RNA–Protein interactions for RNA: ENST00000265354.5

SRF-201, Transcript of serum response factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRF, Length 4,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRF-201ENST00000265354 C5orf38Q86SI9 138 aa12.79□□□□□ -0.36
SRF-201ENST00000265354 UBL5Q9BZL1 73 aa12.79□□□□□ -0.36
SRF-201ENST00000265354 CDKN2A-AS1Q9UH64 79 aa12.79□□□□□ -0.36
SRF-201ENST00000265354 TRAV23DV6A0A075B6W5 121 aa12.78□□□□□ -0.36
SRF-201ENST00000265354 ACYP1P07311 99 aa12.78□□□□□ -0.36
SRF-201ENST00000265354 COL4A2P08572 1712 aa12.78□□□□□ -0.36
SRF-201ENST00000265354 LINC00643Q86TS7 51 aa12.78□□□□□ -0.36
SRF-201ENST00000265354 PRO3102Q9H379 93 aa12.77□□□□□ -0.37
SRF-201ENST00000265354 IGLV4-3A0A075B6K6 122 aa12.76□□□□□ -0.37
SRF-201ENST00000265354 ZZEF1O43149 2961 aa12.76□□□□□ -0.37
SRF-201ENST00000265354 TMEM258P61165 79 aa12.76□□□□□ -0.37
SRF-201ENST00000265354 IGHV4OR15-8A0A075B7B6 117 aa12.75□□□□□ -0.37
SRF-201ENST00000265354 A0A087WW49 117 aa12.75□□□□□ -0.37
SRF-201ENST00000265354 H3BT86 120 aa12.75□□□□□ -0.37
SRF-201ENST00000265354 M0QY20 66 aa12.75□□□□□ -0.37
SRF-201ENST00000265354 IGHV1-58A0A0C4DH39 117 aa12.75□□□□□ -0.37
SRF-201ENST00000265354 A0A0J9YX75 114 aa12.75□□□□□ -0.37
SRF-201ENST00000265354 NDUFC2O95298 119 aa12.75□□□□□ -0.37
SRF-201ENST00000265354 DAD1P61803 113 aa12.75□□□□□ -0.37
SRF-201ENST00000265354 MALP21145 153 aa12.74□□□□□ -0.37
SRF-201ENST00000265354 UBE2D1P51668 147 aa12.74□□□□□ -0.37
SRF-201ENST00000265354 TMEM86BQ8N661 226 aa12.74□□□□□ -0.37
SRF-201ENST00000265354 POLR2KP53803 58 aaKnown RBP12.74□□□□□ -0.37
SRF-201ENST00000265354 SPANXDQ9BXN6 97 aa12.74□□□□□ -0.37
SRF-201ENST00000265354 NOP10Q9NPE3 64 aaKnown RBP12.74□□□□□ -0.37
SRF-201ENST00000265354 GHRHP01286 108 aa12.74□□□□□ -0.37
SRF-201ENST00000265354 Q8N6K4 173 aa12.74□□□□□ -0.37
SRF-201ENST00000265354 SPANXCQ9NY87 97 aa12.74□□□□□ -0.37
SRF-201ENST00000265354 FLNBO75369 2602 aaKnown RBP12.74□□□□□ -0.37
SRF-201ENST00000265354 TMEM223A0PJW6 202 aa12.73□□□□□ -0.37
SRF-201ENST00000265354 ATP5G1P05496 136 aa12.73□□□□□ -0.37
SRF-201ENST00000265354 SMCPP49901 116 aaPredicted RBP12.73□□□□□ -0.37
SRF-201ENST00000265354 EBI3Q14213 229 aa12.73□□□□□ -0.37
SRF-201ENST00000265354 IGHG2P01859 326 aa12.73□□□□□ -0.37
SRF-201ENST00000265354 IGF2-ASQ6U949 168 aa12.73□□□□□ -0.37
SRF-201ENST00000265354 IGIPA6NJ69 53 aa12.72□□□□□ -0.37
SRF-201ENST00000265354 PIK3CD-AS1Q5SR53 167 aa12.71□□□□□ -0.37
SRF-201ENST00000265354 GPHB5Q86YW7 130 aa12.71□□□□□ -0.37
SRF-201ENST00000265354 IGLV4-69A0A075B6H9 119 aa12.71□□□□□ -0.38
SRF-201ENST00000265354 LINC00467Q9BRT7 94 aa12.71□□□□□ -0.38
SRF-201ENST00000265354 TMEM61Q8N0U2 210 aa12.7□□□□□ -0.38
SRF-201ENST00000265354 C14orf132Q9NPU4 83 aa12.7□□□□□ -0.38
SRF-201ENST00000265354 XCL1P47992 114 aa12.7□□□□□ -0.38
SRF-201ENST00000265354 VSIG2Q96IQ7 327 aa12.7□□□□□ -0.38
SRF-201ENST00000265354 TRBV27A0A0K0K1C4 114 aa12.7□□□□□ -0.38
SRF-201ENST00000265354 CRYGDP07320 174 aa12.7□□□□□ -0.38
SRF-201ENST00000265354 A0A1W2PPR1 153 aa12.69□□□□□ -0.38
SRF-201ENST00000265354 LRRC75A-AS1Q8N1F1 130 aa12.69□□□□□ -0.38
SRF-201ENST00000265354 C19orf84I3L1E1 186 aa12.69□□□□□ -0.38
SRF-201ENST00000265354 SND1-IT1Q9HBX3 110 aa12.69□□□□□ -0.38
SRF-201ENST00000265354 IGHV4-4A0A075B6R2 117 aa12.68□□□□□ -0.38
SRF-201ENST00000265354 MED14OSP0DP75 135 aa12.68□□□□□ -0.38
SRF-201ENST00000265354 C1orf195Q5TG92 126 aa12.68□□□□□ -0.38
SRF-201ENST00000265354 LRBAP50851 2863 aa12.68□□□□□ -0.38
SRF-201ENST00000265354 MIAQ16674 131 aa12.68□□□□□ -0.38
SRF-201ENST00000265354 ZFHX4Q86UP3 3567 aa12.68□□□□□ -0.38
SRF-201ENST00000265354 COX7CP15954 63 aa12.67□□□□□ -0.38
SRF-201ENST00000265354 PSMB8P28062 276 aa12.67□□□□□ -0.38
SRF-201ENST00000265354 DAZ2Q13117 558 aaKnown RBP12.67□□□□□ -0.38
SRF-201ENST00000265354 DAZ4Q86SG3 579 aaKnown RBP12.67□□□□□ -0.38
SRF-201ENST00000265354 POM121L12Q8N7R1 296 aa12.67□□□□□ -0.38
SRF-201ENST00000265354 DAZ3Q9NR90 486 aaKnown RBP12.67□□□□□ -0.38
SRF-201ENST00000265354 TSHBP01222 138 aa12.67□□□□□ -0.38
SRF-201ENST00000265354 UBE2D3P61077 147 aa12.67□□□□□ -0.38
SRF-201ENST00000265354 UBE2D2P62837 147 aa12.67□□□□□ -0.38
SRF-201ENST00000265354 MUC4Q99102 2169 aa12.67□□□□□ -0.38
SRF-201ENST00000265354 ESM1Q9NQ30 184 aa12.67□□□□□ -0.38
SRF-201ENST00000265354 TRAV25A0A0B4J276 109 aa12.67□□□□□ -0.38
SRF-201ENST00000265354 MUC3AQ02505 3323 aa12.67□□□□□ -0.38
SRF-201ENST00000265354 AKAP13Q12802 2813 aa12.67□□□□□ -0.38
SRF-201ENST00000265354 MIR7-3HGQ8N6C7 128 aa12.67□□□□□ -0.38
SRF-201ENST00000265354 LINC01619G3V211 115 aa12.66□□□□□ -0.38
SRF-201ENST00000265354 FAM236DA0A1B0GTK5 79 aa12.66□□□□□ -0.38
SRF-201ENST00000265354 LECT2O14960 151 aa12.66□□□□□ -0.38
SRF-201ENST00000265354 FAM236CP0DP71 79 aa12.66□□□□□ -0.38
SRF-201ENST00000265354 PSMG3-AS1Q96PY0 264 aa12.66□□□□□ -0.38
SRF-201ENST00000265354 PRO0461Q9UI25 63 aa12.66□□□□□ -0.38
SRF-201ENST00000265354 NBL1P41271 181 aa12.65□□□□□ -0.38
SRF-201ENST00000265354 TMEM263Q8WUH6 116 aaKnown RBP12.65□□□□□ -0.38
SRF-201ENST00000265354 IGLV10-54A0A075B6I4 117 aa12.65□□□□□ -0.38
SRF-201ENST00000265354 ADAMTSL4-AS1Q5T5F5 129 aa12.65□□□□□ -0.38
SRF-201ENST00000265354 LINC01356Q8N9X3 169 aa12.65□□□□□ -0.38
SRF-201ENST00000265354 ANKRD17O75179 2603 aaKnown RBP12.65□□□□□ -0.38
SRF-201ENST00000265354 COX8CQ7Z4L0 72 aa12.64□□□□□ -0.39
SRF-201ENST00000265354 H7C423 109 aa12.64□□□□□ -0.39
SRF-201ENST00000265354 SLPIP03973 132 aa12.64□□□□□ -0.39
SRF-201ENST00000265354 H3BUA1 57 aa12.63□□□□□ -0.39
SRF-201ENST00000265354 ELANEP08246 267 aa12.63□□□□□ -0.39
SRF-201ENST00000265354 FBXL19-AS1Q494R0 122 aa12.63□□□□□ -0.39
SRF-201ENST00000265354 TRAV13-2A0A0B4J235 113 aa12.62□□□□□ -0.39
SRF-201ENST00000265354 OVOL2Q9BRP0 275 aa12.61□□□□□ -0.39
SRF-201ENST00000265354 K7EMT4 169 aa12.61□□□□□ -0.39
SRF-201ENST00000265354 K7EQG2 157 aa12.61□□□□□ -0.39
SRF-201ENST00000265354 C11orf71Q6IPW1 123 aa12.61□□□□□ -0.39
SRF-201ENST00000265354 KLLNB2CW77 178 aa12.61□□□□□ -0.39
SRF-201ENST00000265354 A0A087WVE0 104 aa12.61□□□□□ -0.39
SRF-201ENST00000265354 TRBV30A0A0K0K1B3 111 aa12.61□□□□□ -0.39
SRF-201ENST00000265354 A6NDX4 124 aa12.61□□□□□ -0.39
SRF-201ENST00000265354 C4orf26Q17RF5 130 aa12.61□□□□□ -0.39
SRF-201ENST00000265354 USP17L23D6RBM5 183 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms