RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 BEAN1Q3B7T3 259 aa11.37□□□□□ -0.59
NCKIPSD-201ENST00000294129 GEMIN7Q9H840 131 aaKnown RBP11.37□□□□□ -0.59
NCKIPSD-201ENST00000294129 PYGO1Q9Y3Y4 419 aa11.37□□□□□ -0.59
NCKIPSD-201ENST00000294129 GAGE12JA6NER3 117 aa11.37□□□□□ -0.59
NCKIPSD-201ENST00000294129 J3QKU1 62 aa11.37□□□□□ -0.59
NCKIPSD-201ENST00000294129 GAGE4Q13068 117 aa11.37□□□□□ -0.59
NCKIPSD-201ENST00000294129 GAGE5Q13069 117 aa11.37□□□□□ -0.59
NCKIPSD-201ENST00000294129 NDUFA7O95182 113 aa11.36□□□□□ -0.59
NCKIPSD-201ENST00000294129 FOXI1Q12951 378 aa11.36□□□□□ -0.59
NCKIPSD-201ENST00000294129 MUSTN1Q8IVN3 82 aa11.36□□□□□ -0.59
NCKIPSD-201ENST00000294129 EDA2RQ9HAV5 297 aa11.36□□□□□ -0.59
NCKIPSD-201ENST00000294129 GAGE7O76087 117 aa11.36□□□□□ -0.59
NCKIPSD-201ENST00000294129 GAGE12FP0CL80 117 aa11.36□□□□□ -0.59
NCKIPSD-201ENST00000294129 GAGE12GP0CL81 117 aa11.36□□□□□ -0.59
NCKIPSD-201ENST00000294129 GAGE12IP0CL82 117 aa11.36□□□□□ -0.59
NCKIPSD-201ENST00000294129 VWFP04275 2813 aa11.35□□□□□ -0.59
NCKIPSD-201ENST00000294129 SCGB1C2P0DMR2 95 aa11.35□□□□□ -0.59
NCKIPSD-201ENST00000294129 SCGB1A1P11684 91 aa11.35□□□□□ -0.59
NCKIPSD-201ENST00000294129 MRPS36P82909 103 aaKnown RBP11.35□□□□□ -0.59
NCKIPSD-201ENST00000294129 RNASE1P07998 156 aaKnown RBP11.35□□□□□ -0.59
NCKIPSD-201ENST00000294129 A0A0J9YXY3 114 aa11.34□□□□□ -0.59
NCKIPSD-201ENST00000294129 LINC00694P0DN24 101 aa11.34□□□□□ -0.59
NCKIPSD-201ENST00000294129 SPANXA1Q9NS26 97 aa11.34□□□□□ -0.59
NCKIPSD-201ENST00000294129 TRGV2A0A075B6R0 118 aa11.34□□□□□ -0.59
NCKIPSD-201ENST00000294129 C1QTNF4Q9BXJ3 329 aa11.34□□□□□ -0.59
NCKIPSD-201ENST00000294129 PIK3CD-AS1Q5SR53 167 aa11.34□□□□□ -0.59
NCKIPSD-201ENST00000294129 NDUFA12Q9UI09 145 aa11.34□□□□□ -0.59
NCKIPSD-201ENST00000294129 CDKN2A-AS1Q9UH64 79 aa11.33□□□□□ -0.6
NCKIPSD-201ENST00000294129 Q1RN00 199 aa11.33□□□□□ -0.6
NCKIPSD-201ENST00000294129 TMEM263Q8WUH6 116 aaKnown RBP11.33□□□□□ -0.6
NCKIPSD-201ENST00000294129 DNAJC30Q96LL9 226 aa11.33□□□□□ -0.6
NCKIPSD-201ENST00000294129 PRO1854Q9UHT4 67 aa11.33□□□□□ -0.6
NCKIPSD-201ENST00000294129 TRAV13-1A0A0B4J241 112 aa11.32□□□□□ -0.6
NCKIPSD-201ENST00000294129 GIG44P09565 113 aaPredicted RBP11.32□□□□□ -0.6
NCKIPSD-201ENST00000294129 LOC100131303A0A0U1RQF7 123 aa11.32□□□□□ -0.6
NCKIPSD-201ENST00000294129 RPL36AP83881 106 aaKnown RBP11.32□□□□□ -0.6
NCKIPSD-201ENST00000294129 DAND5Q8N907 189 aa11.32□□□□□ -0.6
NCKIPSD-201ENST00000294129 RPL36ALQ969Q0 106 aaKnown RBP11.32□□□□□ -0.6
NCKIPSD-201ENST00000294129 IGHV1-58A0A0C4DH39 117 aa11.31□□□□□ -0.6
NCKIPSD-201ENST00000294129 A0A0U1RRA0 63 aa11.31□□□□□ -0.6
NCKIPSD-201ENST00000294129 K7EQD1 137 aa11.31□□□□□ -0.6
NCKIPSD-201ENST00000294129 TCL1BO95988 128 aa11.31□□□□□ -0.6
NCKIPSD-201ENST00000294129 UBE2D3P61077 147 aa11.31□□□□□ -0.6
NCKIPSD-201ENST00000294129 UBE2D2P62837 147 aa11.31□□□□□ -0.6
NCKIPSD-201ENST00000294129 EIF4EBP3O60516 100 aaPredicted RBP11.31□□□□□ -0.6
NCKIPSD-201ENST00000294129 COX6A2Q02221 97 aa11.31□□□□□ -0.6
NCKIPSD-201ENST00000294129 ZNF625Q96I27 306 aaPredicted RBP11.31□□□□□ -0.6
NCKIPSD-201ENST00000294129 OTOGQ6ZRI0 2925 aa11.31□□□□□ -0.6
NCKIPSD-201ENST00000294129 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.31□□□□□ -0.6
NCKIPSD-201ENST00000294129 A0A1B0GV72 72 aa11.3□□□□□ -0.6
NCKIPSD-201ENST00000294129 TINCRA0A1B0GVN0 87 aa11.3□□□□□ -0.6
NCKIPSD-201ENST00000294129 ADAMTSL4-AS1Q5T5F5 129 aa11.3□□□□□ -0.6
NCKIPSD-201ENST00000294129 VSIG2Q96IQ7 327 aa11.3□□□□□ -0.6
NCKIPSD-201ENST00000294129 KMT2BQ9UMN6 2715 aaPredicted RBP11.3□□□□□ -0.6
NCKIPSD-201ENST00000294129 CDIP1Q9H305 208 aa11.3□□□□□ -0.6
NCKIPSD-201ENST00000294129 IGKV3OR2-268A0A0C4DH90 116 aa11.29□□□□□ -0.6
NCKIPSD-201ENST00000294129 NTM-AS1Q6ZSK4 140 aa11.29□□□□□ -0.6
NCKIPSD-201ENST00000294129 IGLV1-51P01701 117 aa11.29□□□□□ -0.6
NCKIPSD-201ENST00000294129 CLUHP3Q96NS8 147 aa11.29□□□□□ -0.6
NCKIPSD-201ENST00000294129 ATRQ13535 2644 aa11.28□□□□□ -0.6
NCKIPSD-201ENST00000294129 CKS1BP61024 79 aa11.28□□□□□ -0.6
NCKIPSD-201ENST00000294129 IL17DQ8TAD2 202 aa11.28□□□□□ -0.6
NCKIPSD-201ENST00000294129 CARD19Q96LW7 228 aa11.28□□□□□ -0.6
NCKIPSD-201ENST00000294129 C16orf95Q9H693 158 aa11.28□□□□□ -0.6
NCKIPSD-201ENST00000294129 PF4P02776 101 aa11.28□□□□□ -0.6
NCKIPSD-201ENST00000294129 HILS1P60008 231 aa11.28□□□□□ -0.6
NCKIPSD-201ENST00000294129 TRAV4A0A0B4J268 109 aa11.27□□□□□ -0.61
NCKIPSD-201ENST00000294129 MT-ATP8P03928 68 aa11.27□□□□□ -0.61
NCKIPSD-201ENST00000294129 ATP6V0E2Q8NHE4 81 aa11.27□□□□□ -0.61
NCKIPSD-201ENST00000294129 ERG28Q9UKR5 140 aa11.27□□□□□ -0.61
NCKIPSD-201ENST00000294129 TENM1Q9UKZ4 2725 aa11.26□□□□□ -0.61
NCKIPSD-201ENST00000294129 TRGV4A0A0C4DH28 118 aa11.26□□□□□ -0.61
NCKIPSD-201ENST00000294129 CRYBA4P53673 196 aa11.26□□□□□ -0.61
NCKIPSD-201ENST00000294129 C19orf73Q9NVV2 129 aa11.26□□□□□ -0.61
NCKIPSD-201ENST00000294129 LYRM7Q5U5X0 104 aa11.26□□□□□ -0.61
NCKIPSD-201ENST00000294129 IGHV3-33P01772 117 aa11.25□□□□□ -0.61
NCKIPSD-201ENST00000294129 DEFB130BP0DP73 79 aa11.25□□□□□ -0.61
NCKIPSD-201ENST00000294129 DEFB130AP0DP74 79 aa11.25□□□□□ -0.61
NCKIPSD-201ENST00000294129 TEN1Q86WV5 123 aa11.25□□□□□ -0.61
NCKIPSD-201ENST00000294129 TMEM101Q96IK0 257 aa11.25□□□□□ -0.61
NCKIPSD-201ENST00000294129 LITAFQ99732 161 aa11.25□□□□□ -0.61
NCKIPSD-201ENST00000294129 PLAC8L1A1L4L8 177 aa11.25□□□□□ -0.61
NCKIPSD-201ENST00000294129 UBE2L6O14933 153 aa11.25□□□□□ -0.61
NCKIPSD-201ENST00000294129 XGP55808 180 aa11.25□□□□□ -0.61
NCKIPSD-201ENST00000294129 KRTAP10-3P60369 221 aa11.25□□□□□ -0.61
NCKIPSD-201ENST00000294129 LINC00242Q5T6M2 205 aa11.25□□□□□ -0.61
NCKIPSD-201ENST00000294129 PPDPFLQ8WWR9 84 aa11.25□□□□□ -0.61
NCKIPSD-201ENST00000294129 C16orf74Q96GX8 76 aa11.25□□□□□ -0.61
NCKIPSD-201ENST00000294129 TRBV20-1A0A075B6N2 111 aa11.24□□□□□ -0.61
NCKIPSD-201ENST00000294129 DAZ2Q13117 558 aaKnown RBP11.23□□□□□ -0.61
NCKIPSD-201ENST00000294129 DAZ4Q86SG3 579 aaKnown RBP11.23□□□□□ -0.61
NCKIPSD-201ENST00000294129 DAZ3Q9NR90 486 aaKnown RBP11.23□□□□□ -0.61
NCKIPSD-201ENST00000294129 NSD1Q96L73 2696 aaPredicted RBP11.23□□□□□ -0.61
NCKIPSD-201ENST00000294129 TRBV10-1A0A0K0K1A3 114 aa11.23□□□□□ -0.61
NCKIPSD-201ENST00000294129 ANKRD29Q8N6D5 301 aa11.23□□□□□ -0.61
NCKIPSD-201ENST00000294129 Q9H8V8 135 aa11.23□□□□□ -0.61
NCKIPSD-201ENST00000294129 GAGE6Q13070 117 aa11.22□□□□□ -0.61
NCKIPSD-201ENST00000294129 SPATA3Q8NHX4 192 aa11.22□□□□□ -0.61
NCKIPSD-201ENST00000294129 LY6G6DO95868 133 aa11.22□□□□□ -0.61
NCKIPSD-201ENST00000294129 ZFAND6Q6FIF0 208 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms