ENST00000301364 C6orf99Q4VX62 202 aa14.07□□□□□ -0.16
TSR1-201ENST00000301364 LINC00242Q5T6M2 205 aa14.07□□□□□ -0.16
TSR1-201ENST00000301364 LINC00959A0A1B0GUT2 108 aa14.06□□□□□ -0.16
TSR1-201ENST00000301364 C3orf22Q8N5N4 141 aa14.06□□□□□ -0.16
TSR1-201ENST00000301364 BBC3Q96PG8 261 aaPredicted RBP14.06□□□□□ -0.16
TSR1-201ENST00000301364 ADAMTS20P59510 1910 aa14.05□□□□□ -0.16
TSR1-201ENST00000301364 ABCA2Q9BZC7 2435 aa14.05□□□□□ -0.16
TSR1-201ENST00000301364 NDUFB1O75438 58 aa14.05□□□□□ -0.16
TSR1-201ENST00000301364 TSPEAR-AS2P59090 65 aa14.05□□□□□ -0.16
TSR1-201ENST00000301364 CEP295Q9C0D2 2601 aa14.04□□□□□ -0.16
TSR1-201ENST00000301364 TET2Q6N021 2002 aaPredicted RBP14.04□□□□□ -0.16
TSR1-201ENST00000301364 LOC100131303A0A0U1RQF7 123 aa14.04□□□□□ -0.16
TSR1-201ENST00000301364 AMELXQ99217 191 aa14.04□□□□□ -0.16
TSR1-201ENST00000301364 FAM240AA0A1B0GVK7 77 aa14.03□□□□□ -0.16
TSR1-201ENST00000301364 ODF3L2Q3SX64 289 aa14.03□□□□□ -0.16
TSR1-201ENST00000301364 C11orf45Q8TAV5 145 aa14.03□□□□□ -0.16
TSR1-201ENST00000301364 BPY2O14599 106 aa14.03□□□□□ -0.16
TSR1-201ENST00000301364 SMIM11BQ8TCY0 68 aa14.03□□□□□ -0.16
TSR1-201ENST00000301364 CHCHD7Q9BUK0 85 aa14.03□□□□□ -0.16
TSR1-201ENST00000301364 LINC00482Q8N8I6 264 aa14.02□□□□□ -0.17
TSR1-201ENST00000301364 LINC01546A6NGU7 62 aa14.02□□□□□ -0.17
TSR1-201ENST00000301364 ZNF843Q8N446 348 aa14.02□□□□□ -0.17
TSR1-201ENST00000301364 Q6Q795 121 aa14.01□□□□□ -0.17
TSR1-201ENST00000301364 C20orf197Q8N268 126 aa14.01□□□□□ -0.17
TSR1-201ENST00000301364 NDUFS5O43920 106 aa14□□□□□ -0.17
TSR1-201ENST00000301364 WFDC10AQ9H1F0 79 aa14□□□□□ -0.17
TSR1-201ENST00000301364 SMIM1B2RUZ4 78 aa14□□□□□ -0.17
TSR1-201ENST00000301364 RAI1Q7Z5J4 1906 aaPredicted RBP14□□□□□ -0.17
TSR1-201ENST00000301364 COX17Q14061 63 aa14□□□□□ -0.17
TSR1-201ENST00000301364 Q8IZM0 81 aa14□□□□□ -0.17
TSR1-201ENST00000301364 MUC7Q8TAX7 377 aa14□□□□□ -0.17
TSR1-201ENST00000301364 XAGE1AQ9HD64 81 aa14□□□□□ -0.17
TSR1-201ENST00000301364 UBE2AP49459 152 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms