RNA–Protein interactions for RNA: ENST00000263666.8

PDZRN3-201, Transcript of PDZ domain containing ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZRN3, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-201ENST00000263666 C15orf53Q8NAA6 179 aa11.94□□□□□ -0.5
PDZRN3-201ENST00000263666 CFAP126Q5VTH2 177 aa11.93□□□□□ -0.5
PDZRN3-201ENST00000263666 PAX4O43316 350 aa11.93□□□□□ -0.5
PDZRN3-201ENST00000263666 PSMB8P28062 276 aa11.93□□□□□ -0.5
PDZRN3-201ENST00000263666 TEX15Q9BXT5 2789 aa11.92□□□□□ -0.5
PDZRN3-201ENST00000263666 XGP55808 180 aa11.92□□□□□ -0.5
PDZRN3-201ENST00000263666 LGALS9O00182 355 aa11.92□□□□□ -0.5
PDZRN3-201ENST00000263666 TMEM223A0PJW6 202 aa11.91□□□□□ -0.5
PDZRN3-201ENST00000263666 SS18L2Q9UHA2 77 aa11.91□□□□□ -0.5
PDZRN3-201ENST00000263666 IGLV1-40P01703 118 aa11.91□□□□□ -0.5
PDZRN3-201ENST00000263666 ICOSQ9Y6W8 199 aa11.91□□□□□ -0.5
PDZRN3-201ENST00000263666 IGHV3-33P01772 117 aa11.91□□□□□ -0.5
PDZRN3-201ENST00000263666 NXPH4O95158 308 aa11.91□□□□□ -0.5
PDZRN3-201ENST00000263666 ESM1Q9NQ30 184 aa11.91□□□□□ -0.5
PDZRN3-201ENST00000263666 C5orf38Q86SI9 138 aa11.9□□□□□ -0.5
PDZRN3-201ENST00000263666 TRIAP1O43715 76 aa11.9□□□□□ -0.51
PDZRN3-201ENST00000263666 Q6ZTI0 123 aa11.9□□□□□ -0.51
PDZRN3-201ENST00000263666 DNAJC9-AS1A6NH13 148 aa11.89□□□□□ -0.51
PDZRN3-201ENST00000263666 CCL24O00175 119 aa11.89□□□□□ -0.51
PDZRN3-201ENST00000263666 CRYBA4P53673 196 aa11.89□□□□□ -0.51
PDZRN3-201ENST00000263666 RNF183Q96D59 192 aa11.89□□□□□ -0.51
PDZRN3-201ENST00000263666 F8P00451 2351 aa11.89□□□□□ -0.51
PDZRN3-201ENST00000263666 ITPR3Q14573 2671 aa11.89□□□□□ -0.51
PDZRN3-201ENST00000263666 WFDC10AQ9H1F0 79 aa11.89□□□□□ -0.51
PDZRN3-201ENST00000263666 LINC00315P59091 139 aa11.88□□□□□ -0.51
PDZRN3-201ENST00000263666 GAGE2AQ6NT46 116 aa11.88□□□□□ -0.51
PDZRN3-201ENST00000263666 NBEAL2Q6ZNJ1 2754 aa11.88□□□□□ -0.51
PDZRN3-201ENST00000263666 UBE2D1P51668 147 aa11.88□□□□□ -0.51
PDZRN3-201ENST00000263666 KIF25-AS1Q9Y6Z4 181 aa11.88□□□□□ -0.51
PDZRN3-201ENST00000263666 IGHV1-58A0A0C4DH39 117 aa11.88□□□□□ -0.51
PDZRN3-201ENST00000263666 MAP6D1Q9H9H5 199 aa11.88□□□□□ -0.51
PDZRN3-201ENST00000263666 IGSF10Q6WRI0 2623 aa11.88□□□□□ -0.51
PDZRN3-201ENST00000263666 Q6ZSN1 163 aa11.87□□□□□ -0.51
PDZRN3-201ENST00000263666 CRPP02741 224 aa11.87□□□□□ -0.51
PDZRN3-201ENST00000263666 Q6YL49 198 aa11.87□□□□□ -0.51
PDZRN3-201ENST00000263666 C9orf85Q96MD7 179 aa11.87□□□□□ -0.51
PDZRN3-201ENST00000263666 SMCPP49901 116 aaPredicted RBP11.86□□□□□ -0.51
PDZRN3-201ENST00000263666 C6orf226Q5I0X4 101 aa11.86□□□□□ -0.51
PDZRN3-201ENST00000263666 INAFM1C9JVW0 142 aa11.85□□□□□ -0.51
PDZRN3-201ENST00000263666 ADAMTSL4-AS1Q5T5F5 129 aa11.85□□□□□ -0.51
PDZRN3-201ENST00000263666 GCN1Q92616 2671 aaKnown RBP11.84□□□□□ -0.51
PDZRN3-201ENST00000263666 RBMY1A1P0DJD3 496 aaKnown RBP11.84□□□□□ -0.51
PDZRN3-201ENST00000263666 RBMY1CP0DJD4 496 aa11.84□□□□□ -0.51
PDZRN3-201ENST00000263666 RBMY1FQ15415 496 aaKnown RBP11.84□□□□□ -0.51
PDZRN3-201ENST00000263666 VSIG2Q96IQ7 327 aa11.84□□□□□ -0.51
PDZRN3-201ENST00000263666 SMR3AQ99954 134 aa11.84□□□□□ -0.51
PDZRN3-201ENST00000263666 PIK3CD-AS1Q5SR53 167 aa11.84□□□□□ -0.51
PDZRN3-201ENST00000263666 CLUHP3Q96NS8 147 aa11.84□□□□□ -0.51
PDZRN3-201ENST00000263666 CITED2Q99967 270 aaPredicted RBP11.84□□□□□ -0.51
PDZRN3-201ENST00000263666 TMEM243Q9BU79 118 aa11.84□□□□□ -0.51
PDZRN3-201ENST00000263666 Q9HAA7 133 aa11.84□□□□□ -0.51
PDZRN3-201ENST00000263666 CRLF1O75462 422 aa11.84□□□□□ -0.51
PDZRN3-201ENST00000263666 POM121L12Q8N7R1 296 aa11.84□□□□□ -0.51
PDZRN3-201ENST00000263666 SPANXA1Q9NS26 97 aa11.84□□□□□ -0.51
PDZRN3-201ENST00000263666 DEFB4AO15263 64 aa11.83□□□□□ -0.52
PDZRN3-201ENST00000263666 XCL1P47992 114 aa11.83□□□□□ -0.52
PDZRN3-201ENST00000263666 TRBV6-5A0A0K0K1A5 114 aa11.82□□□□□ -0.52
PDZRN3-201ENST00000263666 NF1P21359 2839 aa11.82□□□□□ -0.52
PDZRN3-201ENST00000263666 LINC01546A6NGU7 62 aa11.81□□□□□ -0.52
PDZRN3-201ENST00000263666 LOC100131303A0A0U1RQF7 123 aa11.81□□□□□ -0.52
PDZRN3-201ENST00000263666 HERVK_113P63121 156 aa11.81□□□□□ -0.52
PDZRN3-201ENST00000263666 FBN2P35556 2912 aa11.81□□□□□ -0.52
PDZRN3-201ENST00000263666 IGLV10-54A0A075B6I4 117 aa11.81□□□□□ -0.52
PDZRN3-201ENST00000263666 SPATA25Q9BR10 227 aa11.81□□□□□ -0.52
PDZRN3-201ENST00000263666 ZNF702PQ9H963 129 aa11.81□□□□□ -0.52
PDZRN3-201ENST00000263666 TRAV4A0A0B4J268 109 aa11.81□□□□□ -0.52
PDZRN3-201ENST00000263666 CMC4P56277 68 aaPredicted RBP11.8□□□□□ -0.52
PDZRN3-201ENST00000263666 COPS9Q8WXC6 57 aa11.8□□□□□ -0.52
PDZRN3-201ENST00000263666 PRO0461Q9UI25 63 aa11.8□□□□□ -0.52
PDZRN3-201ENST00000263666 TINCRA0A1B0GVN0 87 aa11.8□□□□□ -0.52
PDZRN3-201ENST00000263666 MIAQ16674 131 aa11.8□□□□□ -0.52
PDZRN3-201ENST00000263666 TMEM263Q8WUH6 116 aaKnown RBP11.8□□□□□ -0.52
PDZRN3-201ENST00000263666 TRBV10-2A0A0K0K1G8 114 aa11.79□□□□□ -0.52
PDZRN3-201ENST00000263666 IFITM1P13164 125 aa11.79□□□□□ -0.52
PDZRN3-201ENST00000263666 UBE2D3P61077 147 aa11.79□□□□□ -0.52
PDZRN3-201ENST00000263666 UBE2D2P62837 147 aa11.79□□□□□ -0.52
PDZRN3-201ENST00000263666 SCGB1A1P11684 91 aa11.79□□□□□ -0.52
PDZRN3-201ENST00000263666 BAALC-AS2P0C853 105 aa11.78□□□□□ -0.52
PDZRN3-201ENST00000263666 DEFB114Q30KQ6 69 aa11.78□□□□□ -0.52
PDZRN3-201ENST00000263666 LY6G6DO95868 133 aa11.78□□□□□ -0.52
PDZRN3-201ENST00000263666 ATP5G1P05496 136 aa11.78□□□□□ -0.52
PDZRN3-201ENST00000263666 LINC00694P0DN24 101 aa11.78□□□□□ -0.52
PDZRN3-201ENST00000263666 RBMY1BA6NDE4 496 aaKnown RBP11.77□□□□□ -0.52
PDZRN3-201ENST00000263666 RBMY1EA6NEQ0 496 aaKnown RBP11.77□□□□□ -0.52
PDZRN3-201ENST00000263666 RBMY1DP0C7P1 496 aaKnown RBP11.77□□□□□ -0.52
PDZRN3-201ENST00000263666 DEFB121Q5J5C9 76 aa11.77□□□□□ -0.52
PDZRN3-201ENST00000263666 ATP6V0E2Q8NHE4 81 aa11.77□□□□□ -0.52
PDZRN3-201ENST00000263666 A0A0B4J2C4 111 aa11.77□□□□□ -0.53
PDZRN3-201ENST00000263666 K7EQD1 137 aa11.77□□□□□ -0.53
PDZRN3-201ENST00000263666 COX6A2Q02221 97 aa11.77□□□□□ -0.53
PDZRN3-201ENST00000263666 MIR7-3HGQ8N6C7 128 aa11.77□□□□□ -0.53
PDZRN3-201ENST00000263666 MALP21145 153 aa11.76□□□□□ -0.53
PDZRN3-201ENST00000263666 UBE2D4Q9Y2X8 147 aa11.76□□□□□ -0.53
PDZRN3-201ENST00000263666 TMEM86BQ8N661 226 aa11.76□□□□□ -0.53
PDZRN3-201ENST00000263666 CDIP1Q9H305 208 aa11.76□□□□□ -0.53
PDZRN3-201ENST00000263666 HIST1H4AP62805 103 aaKnown RBP11.75□□□□□ -0.53
PDZRN3-201ENST00000263666 CFAP161Q6P656 301 aa11.75□□□□□ -0.53
PDZRN3-201ENST00000263666 FAM19A4Q96LR4 140 aa11.75□□□□□ -0.53
PDZRN3-201ENST00000263666 SND1-IT1Q9HBX3 110 aa11.75□□□□□ -0.53
PDZRN3-201ENST00000263666 TMEM89A2RUT3 159 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms