RNA–Protein interactions for RNA: ENST00000296861.2

TNFRSF21-201, Transcript of TNF receptor superfamily member 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF21, Length 3,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF21-201ENST00000296861 LGALS9O00182 355 aa9.78□□□□□ -0.84
TNFRSF21-201ENST00000296861 GAGE7O76087 117 aa9.78□□□□□ -0.84
TNFRSF21-201ENST00000296861 GAGE12FP0CL80 117 aa9.78□□□□□ -0.84
TNFRSF21-201ENST00000296861 GAGE12GP0CL81 117 aa9.78□□□□□ -0.84
TNFRSF21-201ENST00000296861 GAGE12IP0CL82 117 aa9.78□□□□□ -0.84
TNFRSF21-201ENST00000296861 ICOSQ9Y6W8 199 aa9.78□□□□□ -0.84
TNFRSF21-201ENST00000296861 RHOHQ15669 191 aa9.78□□□□□ -0.84
TNFRSF21-201ENST00000296861 C19orf54Q5BKX5 351 aa9.78□□□□□ -0.84
TNFRSF21-201ENST00000296861 UBE2L6O14933 153 aa9.77□□□□□ -0.85
TNFRSF21-201ENST00000296861 RBMY1A1P0DJD3 496 aaKnown RBP9.77□□□□□ -0.85
TNFRSF21-201ENST00000296861 RBMY1CP0DJD4 496 aa9.77□□□□□ -0.85
TNFRSF21-201ENST00000296861 RBMY1FQ15415 496 aaKnown RBP9.77□□□□□ -0.85
TNFRSF21-201ENST00000296861 MED14OSP0DP75 135 aa9.77□□□□□ -0.85
TNFRSF21-201ENST00000296861 STHQ8IWL8 128 aa9.77□□□□□ -0.85
TNFRSF21-201ENST00000296861 NIPBLQ6KC79 2804 aaeCLIP9.77□□□□□ -0.85
TNFRSF21-201ENST00000296861 ZNF415Q09FC8 603 aa9.76□□□□□ -0.85
TNFRSF21-201ENST00000296861 POM121L12Q8N7R1 296 aa9.76□□□□□ -0.85
TNFRSF21-201ENST00000296861 FASNP49327 2511 aaKnown RBP9.76□□□□□ -0.85
TNFRSF21-201ENST00000296861 EIF4EBP3O60516 100 aaPredicted RBP9.76□□□□□ -0.85
TNFRSF21-201ENST00000296861 NDUFV3P56181 108 aaKnown RBP9.76□□□□□ -0.85
TNFRSF21-201ENST00000296861 TMEM263Q8WUH6 116 aaKnown RBP9.76□□□□□ -0.85
TNFRSF21-201ENST00000296861 CCDC179H3BU77 68 aa9.75□□□□□ -0.85
TNFRSF21-201ENST00000296861 PFN2P35080 140 aa9.75□□□□□ -0.85
TNFRSF21-201ENST00000296861 PSMB8P28062 276 aa9.75□□□□□ -0.85
TNFRSF21-201ENST00000296861 IGLV1-40P01703 118 aa9.74□□□□□ -0.85
TNFRSF21-201ENST00000296861 C9orf85Q96MD7 179 aa9.74□□□□□ -0.85
TNFRSF21-201ENST00000296861 A0A096LPF7 62 aa9.74□□□□□ -0.85
TNFRSF21-201ENST00000296861 HECTD1Q9ULT8 2610 aa9.74□□□□□ -0.85
TNFRSF21-201ENST00000296861 IGHV1-58A0A0C4DH39 117 aa9.74□□□□□ -0.85
TNFRSF21-201ENST00000296861 CLPSL2Q6UWE3 100 aa9.74□□□□□ -0.85
TNFRSF21-201ENST00000296861 LINC00158P58513 81 aa9.73□□□□□ -0.85
TNFRSF21-201ENST00000296861 PIK3CD-AS1Q5SR53 167 aa9.73□□□□□ -0.85
TNFRSF21-201ENST00000296861 Q9HAA7 133 aa9.73□□□□□ -0.85
TNFRSF21-201ENST00000296861 H3BUA1 57 aa9.73□□□□□ -0.85
TNFRSF21-201ENST00000296861 TRBV10-2A0A0K0K1G8 114 aa9.73□□□□□ -0.85
TNFRSF21-201ENST00000296861 K7EMT4 169 aa9.73□□□□□ -0.85
TNFRSF21-201ENST00000296861 NXPH4O95158 308 aa9.72□□□□□ -0.85
TNFRSF21-201ENST00000296861 NOP10Q9NPE3 64 aaKnown RBP9.72□□□□□ -0.85
TNFRSF21-201ENST00000296861 NSUN5P1Q3KNT7 163 aa9.72□□□□□ -0.85
TNFRSF21-201ENST00000296861 LINC01356Q8N9X3 169 aa9.72□□□□□ -0.85
TNFRSF21-201ENST00000296861 ITPR3Q14573 2671 aa9.72□□□□□ -0.85
TNFRSF21-201ENST00000296861 HELZ2Q9BYK8 2649 aaKnown RBP9.72□□□□□ -0.85
TNFRSF21-201ENST00000296861 A0A0B4J2C4 111 aa9.71□□□□□ -0.85
TNFRSF21-201ENST00000296861 CHCHD5Q9BSY4 110 aa9.71□□□□□ -0.85
TNFRSF21-201ENST00000296861 GAGE2AQ6NT46 116 aa9.71□□□□□ -0.85
TNFRSF21-201ENST00000296861 DEFB130BP0DP73 79 aa9.71□□□□□ -0.86
TNFRSF21-201ENST00000296861 DEFB130AP0DP74 79 aa9.71□□□□□ -0.86
TNFRSF21-201ENST00000296861 FAM19A4Q96LR4 140 aa9.71□□□□□ -0.86
TNFRSF21-201ENST00000296861 WFDC10AQ9H1F0 79 aa9.71□□□□□ -0.86
TNFRSF21-201ENST00000296861 PPDPFQ9H3Y8 114 aa9.71□□□□□ -0.86
TNFRSF21-201ENST00000296861 ITPR2Q14571 2701 aa9.71□□□□□ -0.86
TNFRSF21-201ENST00000296861 TRBV6-5A0A0K0K1A5 114 aa9.7□□□□□ -0.86
TNFRSF21-201ENST00000296861 COX6A2Q02221 97 aa9.7□□□□□ -0.86
TNFRSF21-201ENST00000296861 Q6ZTI0 123 aa9.7□□□□□ -0.86
TNFRSF21-201ENST00000296861 VSIG2Q96IQ7 327 aa9.7□□□□□ -0.86
TNFRSF21-201ENST00000296861 AMELXQ99217 191 aa9.7□□□□□ -0.86
TNFRSF21-201ENST00000296861 FAM110AQ9BQ89 295 aa9.7□□□□□ -0.86
TNFRSF21-201ENST00000296861 INSP01308 110 aa9.7□□□□□ -0.86
TNFRSF21-201ENST00000296861 PLA2G2AP14555 144 aa9.7□□□□□ -0.86
TNFRSF21-201ENST00000296861 RPL36AP83881 106 aaKnown RBP9.7□□□□□ -0.86
TNFRSF21-201ENST00000296861 RPL36ALQ969Q0 106 aaKnown RBP9.7□□□□□ -0.86
TNFRSF21-201ENST00000296861 BBC3Q96PG8 261 aaPredicted RBP9.7□□□□□ -0.86
TNFRSF21-201ENST00000296861 VPREB3Q9UKI3 123 aa9.7□□□□□ -0.86
TNFRSF21-201ENST00000296861 NBPF19A0A087WUL8 3843 aa9.69□□□□□ -0.86
TNFRSF21-201ENST00000296861 LINC00694P0DN24 101 aa9.69□□□□□ -0.86
TNFRSF21-201ENST00000296861 C5orf38Q86SI9 138 aa9.69□□□□□ -0.86
TNFRSF21-201ENST00000296861 TRGV4A0A0C4DH28 118 aa9.69□□□□□ -0.86
TNFRSF21-201ENST00000296861 H7C423 109 aa9.69□□□□□ -0.86
TNFRSF21-201ENST00000296861 DNAL4O96015 105 aa9.69□□□□□ -0.86
TNFRSF21-201ENST00000296861 PEMTQ9UBM1 199 aa9.69□□□□□ -0.86
TNFRSF21-201ENST00000296861 MIAQ16674 131 aa9.68□□□□□ -0.86
TNFRSF21-201ENST00000296861 RBMY1BA6NDE4 496 aaKnown RBP9.68□□□□□ -0.86
TNFRSF21-201ENST00000296861 RBMY1EA6NEQ0 496 aaKnown RBP9.68□□□□□ -0.86
TNFRSF21-201ENST00000296861 RBMY1DP0C7P1 496 aaKnown RBP9.68□□□□□ -0.86
TNFRSF21-201ENST00000296861 HIST2H2BCQ6DN03 193 aa9.68□□□□□ -0.86
TNFRSF21-201ENST00000296861 TMEM101Q96IK0 257 aa9.68□□□□□ -0.86
TNFRSF21-201ENST00000296861 PAX4O43316 350 aa9.68□□□□□ -0.86
TNFRSF21-201ENST00000296861 LOC100131303A0A0U1RQF7 123 aa9.67□□□□□ -0.86
TNFRSF21-201ENST00000296861 SBSPONQ8IVN8 264 aa9.67□□□□□ -0.86
TNFRSF21-201ENST00000296861 ESM1Q9NQ30 184 aa9.67□□□□□ -0.86
TNFRSF21-201ENST00000296861 MAP6D1Q9H9H5 199 aa9.67□□□□□ -0.86
TNFRSF21-201ENST00000296861 UBE2D4Q9Y2X8 147 aa9.67□□□□□ -0.86
TNFRSF21-201ENST00000296861 ATP5G1P05496 136 aa9.67□□□□□ -0.86
TNFRSF21-201ENST00000296861 TRBV30A0A0K0K1B3 111 aa9.66□□□□□ -0.86
TNFRSF21-201ENST00000296861 MRPL23Q16540 153 aaKnown RBP9.65□□□□□ -0.86
TNFRSF21-201ENST00000296861 ZNF469Q96JG9 3925 aaPredicted RBP9.65□□□□□ -0.86
TNFRSF21-201ENST00000296861 FAM236AA0A1B0GUQ0 79 aa9.65□□□□□ -0.86
TNFRSF21-201ENST00000296861 FAM236BA0A1B0GV22 79 aa9.65□□□□□ -0.86
TNFRSF21-201ENST00000296861 NHLRC4P0CG21 123 aaPredicted RBP9.65□□□□□ -0.86
TNFRSF21-201ENST00000296861 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.65□□□□□ -0.86
TNFRSF21-201ENST00000296861 TINCRA0A1B0GVN0 87 aa9.65□□□□□ -0.87
TNFRSF21-201ENST00000296861 BAALC-AS2P0C853 105 aa9.65□□□□□ -0.87
TNFRSF21-201ENST00000296861 KRTAP10-9P60411 292 aa9.65□□□□□ -0.87
TNFRSF21-201ENST00000296861 Q96MF0 132 aa9.65□□□□□ -0.87
TNFRSF21-201ENST00000296861 ODF3Q96PU9 254 aa9.65□□□□□ -0.87
TNFRSF21-201ENST00000296861 APCP25054 2843 aa9.65□□□□□ -0.87
TNFRSF21-201ENST00000296861 CHCHD7Q9BUK0 85 aa9.64□□□□□ -0.87
TNFRSF21-201ENST00000296861 MRPS36P82909 103 aaKnown RBP9.64□□□□□ -0.87
TNFRSF21-201ENST00000296861 SPANXA1Q9NS26 97 aa9.64□□□□□ -0.87
TNFRSF21-201ENST00000296861 CRPP02741 224 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms