RNA–Protein interactions for RNA: ENST00000275954.3

TMEM47-201, Transcript of transmembrane protein 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM47, Length 4,054 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47-201ENST00000275954 Q6ZUT4 128 aa10.63□□□□□ -0.71
TMEM47-201ENST00000275954 TRBV7-3A0A075B6L6 115 aa10.63□□□□□ -0.71
TMEM47-201ENST00000275954 M0QY20 66 aa10.63□□□□□ -0.71
TMEM47-201ENST00000275954 HERVK_113P63121 156 aa10.63□□□□□ -0.71
TMEM47-201ENST00000275954 PTH2Q96A98 100 aa10.63□□□□□ -0.71
TMEM47-201ENST00000275954 CUBNO60494 3623 aa10.63□□□□□ -0.71
TMEM47-201ENST00000275954 SLC25A20O43772 301 aa10.62□□□□□ -0.71
TMEM47-201ENST00000275954 ANGP03950 147 aaKnown RBP10.62□□□□□ -0.71
TMEM47-201ENST00000275954 S100A7L2Q5SY68 101 aa10.62□□□□□ -0.71
TMEM47-201ENST00000275954 CNFNQ9BYD5 112 aa10.62□□□□□ -0.71
TMEM47-201ENST00000275954 SPANXA1Q9NS26 97 aa10.62□□□□□ -0.71
TMEM47-201ENST00000275954 KLLNB2CW77 178 aa10.62□□□□□ -0.71
TMEM47-201ENST00000275954 NTN5Q8WTR8 489 aaPredicted RBP10.61□□□□□ -0.71
TMEM47-201ENST00000275954 IGHV3-30-3P0DP02 117 aa10.61□□□□□ -0.71
TMEM47-201ENST00000275954 GYPEP15421 78 aa10.61□□□□□ -0.71
TMEM47-201ENST00000275954 K7EQD1 137 aa10.6□□□□□ -0.71
TMEM47-201ENST00000275954 LGALS9O00182 355 aa10.6□□□□□ -0.71
TMEM47-201ENST00000275954 C10orf126Q8N4M7 172 aa10.6□□□□□ -0.71
TMEM47-201ENST00000275954 GAGE2BQ13066 116 aa10.6□□□□□ -0.71
TMEM47-201ENST00000275954 DEFB135Q30KP9 77 aa10.6□□□□□ -0.71
TMEM47-201ENST00000275954 GAGE2EQ4V326 116 aa10.6□□□□□ -0.71
TMEM47-201ENST00000275954 GAGE2DQ9UEU5 116 aa10.6□□□□□ -0.71
TMEM47-201ENST00000275954 GAGE12HA6NDE8 117 aa10.59□□□□□ -0.71
TMEM47-201ENST00000275954 A8MZ25 164 aa10.59□□□□□ -0.71
TMEM47-201ENST00000275954 CRLF1O75462 422 aa10.59□□□□□ -0.71
TMEM47-201ENST00000275954 CRYGDP07320 174 aa10.59□□□□□ -0.71
TMEM47-201ENST00000275954 PPDPFLQ8WWR9 84 aa10.58□□□□□ -0.71
TMEM47-201ENST00000275954 LINC00467Q9BRT7 94 aa10.58□□□□□ -0.71
TMEM47-201ENST00000275954 DPH3Q96FX2 82 aa10.58□□□□□ -0.72
TMEM47-201ENST00000275954 HHLA3Q9XRX5 114 aa10.58□□□□□ -0.72
TMEM47-201ENST00000275954 CDKN2A-AS1Q9UH64 79 aa10.57□□□□□ -0.72
TMEM47-201ENST00000275954 IGLV4-3A0A075B6K6 122 aa10.57□□□□□ -0.72
TMEM47-201ENST00000275954 RNF152Q8N8N0 203 aa10.57□□□□□ -0.72
TMEM47-201ENST00000275954 FAM110AQ9BQ89 295 aa10.57□□□□□ -0.72
TMEM47-201ENST00000275954 POLR2KP53803 58 aaKnown RBP10.57□□□□□ -0.72
TMEM47-201ENST00000275954 ANAPC13Q9BS18 74 aa10.57□□□□□ -0.72
TMEM47-201ENST00000275954 CARD19Q96LW7 228 aa10.56□□□□□ -0.72
TMEM47-201ENST00000275954 DNAJC30Q96LL9 226 aa10.56□□□□□ -0.72
TMEM47-201ENST00000275954 IGHV4-4A0A075B6R2 117 aa10.55□□□□□ -0.72
TMEM47-201ENST00000275954 TRBV27A0A0K0K1C4 114 aa10.55□□□□□ -0.72
TMEM47-201ENST00000275954 C16orf74Q96GX8 76 aa10.55□□□□□ -0.72
TMEM47-201ENST00000275954 VSIG2Q96IQ7 327 aa10.55□□□□□ -0.72
TMEM47-201ENST00000275954 ZNF22P17026 224 aaPredicted RBP10.55□□□□□ -0.72
TMEM47-201ENST00000275954 ATP6V0E2Q8NHE4 81 aa10.55□□□□□ -0.72
TMEM47-201ENST00000275954 ODF3Q96PU9 254 aa10.55□□□□□ -0.72
TMEM47-201ENST00000275954 CFAP126Q5VTH2 177 aa10.54□□□□□ -0.72
TMEM47-201ENST00000275954 TMEM263Q8WUH6 116 aaKnown RBP10.54□□□□□ -0.72
TMEM47-201ENST00000275954 UBE2WQ96B02 151 aa10.54□□□□□ -0.72
TMEM47-201ENST00000275954 HRNRQ86YZ3 2850 aaPredicted RBP10.54□□□□□ -0.72
TMEM47-201ENST00000275954 TRAV25A0A0B4J276 109 aa10.54□□□□□ -0.72
TMEM47-201ENST00000275954 TM2D2Q9BX73 214 aa10.54□□□□□ -0.72
TMEM47-201ENST00000275954 HILS1P60008 231 aa10.54□□□□□ -0.72
TMEM47-201ENST00000275954 DAZ2Q13117 558 aaKnown RBP10.54□□□□□ -0.72
TMEM47-201ENST00000275954 ZFAND6Q6FIF0 208 aa10.54□□□□□ -0.72
TMEM47-201ENST00000275954 GAGE2AQ6NT46 116 aa10.54□□□□□ -0.72
TMEM47-201ENST00000275954 DAZ4Q86SG3 579 aaKnown RBP10.54□□□□□ -0.72
TMEM47-201ENST00000275954 DAZ3Q9NR90 486 aaKnown RBP10.54□□□□□ -0.72
TMEM47-201ENST00000275954 IGHV1-58A0A0C4DH39 117 aa10.53□□□□□ -0.72
TMEM47-201ENST00000275954 NDUFA11Q86Y39 141 aa10.53□□□□□ -0.72
TMEM47-201ENST00000275954 SLC25A29Q8N8R3 303 aa10.53□□□□□ -0.72
TMEM47-201ENST00000275954 ZFHX3Q15911 3703 aa10.53□□□□□ -0.72
TMEM47-201ENST00000275954 APOC4P55056 127 aa10.53□□□□□ -0.72
TMEM47-201ENST00000275954 COX8CQ7Z4L0 72 aa10.53□□□□□ -0.72
TMEM47-201ENST00000275954 SOCS3O14543 225 aa10.53□□□□□ -0.72
TMEM47-201ENST00000275954 TSHBP01222 138 aa10.52□□□□□ -0.73
TMEM47-201ENST00000275954 A0A0J9YXY3 114 aa10.52□□□□□ -0.73
TMEM47-201ENST00000275954 CRIP2P52943 208 aaPredicted RBP10.51□□□□□ -0.73
TMEM47-201ENST00000275954 CLEC2BQ92478 149 aa10.51□□□□□ -0.73
TMEM47-201ENST00000275954 C9orf85Q96MD7 179 aa10.51□□□□□ -0.73
TMEM47-201ENST00000275954 SVEP1Q4LDE5 3571 aa10.51□□□□□ -0.73
TMEM47-201ENST00000275954 COL27A1Q8IZC6 1860 aaPredicted RBP10.51□□□□□ -0.73
TMEM47-201ENST00000275954 RS1O15537 224 aa10.5□□□□□ -0.73
TMEM47-201ENST00000275954 NFE4Q86UQ8 179 aa10.5□□□□□ -0.73
TMEM47-201ENST00000275954 LAMTOR3Q9UHA4 124 aa10.5□□□□□ -0.73
TMEM47-201ENST00000275954 ODF3L2Q3SX64 289 aa10.49□□□□□ -0.73
TMEM47-201ENST00000275954 CELSR1Q9NYQ6 3014 aa10.49□□□□□ -0.73
TMEM47-201ENST00000275954 LOC100131303A0A0U1RQF7 123 aa10.49□□□□□ -0.73
TMEM47-201ENST00000275954 PRSS47A8MTI9 375 aa10.49□□□□□ -0.73
TMEM47-201ENST00000275954 TCL1BO95988 128 aa10.49□□□□□ -0.73
TMEM47-201ENST00000275954 SND1-IT1Q9HBX3 110 aa10.49□□□□□ -0.73
TMEM47-201ENST00000275954 TRAV4A0A0B4J268 109 aa10.48□□□□□ -0.73
TMEM47-201ENST00000275954 ANKRD29Q8N6D5 301 aa10.48□□□□□ -0.73
TMEM47-201ENST00000275954 IGLV2-18A0A075B6J9 118 aa10.48□□□□□ -0.73
TMEM47-201ENST00000275954 TRBV6-5A0A0K0K1A5 114 aa10.48□□□□□ -0.73
TMEM47-201ENST00000275954 LINC01620Q4KN68 170 aa10.48□□□□□ -0.73
TMEM47-201ENST00000275954 ICOSQ9Y6W8 199 aa10.48□□□□□ -0.73
TMEM47-201ENST00000275954 C9orf66Q5T8R8 295 aa10.48□□□□□ -0.73
TMEM47-201ENST00000275954 IGIPA6NJ69 53 aa10.48□□□□□ -0.73
TMEM47-201ENST00000275954 KMT2BQ9UMN6 2715 aaPredicted RBP10.47□□□□□ -0.73
TMEM47-201ENST00000275954 ZNF561-AS1K7EIQ3 104 aa10.47□□□□□ -0.73
TMEM47-201ENST00000275954 MIR7-3HGQ8N6C7 128 aa10.47□□□□□ -0.73
TMEM47-201ENST00000275954 TMEM223A0PJW6 202 aa10.47□□□□□ -0.73
TMEM47-201ENST00000275954 NDUFA7O95182 113 aa10.47□□□□□ -0.73
TMEM47-201ENST00000275954 ZMAT4Q9H898 229 aa10.47□□□□□ -0.73
TMEM47-201ENST00000275954 TRBV10-1A0A0K0K1A3 114 aa10.47□□□□□ -0.73
TMEM47-201ENST00000275954 TEN1Q86WV5 123 aa10.47□□□□□ -0.73
TMEM47-201ENST00000275954 ZNF580Q9UK33 172 aa10.46□□□□□ -0.73
TMEM47-201ENST00000275954 TENM4Q6N022 2769 aa10.46□□□□□ -0.73
TMEM47-201ENST00000275954 TINCRA0A1B0GVN0 87 aa10.46□□□□□ -0.74
TMEM47-201ENST00000275954 IGHV3-30P01768 117 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms