RNA–Protein interactions for RNA: ENST00000301323.7

RECQL4-201, Transcript of RecQ like helicase 4, humanhuman

TSL 3

Gene RECQL4, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RECQL4-201ENST00000301323 A0A1B0GXF2 115 aa10.53□□□□□ -0.72
RECQL4-201ENST00000301323 PPP1R17O96001 155 aa10.53□□□□□ -0.72
RECQL4-201ENST00000301323 FOXI1Q12951 378 aa10.53□□□□□ -0.72
RECQL4-201ENST00000301323 CIRBPQ14011 172 aaKnown RBP10.53□□□□□ -0.72
RECQL4-201ENST00000301323 BTF3L4Q96K17 158 aa10.53□□□□□ -0.72
RECQL4-201ENST00000301323 FAT3Q8TDW7 4589 aa10.52□□□□□ -0.72
RECQL4-201ENST00000301323 LRP1Q07954 4544 aaKnown RBP10.52□□□□□ -0.73
RECQL4-201ENST00000301323 CAMPP49913 170 aa10.52□□□□□ -0.73
RECQL4-201ENST00000301323 TMEM101Q96IK0 257 aa10.52□□□□□ -0.73
RECQL4-201ENST00000301323 AP5S1Q9NUS5 200 aa10.52□□□□□ -0.73
RECQL4-201ENST00000301323 GVQW2A0A096LPI5 108 aaPredicted RBP10.51□□□□□ -0.73
RECQL4-201ENST00000301323 VCYO14598 125 aa10.51□□□□□ -0.73
RECQL4-201ENST00000301323 CDC42SE2Q9NRR3 84 aa10.51□□□□□ -0.73
RECQL4-201ENST00000301323 IGHV3-64A0A075B6Q5 118 aa10.5□□□□□ -0.73
RECQL4-201ENST00000301323 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.5□□□□□ -0.73
RECQL4-201ENST00000301323 LINC00959A0A1B0GUT2 108 aa10.5□□□□□ -0.73
RECQL4-201ENST00000301323 PPP1R2P9O14990 202 aa10.5□□□□□ -0.73
RECQL4-201ENST00000301323 XCL1P47992 114 aa10.5□□□□□ -0.73
RECQL4-201ENST00000301323 HBBP68871 147 aa10.5□□□□□ -0.73
RECQL4-201ENST00000301323 HIGD2BQ4VC39 106 aa10.5□□□□□ -0.73
RECQL4-201ENST00000301323 MRPL54Q6P161 138 aaKnown RBP10.5□□□□□ -0.73
RECQL4-201ENST00000301323 CFAP161Q6P656 301 aa10.5□□□□□ -0.73
RECQL4-201ENST00000301323 TRBV24-1A0A075B6N3 115 aa10.49□□□□□ -0.73
RECQL4-201ENST00000301323 LINC00862A6NCI5 91 aa10.49□□□□□ -0.73
RECQL4-201ENST00000301323 CCL25O15444 150 aa10.49□□□□□ -0.73
RECQL4-201ENST00000301323 FCER1GP30273 86 aa10.49□□□□□ -0.73
RECQL4-201ENST00000301323 KIR2DL4Q99706 377 aa10.49□□□□□ -0.73
RECQL4-201ENST00000301323 RPL32P62910 135 aaKnown RBP10.48□□□□□ -0.73
RECQL4-201ENST00000301323 ZNF664Q8N3J9 261 aa10.48□□□□□ -0.73
RECQL4-201ENST00000301323 C20orf78Q9BR46 151 aa10.48□□□□□ -0.73
RECQL4-201ENST00000301323 UBE2D4Q9Y2X8 147 aa10.48□□□□□ -0.73
RECQL4-201ENST00000301323 CSDC2Q9Y534 153 aaKnown RBP10.48□□□□□ -0.73
RECQL4-201ENST00000301323 J3QL48 77 aa10.47□□□□□ -0.73
RECQL4-201ENST00000301323 S100A8P05109 93 aa10.47□□□□□ -0.73
RECQL4-201ENST00000301323 CHTF8P0CG12 524 aa10.47□□□□□ -0.73
RECQL4-201ENST00000301323 CKS2P33552 79 aa10.47□□□□□ -0.73
RECQL4-201ENST00000301323 SPACA4Q8TDM5 124 aa10.47□□□□□ -0.73
RECQL4-201ENST00000301323 D6R8Y8 96 aa10.46□□□□□ -0.73
RECQL4-201ENST00000301323 TNFRSF6BO95407 300 aa10.46□□□□□ -0.73
RECQL4-201ENST00000301323 SMIM2Q9BVW6 85 aa10.46□□□□□ -0.73
RECQL4-201ENST00000301323 F8W036 122 aa10.45□□□□□ -0.74
RECQL4-201ENST00000301323 NPYP01303 97 aa10.45□□□□□ -0.74
RECQL4-201ENST00000301323 RPL37AP61513 92 aaKnown RBP10.45□□□□□ -0.74
RECQL4-201ENST00000301323 CD164L2Q6UWJ8 174 aa10.45□□□□□ -0.74
RECQL4-201ENST00000301323 Q6ZUT4 128 aa10.45□□□□□ -0.74
RECQL4-201ENST00000301323 ATP5L2Q7Z4Y8 100 aa10.45□□□□□ -0.74
RECQL4-201ENST00000301323 KRTAP29-1A8MX34 341 aaPredicted RBP10.44□□□□□ -0.74
RECQL4-201ENST00000301323 PNRC1Q12796 327 aaPredicted RBP10.44□□□□□ -0.74
RECQL4-201ENST00000301323 SS18Q15532 418 aa10.44□□□□□ -0.74
RECQL4-201ENST00000301323 RNASE13Q5GAN3 156 aaKnown RBP10.44□□□□□ -0.74
RECQL4-201ENST00000301323 TIMM21Q9BVV7 248 aa10.44□□□□□ -0.74
RECQL4-201ENST00000301323 IGHV1-58A0A0C4DH39 117 aa10.43□□□□□ -0.74
RECQL4-201ENST00000301323 PHOX2AO14813 284 aa10.43□□□□□ -0.74
RECQL4-201ENST00000301323 PPBPP02775 128 aa10.43□□□□□ -0.74
RECQL4-201ENST00000301323 RAB14P61106 215 aa10.43□□□□□ -0.74
RECQL4-201ENST00000301323 SMAGPQ0VAQ4 97 aa10.43□□□□□ -0.74
RECQL4-201ENST00000301323 A0A087WYN8 130 aa10.42□□□□□ -0.74
RECQL4-201ENST00000301323 TCAPO15273 167 aa10.42□□□□□ -0.74
RECQL4-201ENST00000301323 HNRNPA3P51991 378 aaKnown RBP10.42□□□□□ -0.74
RECQL4-201ENST00000301323 COX6A2Q02221 97 aa10.42□□□□□ -0.74
RECQL4-201ENST00000301323 CLLU1Q5K131 121 aa10.42□□□□□ -0.74
RECQL4-201ENST00000301323 PRSS3P2Q8NHM4 247 aa10.42□□□□□ -0.74
RECQL4-201ENST00000301323 C1orf196B1AJZ1 125 aa10.41□□□□□ -0.74
RECQL4-201ENST00000301323 RPL39P62891 51 aaKnown RBP10.41□□□□□ -0.74
RECQL4-201ENST00000301323 ORMDL3Q8N138 153 aa10.41□□□□□ -0.74
RECQL4-201ENST00000301323 FAM104AQ969W3 186 aa10.41□□□□□ -0.74
RECQL4-201ENST00000301323 TMEM18Q96B42 140 aa10.41□□□□□ -0.74
RECQL4-201ENST00000301323 LINC00526Q96FQ7 95 aa10.41□□□□□ -0.74
RECQL4-201ENST00000301323 PLAC8Q9NZF1 115 aa10.41□□□□□ -0.74
RECQL4-201ENST00000301323 A0A096LNI7 61 aa10.39□□□□□ -0.75
RECQL4-201ENST00000301323 TRAV13-1A0A0B4J241 112 aa10.39□□□□□ -0.75
RECQL4-201ENST00000301323 MT-ND4LP03901 98 aa10.39□□□□□ -0.75
RECQL4-201ENST00000301323 ANAPC16Q96DE5 110 aa10.39□□□□□ -0.75
RECQL4-201ENST00000301323 CARD19Q96LW7 228 aa10.39□□□□□ -0.75
RECQL4-201ENST00000301323 SPANXA1Q9NS26 97 aa10.39□□□□□ -0.75
RECQL4-201ENST00000301323 COX7A2LO14548 114 aa10.38□□□□□ -0.75
RECQL4-201ENST00000301323 TMEM136Q6ZRR5 245 aa10.38□□□□□ -0.75
RECQL4-201ENST00000301323 PRELID3AQ96N28 172 aa10.38□□□□□ -0.75
RECQL4-201ENST00000301323 IGKV2-24A0A0C4DH68 120 aa10.37□□□□□ -0.75
RECQL4-201ENST00000301323 ADCYAP1P18509 176 aa10.37□□□□□ -0.75
RECQL4-201ENST00000301323 IFITM2Q01629 132 aa10.37□□□□□ -0.75
RECQL4-201ENST00000301323 MRPS36P82909 103 aaKnown RBP10.36□□□□□ -0.75
RECQL4-201ENST00000301323 SYCNQ0VAF6 134 aa10.36□□□□□ -0.75
RECQL4-201ENST00000301323 MAJINQ3KP22 176 aa10.36□□□□□ -0.75
RECQL4-201ENST00000301323 OPRPNQ99935 248 aaPredicted RBP10.36□□□□□ -0.75
RECQL4-201ENST00000301323 LAMTOR2Q9Y2Q5 125 aa10.36□□□□□ -0.75
RECQL4-201ENST00000301323 IGLV4-69A0A075B6H9 119 aa10.35□□□□□ -0.75
RECQL4-201ENST00000301323 ZNF561-AS1K7EIQ3 104 aa10.35□□□□□ -0.75
RECQL4-201ENST00000301323 MALP21145 153 aa10.35□□□□□ -0.75
RECQL4-201ENST00000301323 DPH3Q96FX2 82 aa10.35□□□□□ -0.75
RECQL4-201ENST00000301323 PKIGQ9Y2B9 76 aa10.35□□□□□ -0.75
RECQL4-201ENST00000301323 HMCN2Q8NDA2 5059 aa10.34□□□□□ -0.75
RECQL4-201ENST00000301323 PRSS47A8MTI9 375 aa10.34□□□□□ -0.75
RECQL4-201ENST00000301323 OXTP01178 125 aa10.34□□□□□ -0.75
RECQL4-201ENST00000301323 C5orf38Q86SI9 138 aa10.34□□□□□ -0.75
RECQL4-201ENST00000301323 IFITM10A6NMD0 228 aa10.33□□□□□ -0.76
RECQL4-201ENST00000301323 UQCC3Q6UW78 93 aa10.33□□□□□ -0.76
RECQL4-201ENST00000301323 Q6ZRU5 148 aa10.33□□□□□ -0.76
RECQL4-201ENST00000301323 STPG4Q8N801 248 aa10.33□□□□□ -0.76
RECQL4-201ENST00000301323 MAP1LC3AQ9H492 121 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms