RNA–Protein interactions for RNA: ENST00000293889.10

CCDC78-201, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC78, Length 1,611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-201ENST00000293889 GAGE4Q13068 117 aa12.4□□□□□ -0.42
CCDC78-201ENST00000293889 GAGE5Q13069 117 aa12.4□□□□□ -0.42
CCDC78-201ENST00000293889 GAGE13Q4V321 117 aa12.4□□□□□ -0.42
CCDC78-201ENST00000293889 ZNRF2Q8NHG8 242 aa12.4□□□□□ -0.42
CCDC78-201ENST00000293889 TNFRSF18Q9Y5U5 241 aa12.4□□□□□ -0.42
CCDC78-201ENST00000293889 TRBV6-5A0A0K0K1A5 114 aa12.4□□□□□ -0.42
CCDC78-201ENST00000293889 LINC01549A6NIU2 74 aa12.4□□□□□ -0.42
CCDC78-201ENST00000293889 TAL2Q16559 108 aa12.4□□□□□ -0.42
CCDC78-201ENST00000293889 DNAJC30Q96LL9 226 aa12.4□□□□□ -0.42
CCDC78-201ENST00000293889 TM2D2Q9BX73 214 aa12.4□□□□□ -0.42
CCDC78-201ENST00000293889 MRPL35Q9NZE8 188 aaKnown RBP12.4□□□□□ -0.42
CCDC78-201ENST00000293889 TRBV7-3A0A075B6L6 115 aa12.39□□□□□ -0.43
CCDC78-201ENST00000293889 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.39□□□□□ -0.43
CCDC78-201ENST00000293889 RPL36AP83881 106 aaKnown RBP12.39□□□□□ -0.43
CCDC78-201ENST00000293889 ZC2HC1BQ5TFG8 222 aa12.39□□□□□ -0.43
CCDC78-201ENST00000293889 ZFAND6Q6FIF0 208 aa12.39□□□□□ -0.43
CCDC78-201ENST00000293889 RPL36ALQ969Q0 106 aaKnown RBP12.39□□□□□ -0.43
CCDC78-201ENST00000293889 F8VRH5 84 aa12.38□□□□□ -0.43
CCDC78-201ENST00000293889 H3BNG1 76 aa12.38□□□□□ -0.43
CCDC78-201ENST00000293889 GTF2H5Q6ZYL4 71 aa12.38□□□□□ -0.43
CCDC78-201ENST00000293889 LINC00694P0DN24 101 aa12.37□□□□□ -0.43
CCDC78-201ENST00000293889 TRBV25-1A0A075B6N4 114 aa12.37□□□□□ -0.43
CCDC78-201ENST00000293889 SDHAF1A6NFY7 115 aa12.37□□□□□ -0.43
CCDC78-201ENST00000293889 C3orf84H3BNL1 204 aa12.37□□□□□ -0.43
CCDC78-201ENST00000293889 K7EP34 96 aa12.37□□□□□ -0.43
CCDC78-201ENST00000293889 UBE2D3P61077 147 aa12.37□□□□□ -0.43
CCDC78-201ENST00000293889 UBE2D2P62837 147 aa12.37□□□□□ -0.43
CCDC78-201ENST00000293889 CHAC1Q9BUX1 264 aa12.37□□□□□ -0.43
CCDC78-201ENST00000293889 CST9LQ9H4G1 147 aa12.37□□□□□ -0.43
CCDC78-201ENST00000293889 GAGE10A6NGK3 116 aa12.36□□□□□ -0.43
CCDC78-201ENST00000293889 POLR2KP53803 58 aaKnown RBP12.36□□□□□ -0.43
CCDC78-201ENST00000293889 CASC10Q5T4H9 136 aa12.36□□□□□ -0.43
CCDC78-201ENST00000293889 CEMP1Q6PRD7 247 aaPredicted RBP12.36□□□□□ -0.43
CCDC78-201ENST00000293889 NEGR1Q7Z3B1 354 aa12.36□□□□□ -0.43
CCDC78-201ENST00000293889 ERASQ7Z444 233 aa12.36□□□□□ -0.43
CCDC78-201ENST00000293889 ICOSQ9Y6W8 199 aa12.36□□□□□ -0.43
CCDC78-201ENST00000293889 STARD9Q9P2P6 4700 aa12.36□□□□□ -0.43
CCDC78-201ENST00000293889 A0A096LPF7 62 aa12.35□□□□□ -0.43
CCDC78-201ENST00000293889 IGLL5B9A064 214 aa12.35□□□□□ -0.43
CCDC78-201ENST00000293889 MRPL23Q16540 153 aaKnown RBP12.35□□□□□ -0.43
CCDC78-201ENST00000293889 DYNC2H1Q8NCM8 4307 aaKnown RBP12.34□□□□□ -0.43
CCDC78-201ENST00000293889 TENM2Q9NT68 2774 aa12.34□□□□□ -0.43
CCDC78-201ENST00000293889 IGHV3-38A0A0C4DH36 116 aa12.34□□□□□ -0.43
CCDC78-201ENST00000293889 SMIM13P0DJ93 91 aa12.34□□□□□ -0.43
CCDC78-201ENST00000293889 SCGB3A1Q96QR1 104 aa12.34□□□□□ -0.43
CCDC78-201ENST00000293889 TRBV27A0A0K0K1C4 114 aa12.33□□□□□ -0.43
CCDC78-201ENST00000293889 OR5A1Q8NGJ0 315 aa12.33□□□□□ -0.43
CCDC78-201ENST00000293889 DEFB104AQ8WTQ1 72 aa12.33□□□□□ -0.43
CCDC78-201ENST00000293889 A0A1W2PPM0 123 aa12.33□□□□□ -0.44
CCDC78-201ENST00000293889 NUPR2A6NF83 97 aa12.33□□□□□ -0.44
CCDC78-201ENST00000293889 VCYO14598 125 aa12.33□□□□□ -0.44
CCDC78-201ENST00000293889 OCIAD2Q56VL3 154 aa12.33□□□□□ -0.44
CCDC78-201ENST00000293889 DAZ4Q86SG3 579 aaKnown RBP12.33□□□□□ -0.44
CCDC78-201ENST00000293889 CEND1Q8N111 149 aa12.33□□□□□ -0.44
CCDC78-201ENST00000293889 ATP6V0E2Q8NHE4 81 aa12.33□□□□□ -0.44
CCDC78-201ENST00000293889 DAZ3Q9NR90 486 aaKnown RBP12.33□□□□□ -0.44
CCDC78-201ENST00000293889 CHTOPQ9Y3Y2 248 aaKnown RBP12.33□□□□□ -0.44
CCDC78-201ENST00000293889 H3BUT2 72 aa12.32□□□□□ -0.44
CCDC78-201ENST00000293889 FXYD2P54710 66 aa12.32□□□□□ -0.44
CCDC78-201ENST00000293889 C2orf66Q6UXQ4 117 aa12.32□□□□□ -0.44
CCDC78-201ENST00000293889 I3L3M4 83 aa12.31□□□□□ -0.44
CCDC78-201ENST00000293889 TCTAP57738 103 aa12.31□□□□□ -0.44
CCDC78-201ENST00000293889 MAPKAPK5-AS1Q8N8E1 139 aa12.31□□□□□ -0.44
CCDC78-201ENST00000293889 C15orf53Q8NAA6 179 aa12.31□□□□□ -0.44
CCDC78-201ENST00000293889 BAALCQ8WXS3 180 aa12.31□□□□□ -0.44
CCDC78-201ENST00000293889 SH2D6Q7Z4S9 175 aa12.3□□□□□ -0.44
CCDC78-201ENST00000293889 TSHBP01222 138 aa12.29□□□□□ -0.44
CCDC78-201ENST00000293889 TTTY13Q9BZ97 58 aa12.29□□□□□ -0.44
CCDC78-201ENST00000293889 KLK5Q9Y337 293 aaPredicted RBP12.29□□□□□ -0.44
CCDC78-201ENST00000293889 E9PLD3 99 aa12.29□□□□□ -0.44
CCDC78-201ENST00000293889 GCSHP23434 173 aa12.29□□□□□ -0.44
CCDC78-201ENST00000293889 KIR2DL4Q99706 377 aa12.29□□□□□ -0.44
CCDC78-201ENST00000293889 GTSF1LQ9H1H1 148 aa12.29□□□□□ -0.44
CCDC78-201ENST00000293889 A0A1B0GWB2 263 aa12.28□□□□□ -0.44
CCDC78-201ENST00000293889 PAPPA-AS1Q5QFB9 102 aa12.28□□□□□ -0.44
CCDC78-201ENST00000293889 NTM-AS1Q6ZSK4 140 aa12.28□□□□□ -0.44
CCDC78-201ENST00000293889 TMEM141Q96I45 108 aa12.28□□□□□ -0.44
CCDC78-201ENST00000293889 APLNQ9ULZ1 77 aa12.28□□□□□ -0.44
CCDC78-201ENST00000293889 MYMXA0A1B0GTQ4 84 aa12.27□□□□□ -0.44
CCDC78-201ENST00000293889 PRSS29PA6NIE9 313 aa12.27□□□□□ -0.44
CCDC78-201ENST00000293889 FABP2P12104 132 aa12.27□□□□□ -0.44
CCDC78-201ENST00000293889 COTL1Q14019 142 aa12.27□□□□□ -0.44
CCDC78-201ENST00000293889 LYPD5Q6UWN5 251 aa12.27□□□□□ -0.44
CCDC78-201ENST00000293889 CYSLTR1Q9Y271 337 aa12.27□□□□□ -0.44
CCDC78-201ENST00000293889 IGIPA6NJ69 53 aa12.26□□□□□ -0.45
CCDC78-201ENST00000293889 K7ERU9 68 aa12.26□□□□□ -0.45
CCDC78-201ENST00000293889 TIMM17AQ99595 171 aa12.26□□□□□ -0.45
CCDC78-201ENST00000293889 SPCS1Q9Y6A9 102 aa12.26□□□□□ -0.45
CCDC78-201ENST00000293889 ESRGQ1W209 222 aa12.25□□□□□ -0.45
CCDC78-201ENST00000293889 RAB37Q96AX2 223 aa12.25□□□□□ -0.45
CCDC78-201ENST00000293889 TRBV6-8A0A0A6YYG3 113 aa12.24□□□□□ -0.45
CCDC78-201ENST00000293889 TIRAPP58753 221 aa12.23□□□□□ -0.45
CCDC78-201ENST00000293889 CHCHD7Q9BUK0 85 aa12.23□□□□□ -0.45
CCDC78-201ENST00000293889 PLECQ15149 4684 aaKnown RBP12.23□□□□□ -0.45
CCDC78-201ENST00000293889 PMVKQ15126 192 aa12.22□□□□□ -0.45
CCDC78-201ENST00000293889 IGLV4-69A0A075B6H9 119 aa12.22□□□□□ -0.45
CCDC78-201ENST00000293889 LELP1Q5T871 98 aa12.22□□□□□ -0.45
CCDC78-201ENST00000293889 NHP2Q9NX24 153 aaKnown RBP12.21□□□□□ -0.46
CCDC78-201ENST00000293889 PCP4P48539 62 aa12.2□□□□□ -0.46
CCDC78-201ENST00000293889 HIST1H4GQ99525 98 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms