RNA–Protein interactions for RNA: ENST00000296026.4

CXCL3-201, Transcript of C-X-C motif chemokine ligand 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL3, Length 1,075 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3-201ENST00000296026 IGHV1-58A0A0C4DH39 117 aa12.29□□□□□ -0.44
CXCL3-201ENST00000296026 LINC00526Q96FQ7 95 aa12.29□□□□□ -0.44
CXCL3-201ENST00000296026 MRAP2Q96G30 205 aa12.29□□□□□ -0.44
CXCL3-201ENST00000296026 SS18Q15532 418 aa12.28□□□□□ -0.44
CXCL3-201ENST00000296026 TMEM191AQ9H0A3 160 aa12.28□□□□□ -0.44
CXCL3-201ENST00000296026 A0A1B0GUT8 65 aa12.27□□□□□ -0.45
CXCL3-201ENST00000296026 POLR2KP53803 58 aaKnown RBP12.27□□□□□ -0.45
CXCL3-201ENST00000296026 CARD19Q96LW7 228 aa12.27□□□□□ -0.45
CXCL3-201ENST00000296026 FAM210AQ96ND0 272 aa12.27□□□□□ -0.45
CXCL3-201ENST00000296026 CDC42SE2Q9NRR3 84 aa12.27□□□□□ -0.45
CXCL3-201ENST00000296026 LINC00474Q9P2X8 69 aa12.27□□□□□ -0.45
CXCL3-201ENST00000296026 PKIGQ9Y2B9 76 aa12.27□□□□□ -0.45
CXCL3-201ENST00000296026 HIGD1CA8MV81 97 aa12.26□□□□□ -0.45
CXCL3-201ENST00000296026 MRPL52Q86TS9 123 aaKnown RBP12.26□□□□□ -0.45
CXCL3-201ENST00000296026 TSKUQ8WUA8 353 aa12.26□□□□□ -0.45
CXCL3-201ENST00000296026 TRBV27A0A0K0K1C4 114 aa12.25□□□□□ -0.45
CXCL3-201ENST00000296026 RAB4AP20338 218 aa12.25□□□□□ -0.45
CXCL3-201ENST00000296026 CD164L2Q6UWJ8 174 aa12.25□□□□□ -0.45
CXCL3-201ENST00000296026 LINC01551Q86U37 167 aa12.25□□□□□ -0.45
CXCL3-201ENST00000296026 ZNF664Q8N3J9 261 aa12.25□□□□□ -0.45
CXCL3-201ENST00000296026 LINC01600Q96MT4 127 aa12.25□□□□□ -0.45
CXCL3-201ENST00000296026 SMIM7Q9BQ49 75 aa12.25□□□□□ -0.45
CXCL3-201ENST00000296026 C7orf77A4D0Y5 90 aa12.24□□□□□ -0.45
CXCL3-201ENST00000296026 ZNF561-AS1K7EIQ3 104 aa12.24□□□□□ -0.45
CXCL3-201ENST00000296026 AMN1Q8IY45 258 aa12.24□□□□□ -0.45
CXCL3-201ENST00000296026 SYCNQ0VAF6 134 aa12.23□□□□□ -0.45
CXCL3-201ENST00000296026 EIF5A2Q9GZV4 153 aaKnown RBP12.23□□□□□ -0.45
CXCL3-201ENST00000296026 AKAP14Q86UN6 197 aa12.22□□□□□ -0.45
CXCL3-201ENST00000296026 OSTCQ9NRP0 149 aa12.22□□□□□ -0.45
CXCL3-201ENST00000296026 ZNF727A8MUV8 499 aa12.21□□□□□ -0.45
CXCL3-201ENST00000296026 SMKR1H3BMG3 65 aa12.21□□□□□ -0.45
CXCL3-201ENST00000296026 VCYO14598 125 aa12.2□□□□□ -0.46
CXCL3-201ENST00000296026 FCER1GP30273 86 aa12.2□□□□□ -0.46
CXCL3-201ENST00000296026 CAMPP49913 170 aa12.2□□□□□ -0.46
CXCL3-201ENST00000296026 SPINK6Q6UWN8 80 aa12.2□□□□□ -0.46
CXCL3-201ENST00000296026 C1orf196B1AJZ1 125 aa12.19□□□□□ -0.46
CXCL3-201ENST00000296026 MALP21145 153 aa12.19□□□□□ -0.46
CXCL3-201ENST00000296026 IGLV4-69A0A075B6H9 119 aa12.18□□□□□ -0.46
CXCL3-201ENST00000296026 A0A0J9YXV3 536 aa12.18□□□□□ -0.46
CXCL3-201ENST00000296026 SRP19P09132 144 aaKnown RBP12.18□□□□□ -0.46
CXCL3-201ENST00000296026 PTTG1IPP53801 180 aa12.18□□□□□ -0.46
CXCL3-201ENST00000296026 RIGQ13278 110 aa12.18□□□□□ -0.46
CXCL3-201ENST00000296026 ODF1Q14990 250 aa12.18□□□□□ -0.46
CXCL3-201ENST00000296026 Q6ZRP5 223 aa12.18□□□□□ -0.46
CXCL3-201ENST00000296026 NUP35Q8NFH5 326 aa12.18□□□□□ -0.46
CXCL3-201ENST00000296026 ISOC2Q96AB3 205 aa12.18□□□□□ -0.46
CXCL3-201ENST00000296026 CSDC2Q9Y534 153 aaKnown RBP12.18□□□□□ -0.46
CXCL3-201ENST00000296026 V9GYV3 84 aa12.18□□□□□ -0.46
CXCL3-201ENST00000296026 COX7A2LO14548 114 aa12.17□□□□□ -0.46
CXCL3-201ENST00000296026 SUMO2P61956 95 aaKnown RBP12.17□□□□□ -0.46
CXCL3-201ENST00000296026 GAGE2BQ13066 116 aa12.17□□□□□ -0.46
CXCL3-201ENST00000296026 RNASE13Q5GAN3 156 aaKnown RBP12.17□□□□□ -0.46
CXCL3-201ENST00000296026 REG3GQ6UW15 175 aa12.17□□□□□ -0.46
CXCL3-201ENST00000296026 NRACQ8N912 160 aa12.17□□□□□ -0.46
CXCL3-201ENST00000296026 UBE2D4Q9Y2X8 147 aa12.17□□□□□ -0.46
CXCL3-201ENST00000296026 hCG_2014768A0A024R1R8 64 aa12.16□□□□□ -0.46
CXCL3-201ENST00000296026 LOC107984640A0A0U1RRK4 108 aa12.16□□□□□ -0.46
CXCL3-201ENST00000296026 PPP1R17O96001 155 aa12.16□□□□□ -0.46
CXCL3-201ENST00000296026 SMAGPQ0VAQ4 97 aa12.16□□□□□ -0.46
CXCL3-201ENST00000296026 SRSF9Q13242 221 aaKnown RBP eCLIP12.16□□□□□ -0.46
CXCL3-201ENST00000296026 KIR2DL4Q99706 377 aa12.16□□□□□ -0.46
CXCL3-201ENST00000296026 CAMK2N2Q96S95 79 aa12.15□□□□□ -0.46
CXCL3-201ENST00000296026 TRAV13-1A0A0B4J241 112 aa12.14□□□□□ -0.47
CXCL3-201ENST00000296026 KRTAP10-8P60410 259 aa12.14□□□□□ -0.47
CXCL3-201ENST00000296026 C5orf38Q86SI9 138 aa12.13□□□□□ -0.47
CXCL3-201ENST00000296026 NAT8BQ9UHF3 227 aa12.13□□□□□ -0.47
CXCL3-201ENST00000296026 TNXBP22105 4242 aa12.12□□□□□ -0.47
CXCL3-201ENST00000296026 A0A1W2PNN7 141 aa12.12□□□□□ -0.47
CXCL3-201ENST00000296026 PPP1R2P9O14990 202 aa12.12□□□□□ -0.47
CXCL3-201ENST00000296026 TMEM241Q24JQ0 296 aa12.12□□□□□ -0.47
CXCL3-201ENST00000296026 MRPL51Q4U2R6 128 aaKnown RBP12.12□□□□□ -0.47
CXCL3-201ENST00000296026 FAM104BQ5XKR9 115 aa12.12□□□□□ -0.47
CXCL3-201ENST00000296026 Q6ZUT4 128 aa12.12□□□□□ -0.47
CXCL3-201ENST00000296026 C2orf48Q96LS8 159 aa12.12□□□□□ -0.47
CXCL3-201ENST00000296026 APOMO95445 188 aa12.11□□□□□ -0.47
CXCL3-201ENST00000296026 RPL23P62829 140 aaKnown RBP12.11□□□□□ -0.47
CXCL3-201ENST00000296026 TMEM18Q96B42 140 aa12.11□□□□□ -0.47
CXCL3-201ENST00000296026 TIMM21Q9BVV7 248 aa12.11□□□□□ -0.47
CXCL3-201ENST00000296026 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.09□□□□□ -0.47
CXCL3-201ENST00000296026 RPL18AQ02543 176 aaKnown RBP12.09□□□□□ -0.47
CXCL3-201ENST00000296026 FAM74A3Q4VXF1 159 aa12.09□□□□□ -0.47
CXCL3-201ENST00000296026 LINC00862A6NCI5 91 aa12.08□□□□□ -0.48
CXCL3-201ENST00000296026 SPAG11BQ08648 103 aa12.08□□□□□ -0.48
CXCL3-201ENST00000296026 ADIRFQ15847 76 aa12.08□□□□□ -0.48
CXCL3-201ENST00000296026 C9orf116Q5BN46 136 aaPredicted RBP12.08□□□□□ -0.48
CXCL3-201ENST00000296026 OPRPNQ99935 248 aaPredicted RBP12.08□□□□□ -0.48
CXCL3-201ENST00000296026 C20orf78Q9BR46 151 aa12.08□□□□□ -0.48
CXCL3-201ENST00000296026 TRBV24-1A0A075B6N3 115 aa12.07□□□□□ -0.48
CXCL3-201ENST00000296026 SMIM27A0A1W2PRY6 76 aa12.07□□□□□ -0.48
CXCL3-201ENST00000296026 CKS2P33552 79 aa12.07□□□□□ -0.48
CXCL3-201ENST00000296026 RPL39P62891 51 aaKnown RBP12.06□□□□□ -0.48
CXCL3-201ENST00000296026 RPL32P62910 135 aaKnown RBP12.06□□□□□ -0.48
CXCL3-201ENST00000296026 NAT8Q9UHE5 227 aa12.06□□□□□ -0.48
CXCL3-201ENST00000296026 PSORS1C2Q9UIG4 136 aa12.06□□□□□ -0.48
CXCL3-201ENST00000296026 A0A1B0GW15 77 aa12.05□□□□□ -0.48
CXCL3-201ENST00000296026 TCAPO15273 167 aa12.05□□□□□ -0.48
CXCL3-201ENST00000296026 TNFRSF6BO95407 300 aa12.05□□□□□ -0.48
CXCL3-201ENST00000296026 MT-ND6P03923 174 aa12.05□□□□□ -0.48
CXCL3-201ENST00000296026 RNF151Q2KHN1 245 aa12.05□□□□□ -0.48
CXCL3-201ENST00000296026 OR10D4PQ8NGN7 298 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms