RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 PKIAP61925 76 aa15.87■□□□□ 0.13
SMARCB1-201ENST00000263121 SMAGPQ0VAQ4 97 aa15.87■□□□□ 0.13
SMARCB1-201ENST00000263121 Q6ZUT4 128 aa15.87■□□□□ 0.13
SMARCB1-201ENST00000263121 VCX2Q9H322 139 aa15.87■□□□□ 0.13
SMARCB1-201ENST00000263121 DEFB131BA0A096LNP1 70 aa15.86■□□□□ 0.13
SMARCB1-201ENST00000263121 UBE2L6O14933 153 aa15.86■□□□□ 0.13
SMARCB1-201ENST00000263121 PRO1933Q9H354 126 aa15.86■□□□□ 0.13
SMARCB1-201ENST00000263121 IGLV4-69A0A075B6H9 119 aa15.86■□□□□ 0.13
SMARCB1-201ENST00000263121 HSBP1L1C9JCN9 74 aa15.85■□□□□ 0.13
SMARCB1-201ENST00000263121 DGAT2L7PQ6IED9 249 aa15.84■□□□□ 0.13
SMARCB1-201ENST00000263121 CHCHD5Q9BSY4 110 aa15.84■□□□□ 0.13
SMARCB1-201ENST00000263121 TSTD3H0UI37 97 aa15.83■□□□□ 0.13
SMARCB1-201ENST00000263121 GAGE6Q13070 117 aa15.83■□□□□ 0.13
SMARCB1-201ENST00000263121 RNASE13Q5GAN3 156 aaKnown RBP15.83■□□□□ 0.13
SMARCB1-201ENST00000263121 ZNF25P17030 456 aaPredicted RBP15.83■□□□□ 0.12
SMARCB1-201ENST00000263121 AMMECR1LQ6DCA0 310 aa15.83■□□□□ 0.12
SMARCB1-201ENST00000263121 TRAV10A0A0B4J240 114 aa15.82■□□□□ 0.12
SMARCB1-201ENST00000263121 STPG4Q8N801 248 aa15.82■□□□□ 0.12
SMARCB1-201ENST00000263121 OR5A1Q8NGJ0 315 aa15.82■□□□□ 0.12
SMARCB1-201ENST00000263121 PCP4L1A6NKN8 68 aa15.81■□□□□ 0.12
SMARCB1-201ENST00000263121 DEFA6Q01524 100 aa15.81■□□□□ 0.12
SMARCB1-201ENST00000263121 CDC42SE2Q9NRR3 84 aa15.81■□□□□ 0.12
SMARCB1-201ENST00000263121 C11orf86A6NJI1 115 aa15.8■□□□□ 0.12
SMARCB1-201ENST00000263121 NHLRC4P0CG21 123 aaPredicted RBP15.8■□□□□ 0.12
SMARCB1-201ENST00000263121 ANKRD39Q53RE8 183 aa15.8■□□□□ 0.12
SMARCB1-201ENST00000263121 NFE4Q86UQ8 179 aa15.8■□□□□ 0.12
SMARCB1-201ENST00000263121 TMEM101Q96IK0 257 aa15.79■□□□□ 0.12
SMARCB1-201ENST00000263121 IGLC3P0DOY3 106 aa15.79■□□□□ 0.12
SMARCB1-201ENST00000263121 TIRAPP58753 221 aa15.79■□□□□ 0.12
SMARCB1-201ENST00000263121 C2orf88Q9BSF0 95 aa15.79■□□□□ 0.12
SMARCB1-201ENST00000263121 LELP1Q5T871 98 aa15.78■□□□□ 0.12
SMARCB1-201ENST00000263121 LYPD5Q6UWN5 251 aa15.77■□□□□ 0.12
SMARCB1-201ENST00000263121 A0A0J9YXV3 536 aa15.76■□□□□ 0.11
SMARCB1-201ENST00000263121 IGLV4-60A0A075B6I1 120 aa15.76■□□□□ 0.11
SMARCB1-201ENST00000263121 UBE2D1P51668 147 aa15.76■□□□□ 0.11
SMARCB1-201ENST00000263121 CHAC1Q9BUX1 264 aa15.76■□□□□ 0.11
SMARCB1-201ENST00000263121 COL7A1Q02388 2944 aa15.75■□□□□ 0.11
SMARCB1-201ENST00000263121 A0A1B0GUV1 79 aa15.75■□□□□ 0.11
SMARCB1-201ENST00000263121 C14orf144Q96I85 54 aa15.74■□□□□ 0.11
SMARCB1-201ENST00000263121 RBX1P62877 108 aa15.73■□□□□ 0.11
SMARCB1-201ENST00000263121 MPV17L2Q567V2 206 aa15.73■□□□□ 0.11
SMARCB1-201ENST00000263121 TINCRA0A1B0GVN0 87 aa15.73■□□□□ 0.11
SMARCB1-201ENST00000263121 TMEM262E9PQX1 116 aa15.73■□□□□ 0.11
SMARCB1-201ENST00000263121 FAM19A3Q7Z5A8 133 aa15.73■□□□□ 0.11
SMARCB1-201ENST00000263121 MIEN1Q9BRT3 115 aa15.73■□□□□ 0.11
SMARCB1-201ENST00000263121 TCTAP57738 103 aa15.72■□□□□ 0.11
SMARCB1-201ENST00000263121 ZNF22P17026 224 aaPredicted RBP15.71■□□□□ 0.11
SMARCB1-201ENST00000263121 DDTP30046 118 aa15.71■□□□□ 0.11
SMARCB1-201ENST00000263121 UQCR10Q9UDW1 63 aa15.71■□□□□ 0.11
SMARCB1-201ENST00000263121 MEGF8Q7Z7M0 2845 aa15.7■□□□□ 0.1
SMARCB1-201ENST00000263121 IGKV2D-26A0A0A0MRZ7 120 aa15.7■□□□□ 0.1
SMARCB1-201ENST00000263121 TMEM170BQ5T4T1 132 aa15.7■□□□□ 0.1
SMARCB1-201ENST00000263121 C15orf53Q8NAA6 179 aa15.7■□□□□ 0.1
SMARCB1-201ENST00000263121 PRKDCP78527 4128 aaKnown RBP15.7■□□□□ 0.1
SMARCB1-201ENST00000263121 COX8AP10176 69 aa15.7■□□□□ 0.1
SMARCB1-201ENST00000263121 TRAV13-1A0A0B4J241 112 aa15.68■□□□□ 0.1
SMARCB1-201ENST00000263121 NMUP48645 174 aa15.68■□□□□ 0.1
SMARCB1-201ENST00000263121 ESRGQ1W209 222 aa15.68■□□□□ 0.1
SMARCB1-201ENST00000263121 LINC00242Q5T6M2 205 aa15.68■□□□□ 0.1
SMARCB1-201ENST00000263121 E9PLD3 99 aa15.67■□□□□ 0.1
SMARCB1-201ENST00000263121 IGLV5-45A0A087WSX0 123 aa15.67■□□□□ 0.1
SMARCB1-201ENST00000263121 TRAV8-6A0A0B4J262 113 aa15.67■□□□□ 0.1
SMARCB1-201ENST00000263121 SLC25A34Q6PIV7 304 aa15.67■□□□□ 0.1
SMARCB1-201ENST00000263121 Q8N3U1 123 aa15.67■□□□□ 0.1
SMARCB1-201ENST00000263121 TMEM223A0PJW6 202 aa15.66■□□□□ 0.1
SMARCB1-201ENST00000263121 HERVK_113P61574 105 aa15.66■□□□□ 0.1
SMARCB1-201ENST00000263121 SEC11AP67812 179 aa15.66■□□□□ 0.1
SMARCB1-201ENST00000263121 GEMIN7Q9H840 131 aaKnown RBP15.66■□□□□ 0.1
SMARCB1-201ENST00000263121 TP73-AS1Q9UF72 201 aa15.66■□□□□ 0.1
SMARCB1-201ENST00000263121 HERVK_113P63121 156 aa15.65■□□□□ 0.1
SMARCB1-201ENST00000263121 PCP2Q8IVA1 136 aa15.65■□□□□ 0.1
SMARCB1-201ENST00000263121 COX6A2Q02221 97 aa15.64■□□□□ 0.09
SMARCB1-201ENST00000263121 BOD1L2Q8IYS8 172 aa15.64■□□□□ 0.09
SMARCB1-201ENST00000263121 LINC00587B1AMM8 73 aa15.63■□□□□ 0.09
SMARCB1-201ENST00000263121 IGLL5B9A064 214 aa15.63■□□□□ 0.09
SMARCB1-201ENST00000263121 DLEU1O43261 78 aa15.63■□□□□ 0.09
SMARCB1-201ENST00000263121 LINC00469Q8N7U9 141 aa15.63■□□□□ 0.09
SMARCB1-201ENST00000263121 WFDC10BQ8IUB3 73 aa15.62■□□□□ 0.09
SMARCB1-201ENST00000263121 CDKN2A-AS1Q9UH64 79 aa15.62■□□□□ 0.09
SMARCB1-201ENST00000263121 STAB2Q8WWQ8 2551 aa15.62■□□□□ 0.09
SMARCB1-201ENST00000263121 IGKV3OR2-268A0A0C4DH90 116 aa15.61■□□□□ 0.09
SMARCB1-201ENST00000263121 LINC00959A0A1B0GUT2 108 aa15.61■□□□□ 0.09
SMARCB1-201ENST00000263121 TTTY13Q9BZ97 58 aa15.61■□□□□ 0.09
SMARCB1-201ENST00000263121 ANGP03950 147 aaKnown RBP15.6■□□□□ 0.09
SMARCB1-201ENST00000263121 LINC00269Q8N2A0 174 aa15.6■□□□□ 0.09
SMARCB1-201ENST00000263121 HNRNPA3P51991 378 aaKnown RBP15.59■□□□□ 0.09
SMARCB1-201ENST00000263121 H3BRM9 83 aa15.58■□□□□ 0.08
SMARCB1-201ENST00000263121 CLPSL2Q6UWE3 100 aa15.58■□□□□ 0.08
SMARCB1-201ENST00000263121 MAPKAPK5-AS1Q8N8E1 139 aa15.58■□□□□ 0.08
SMARCB1-201ENST00000263121 LEPROTO15243 131 aa15.57■□□□□ 0.08
SMARCB1-201ENST00000263121 TSPEAR-AS2P59090 65 aa15.57■□□□□ 0.08
SMARCB1-201ENST00000263121 REG3AQ06141 175 aa15.57■□□□□ 0.08
SMARCB1-201ENST00000263121 C2orf91Q6ZV80 131 aa15.57■□□□□ 0.08
SMARCB1-201ENST00000263121 IGHV3-64A0A075B6Q5 118 aa15.56■□□□□ 0.08
SMARCB1-201ENST00000263121 IGHV1-58A0A0C4DH39 117 aa15.56■□□□□ 0.08
SMARCB1-201ENST00000263121 CCL25O15444 150 aa15.56■□□□□ 0.08
SMARCB1-201ENST00000263121 SPINK8P0C7L1 97 aa15.56■□□□□ 0.08
SMARCB1-201ENST00000263121 PRR34Q9NV39 138 aa15.56■□□□□ 0.08
SMARCB1-201ENST00000263121 TRAV8-3A0A0A6YYJ7 113 aa15.55■□□□□ 0.08
SMARCB1-201ENST00000263121 IGHV3-30P01768 117 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 115.9 ms