RNA–Protein interactions for RNA: ENST00000286428.5

VBP1-201, Transcript of VHL binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VBP1, Length 1,686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-201ENST00000286428 TP73-AS1Q9UF72 201 aa13.37□□□□□ -0.27
VBP1-201ENST00000286428 BAHCC1Q9P281 2608 aa13.36□□□□□ -0.27
VBP1-201ENST00000286428 TRBV6-8A0A0A6YYG3 113 aa13.36□□□□□ -0.27
VBP1-201ENST00000286428 TAL2Q16559 108 aa13.36□□□□□ -0.27
VBP1-201ENST00000286428 A0A0J9YXV3 536 aa13.35□□□□□ -0.27
VBP1-201ENST00000286428 LOC100131303A0A0U1RQF7 123 aa13.35□□□□□ -0.27
VBP1-201ENST00000286428 PAX4O43316 350 aa13.35□□□□□ -0.27
VBP1-201ENST00000286428 GYPEP15421 78 aa13.35□□□□□ -0.27
VBP1-201ENST00000286428 ATP6V0E2Q8NHE4 81 aa13.35□□□□□ -0.27
VBP1-201ENST00000286428 GEMIN7Q9H840 131 aaKnown RBP13.35□□□□□ -0.27
VBP1-201ENST00000286428 NOTCH3Q9UM47 2321 aa13.35□□□□□ -0.27
VBP1-201ENST00000286428 TMEM223A0PJW6 202 aa13.34□□□□□ -0.27
VBP1-201ENST00000286428 ZNF22P17026 224 aaPredicted RBP13.34□□□□□ -0.27
VBP1-201ENST00000286428 TIRAPP58753 221 aa13.34□□□□□ -0.27
VBP1-201ENST00000286428 Q6ZUT4 128 aa13.34□□□□□ -0.27
VBP1-201ENST00000286428 FAM104AQ969W3 186 aa13.34□□□□□ -0.27
VBP1-201ENST00000286428 PLEKHB2Q96CS7 222 aa13.34□□□□□ -0.27
VBP1-201ENST00000286428 A0A1B0GV90 55 aa13.34□□□□□ -0.27
VBP1-201ENST00000286428 A6NDN8 102 aa13.34□□□□□ -0.27
VBP1-201ENST00000286428 NIPBLQ6KC79 2804 aaeCLIP13.33□□□□□ -0.28
VBP1-201ENST00000286428 ZNF815PA8K554 130 aa13.33□□□□□ -0.28
VBP1-201ENST00000286428 H3BRM9 83 aa13.33□□□□□ -0.28
VBP1-201ENST00000286428 LEPROTO15243 131 aa13.33□□□□□ -0.28
VBP1-201ENST00000286428 LGALS3P17931 250 aaKnown RBP13.33□□□□□ -0.28
VBP1-201ENST00000286428 MAPKAPK5-AS1Q8N8E1 139 aa13.33□□□□□ -0.28
VBP1-201ENST00000286428 ORAOV1Q8WV07 137 aa13.33□□□□□ -0.28
VBP1-201ENST00000286428 UBE2D1P51668 147 aa13.32□□□□□ -0.28
VBP1-201ENST00000286428 HERVK_113P63121 156 aa13.32□□□□□ -0.28
VBP1-201ENST00000286428 SH2D6Q7Z4S9 175 aa13.32□□□□□ -0.28
VBP1-201ENST00000286428 CDC42SE2Q9NRR3 84 aa13.32□□□□□ -0.28
VBP1-201ENST00000286428 DEFB4AO15263 64 aa13.31□□□□□ -0.28
VBP1-201ENST00000286428 SCGB1D4Q6XE38 83 aa13.31□□□□□ -0.28
VBP1-201ENST00000286428 FAM19A3Q7Z5A8 133 aa13.31□□□□□ -0.28
VBP1-201ENST00000286428 TTTY13Q9BZ97 58 aa13.31□□□□□ -0.28
VBP1-201ENST00000286428 J3QQQ9 107 aa13.31□□□□□ -0.28
VBP1-201ENST00000286428 SAMD5Q5TGI4 173 aa13.31□□□□□ -0.28
VBP1-201ENST00000286428 TRAV26-1A0A087WT03 109 aa13.3□□□□□ -0.28
VBP1-201ENST00000286428 CHCHD5Q9BSY4 110 aa13.3□□□□□ -0.28
VBP1-201ENST00000286428 TENM1Q9UKZ4 2725 aa13.3□□□□□ -0.28
VBP1-201ENST00000286428 G3V4G9 280 aa13.29□□□□□ -0.28
VBP1-201ENST00000286428 RNASE13Q5GAN3 156 aaKnown RBP13.29□□□□□ -0.28
VBP1-201ENST00000286428 HIST1H4GQ99525 98 aa13.28□□□□□ -0.28
VBP1-201ENST00000286428 IGHV1-58A0A0C4DH39 117 aa13.28□□□□□ -0.28
VBP1-201ENST00000286428 F5H768 121 aa13.28□□□□□ -0.28
VBP1-201ENST00000286428 IGLV5-45A0A087WSX0 123 aa13.27□□□□□ -0.29
VBP1-201ENST00000286428 MRPL23Q16540 153 aaKnown RBP13.27□□□□□ -0.29
VBP1-201ENST00000286428 TM2D2Q9BX73 214 aa13.27□□□□□ -0.29
VBP1-201ENST00000286428 C11orf68Q9H3H3 251 aaKnown RBP13.27□□□□□ -0.29
VBP1-201ENST00000286428 GCSHP23434 173 aa13.26□□□□□ -0.29
VBP1-201ENST00000286428 CEND1Q8N111 149 aa13.26□□□□□ -0.29
VBP1-201ENST00000286428 CELA1Q9UNI1 258 aa13.26□□□□□ -0.29
VBP1-201ENST00000286428 PTTG1IPP53801 180 aa13.25□□□□□ -0.29
VBP1-201ENST00000286428 GAGE6Q13070 117 aa13.25□□□□□ -0.29
VBP1-201ENST00000286428 A0A1B0GUV1 79 aa13.24□□□□□ -0.29
VBP1-201ENST00000286428 VWFP04275 2813 aa13.24□□□□□ -0.29
VBP1-201ENST00000286428 IGHV3-30-3P0DP02 117 aa13.24□□□□□ -0.29
VBP1-201ENST00000286428 SRSF9Q13242 221 aaKnown RBP eCLIP13.24□□□□□ -0.29
VBP1-201ENST00000286428 VSIG2Q96IQ7 327 aa13.24□□□□□ -0.29
VBP1-201ENST00000286428 TRRAPQ9Y4A5 3859 aa13.23□□□□□ -0.29
VBP1-201ENST00000286428 TRAV13-1A0A0B4J241 112 aa13.23□□□□□ -0.29
VBP1-201ENST00000286428 LINC00242Q5T6M2 205 aa13.23□□□□□ -0.29
VBP1-201ENST00000286428 COX11Q9Y6N1 276 aa13.23□□□□□ -0.29
VBP1-201ENST00000286428 ICOSQ9Y6W8 199 aa13.23□□□□□ -0.29
VBP1-201ENST00000286428 A0A0J9YY99 117 aa13.22□□□□□ -0.29
VBP1-201ENST00000286428 TMEM238LA0A1B0GVL6 79 aa13.22□□□□□ -0.29
VBP1-201ENST00000286428 A6NJY4 79 aa13.22□□□□□ -0.29
VBP1-201ENST00000286428 SPANXB1Q9NS25 103 aaPredicted RBP13.22□□□□□ -0.29
VBP1-201ENST00000286428 TMEM262E9PQX1 116 aa13.21□□□□□ -0.29
VBP1-201ENST00000286428 H3BNG1 76 aa13.21□□□□□ -0.29
VBP1-201ENST00000286428 CCL25O15444 150 aa13.21□□□□□ -0.3
VBP1-201ENST00000286428 SMIM13P0DJ93 91 aa13.21□□□□□ -0.3
VBP1-201ENST00000286428 CDKN2A-AS1Q9UH64 79 aa13.21□□□□□ -0.3
VBP1-201ENST00000286428 IGHV3-64A0A075B6Q5 118 aa13.2□□□□□ -0.3
VBP1-201ENST00000286428 HTN3P15516 51 aa13.2□□□□□ -0.3
VBP1-201ENST00000286428 TSPEAR-AS2P59090 65 aa13.2□□□□□ -0.3
VBP1-201ENST00000286428 FBN1P35555 2871 aaKnown RBP13.2□□□□□ -0.3
VBP1-201ENST00000286428 TAX1BP3O14907 124 aa13.19□□□□□ -0.3
VBP1-201ENST00000286428 C12orf74Q32Q52 190 aa13.19□□□□□ -0.3
VBP1-201ENST00000286428 TMEM238C9JI98 176 aa13.18□□□□□ -0.3
VBP1-201ENST00000286428 SPINK8P0C7L1 97 aa13.18□□□□□ -0.3
VBP1-201ENST00000286428 SPATA25Q9BR10 227 aa13.18□□□□□ -0.3
VBP1-201ENST00000286428 TRAV8-3A0A0A6YYJ7 113 aa13.17□□□□□ -0.3
VBP1-201ENST00000286428 COX6A2Q02221 97 aa13.17□□□□□ -0.3
VBP1-201ENST00000286428 ZFAND6Q6FIF0 208 aa13.17□□□□□ -0.3
VBP1-201ENST00000286428 RETNQ9HD89 108 aa13.17□□□□□ -0.3
VBP1-201ENST00000286428 NDUFA12Q9UI09 145 aa13.17□□□□□ -0.3
VBP1-201ENST00000286428 IGLV4-60A0A075B6I1 120 aa13.16□□□□□ -0.3
VBP1-201ENST00000286428 A0A096LPF7 62 aa13.16□□□□□ -0.3
VBP1-201ENST00000286428 FXYD2P54710 66 aa13.16□□□□□ -0.3
VBP1-201ENST00000286428 LELP1Q5T871 98 aa13.16□□□□□ -0.3
VBP1-201ENST00000286428 RBX1P62877 108 aa13.15□□□□□ -0.3
VBP1-201ENST00000286428 SS18Q15532 418 aa13.15□□□□□ -0.3
VBP1-201ENST00000286428 IGLV5-39A0A0G2JS06 123 aa13.15□□□□□ -0.31
VBP1-201ENST00000286428 KPRPQ5T749 579 aaPredicted RBP13.15□□□□□ -0.31
VBP1-201ENST00000286428 Q6ZVH6 145 aa13.15□□□□□ -0.31
VBP1-201ENST00000286428 C9orf118A6NHY6 69 aa13.14□□□□□ -0.31
VBP1-201ENST00000286428 CIRBPQ14011 172 aaKnown RBP13.14□□□□□ -0.31
VBP1-201ENST00000286428 A0A0J9YXY3 114 aa13.13□□□□□ -0.31
VBP1-201ENST00000286428 C11orf45Q8TAV5 145 aa13.13□□□□□ -0.31
VBP1-201ENST00000286428 NHP2Q9NX24 153 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms