RNA–Protein interactions for RNA: ENST00000272638.13

UBXN4-201, Transcript of UBX domain protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBXN4, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-201ENST00000272638 C6orf226Q5I0X4 101 aa9.17□□□□□ -0.94
UBXN4-201ENST00000272638 TRBV7-3A0A075B6L6 115 aa9.17□□□□□ -0.94
UBXN4-201ENST00000272638 GAGE12HA6NDE8 117 aa9.17□□□□□ -0.94
UBXN4-201ENST00000272638 XCL1P47992 114 aa9.17□□□□□ -0.94
UBXN4-201ENST00000272638 LINC00315P59091 139 aa9.17□□□□□ -0.94
UBXN4-201ENST00000272638 NDUFA11Q86Y39 141 aa9.17□□□□□ -0.94
UBXN4-201ENST00000272638 LINC01006Q8NI28 216 aa9.17□□□□□ -0.94
UBXN4-201ENST00000272638 C1QTNF4Q9BXJ3 329 aa9.17□□□□□ -0.94
UBXN4-201ENST00000272638 KIF25-AS1Q9Y6Z4 181 aa9.17□□□□□ -0.94
UBXN4-201ENST00000272638 C10orf126Q8N4M7 172 aa9.17□□□□□ -0.94
UBXN4-201ENST00000272638 SETXQ7Z333 2677 aaKnown RBP9.16□□□□□ -0.94
UBXN4-201ENST00000272638 NTN5Q8WTR8 489 aaPredicted RBP9.16□□□□□ -0.94
UBXN4-201ENST00000272638 IGLV4-69A0A075B6H9 119 aa9.16□□□□□ -0.94
UBXN4-201ENST00000272638 LINC00482Q8N8I6 264 aa9.16□□□□□ -0.94
UBXN4-201ENST00000272638 SLC25A20O43772 301 aa9.16□□□□□ -0.94
UBXN4-201ENST00000272638 MORN3Q6PF18 240 aaPredicted RBP9.16□□□□□ -0.94
UBXN4-201ENST00000272638 UNC79Q9P2D8 2635 aa9.16□□□□□ -0.94
UBXN4-201ENST00000272638 CRLF1O75462 422 aa9.15□□□□□ -0.94
UBXN4-201ENST00000272638 MXRA5Q9NR99 2828 aa9.15□□□□□ -0.94
UBXN4-201ENST00000272638 K7EQD1 137 aa9.15□□□□□ -0.94
UBXN4-201ENST00000272638 TCL1BO95988 128 aa9.15□□□□□ -0.94
UBXN4-201ENST00000272638 F5H768 121 aa9.15□□□□□ -0.94
UBXN4-201ENST00000272638 MAST4O15021 2626 aa9.15□□□□□ -0.95
UBXN4-201ENST00000272638 A0A0J9YXY3 114 aa9.15□□□□□ -0.95
UBXN4-201ENST00000272638 DNAL4O96015 105 aa9.15□□□□□ -0.95
UBXN4-201ENST00000272638 DEFB135Q30KP9 77 aa9.15□□□□□ -0.95
UBXN4-201ENST00000272638 NFE4Q86UQ8 179 aa9.15□□□□□ -0.95
UBXN4-201ENST00000272638 CLEC2BQ92478 149 aa9.15□□□□□ -0.95
UBXN4-201ENST00000272638 SLC25A29Q8N8R3 303 aa9.14□□□□□ -0.95
UBXN4-201ENST00000272638 ODF3Q96PU9 254 aa9.14□□□□□ -0.95
UBXN4-201ENST00000272638 MALP21145 153 aa9.14□□□□□ -0.95
UBXN4-201ENST00000272638 SPANXA1Q9NS26 97 aa9.14□□□□□ -0.95
UBXN4-201ENST00000272638 MGAM2Q2M2H8 2515 aa9.13□□□□□ -0.95
UBXN4-201ENST00000272638 ATXN8Q156A1 80 aa9.13□□□□□ -0.95
UBXN4-201ENST00000272638 TMEM223A0PJW6 202 aa9.13□□□□□ -0.95
UBXN4-201ENST00000272638 G3V4G9 280 aa9.13□□□□□ -0.95
UBXN4-201ENST00000272638 BSNQ9UPA5 3926 aa9.13□□□□□ -0.95
UBXN4-201ENST00000272638 TRBV6-5A0A0K0K1A5 114 aa9.13□□□□□ -0.95
UBXN4-201ENST00000272638 GYPEP15421 78 aa9.13□□□□□ -0.95
UBXN4-201ENST00000272638 SNCGO76070 127 aa9.12□□□□□ -0.95
UBXN4-201ENST00000272638 VSIG2Q96IQ7 327 aa9.12□□□□□ -0.95
UBXN4-201ENST00000272638 IGHV1-58A0A0C4DH39 117 aa9.12□□□□□ -0.95
UBXN4-201ENST00000272638 UFSP1Q6NVU6 142 aa9.12□□□□□ -0.95
UBXN4-201ENST00000272638 INAFM1C9JVW0 142 aa9.11□□□□□ -0.95
UBXN4-201ENST00000272638 HERVK_113P63121 156 aa9.11□□□□□ -0.95
UBXN4-201ENST00000272638 FAM19A4Q96LR4 140 aa9.11□□□□□ -0.95
UBXN4-201ENST00000272638 TRBV20-1A0A075B6N2 111 aa9.11□□□□□ -0.95
UBXN4-201ENST00000272638 LINC00694P0DN24 101 aa9.1□□□□□ -0.95
UBXN4-201ENST00000272638 CKS1BP61024 79 aa9.1□□□□□ -0.95
UBXN4-201ENST00000272638 CRPP02741 224 aa9.1□□□□□ -0.95
UBXN4-201ENST00000272638 CFAP161Q6P656 301 aa9.1□□□□□ -0.95
UBXN4-201ENST00000272638 ANKRD29Q8N6D5 301 aa9.1□□□□□ -0.95
UBXN4-201ENST00000272638 TMEM263Q8WUH6 116 aaKnown RBP9.1□□□□□ -0.95
UBXN4-201ENST00000272638 IGHV3-30P01768 117 aa9.1□□□□□ -0.95
UBXN4-201ENST00000272638 IGHV3-30-5P0DP03 117 aa9.1□□□□□ -0.95
UBXN4-201ENST00000272638 C1orf158Q8N1D5 194 aa9.1□□□□□ -0.95
UBXN4-201ENST00000272638 PPDPFLQ8WWR9 84 aa9.1□□□□□ -0.95
UBXN4-201ENST00000272638 ANGP03950 147 aaKnown RBP9.09□□□□□ -0.95
UBXN4-201ENST00000272638 APCP25054 2843 aa9.09□□□□□ -0.95
UBXN4-201ENST00000272638 TRAV8-4A0A0B4J246 113 aa9.09□□□□□ -0.95
UBXN4-201ENST00000272638 DAD1P61803 113 aa9.09□□□□□ -0.95
UBXN4-201ENST00000272638 TTC32Q5I0X7 151 aa9.09□□□□□ -0.95
UBXN4-201ENST00000272638 CARD19Q96LW7 228 aa9.09□□□□□ -0.95
UBXN4-201ENST00000272638 SPANXB1Q9NS25 103 aaPredicted RBP9.09□□□□□ -0.95
UBXN4-201ENST00000272638 PRSS47A8MTI9 375 aa9.08□□□□□ -0.96
UBXN4-201ENST00000272638 CMC4P56277 68 aaPredicted RBP9.08□□□□□ -0.96
UBXN4-201ENST00000272638 PIK3CD-AS1Q5SR53 167 aa9.08□□□□□ -0.96
UBXN4-201ENST00000272638 LRRC75A-AS1Q8N1F1 130 aa9.08□□□□□ -0.96
UBXN4-201ENST00000272638 RS1O15537 224 aa9.08□□□□□ -0.96
UBXN4-201ENST00000272638 POM121L12Q8N7R1 296 aa9.08□□□□□ -0.96
UBXN4-201ENST00000272638 UBE2D4Q9Y2X8 147 aa9.08□□□□□ -0.96
UBXN4-201ENST00000272638 CSMD2Q7Z408 3487 aa9.07□□□□□ -0.96
UBXN4-201ENST00000272638 FOXI1Q12951 378 aa9.07□□□□□ -0.96
UBXN4-201ENST00000272638 BRI3O95415 125 aa9.07□□□□□ -0.96
UBXN4-201ENST00000272638 C16orf74Q96GX8 76 aa9.07□□□□□ -0.96
UBXN4-201ENST00000272638 DNAJC30Q96LL9 226 aa9.07□□□□□ -0.96
UBXN4-201ENST00000272638 NOTCH1P46531 2555 aa9.07□□□□□ -0.96
UBXN4-201ENST00000272638 ICOSQ9Y6W8 199 aa9.06□□□□□ -0.96
UBXN4-201ENST00000272638 COX6A2Q02221 97 aa9.06□□□□□ -0.96
UBXN4-201ENST00000272638 LINC01620Q4KN68 170 aa9.06□□□□□ -0.96
UBXN4-201ENST00000272638 RNF152Q8N8N0 203 aa9.06□□□□□ -0.96
UBXN4-201ENST00000272638 COPS9Q8WXC6 57 aa9.06□□□□□ -0.96
UBXN4-201ENST00000272638 DAZ2Q13117 558 aaKnown RBP9.06□□□□□ -0.96
UBXN4-201ENST00000272638 ADAMTSL4-AS1Q5T5F5 129 aa9.06□□□□□ -0.96
UBXN4-201ENST00000272638 DAZ4Q86SG3 579 aaKnown RBP9.06□□□□□ -0.96
UBXN4-201ENST00000272638 DAZ3Q9NR90 486 aaKnown RBP9.06□□□□□ -0.96
UBXN4-201ENST00000272638 ATP6V0E2Q8NHE4 81 aa9.05□□□□□ -0.96
UBXN4-201ENST00000272638 TRAV25A0A0B4J276 109 aa9.05□□□□□ -0.96
UBXN4-201ENST00000272638 IGHV3-33P01772 117 aa9.05□□□□□ -0.96
UBXN4-201ENST00000272638 SS18Q15532 418 aa9.05□□□□□ -0.96
UBXN4-201ENST00000272638 TEN1Q86WV5 123 aa9.05□□□□□ -0.96
UBXN4-201ENST00000272638 MIR7-3HGQ8N6C7 128 aa9.05□□□□□ -0.96
UBXN4-201ENST00000272638 UBE2WQ96B02 151 aa9.05□□□□□ -0.96
UBXN4-201ENST00000272638 TRIAP1O43715 76 aa9.04□□□□□ -0.96
UBXN4-201ENST00000272638 KLK9Q2XQG4 91 aa9.04□□□□□ -0.96
UBXN4-201ENST00000272638 CHCHD7Q9BUK0 85 aa9.04□□□□□ -0.96
UBXN4-201ENST00000272638 RPL32P62910 135 aaKnown RBP9.04□□□□□ -0.96
UBXN4-201ENST00000272638 TRAV4A0A0B4J268 109 aa9.04□□□□□ -0.96
UBXN4-201ENST00000272638 TINCRA0A1B0GVN0 87 aa9.04□□□□□ -0.96
UBXN4-201ENST00000272638 C3orf56Q8N813 242 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms