RNA–Protein interactions for RNA: ENST00000261368.12

SNCAIP-202, Transcript of synuclein alpha interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCAIP, Length 3,745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-202ENST00000261368 C15orf53Q8NAA6 179 aa11.81□□□□□ -0.52
SNCAIP-202ENST00000261368 NDUFA7O95182 113 aa11.8□□□□□ -0.52
SNCAIP-202ENST00000261368 SPANXA1Q9NS26 97 aa11.8□□□□□ -0.52
SNCAIP-202ENST00000261368 RBMY1BA6NDE4 496 aaKnown RBP11.79□□□□□ -0.52
SNCAIP-202ENST00000261368 RBMY1EA6NEQ0 496 aaKnown RBP11.79□□□□□ -0.52
SNCAIP-202ENST00000261368 UBE2L6O14933 153 aa11.79□□□□□ -0.52
SNCAIP-202ENST00000261368 RBMY1DP0C7P1 496 aaKnown RBP11.79□□□□□ -0.52
SNCAIP-202ENST00000261368 DSCR9P59020 149 aa11.79□□□□□ -0.52
SNCAIP-202ENST00000261368 MRPS36P82909 103 aaKnown RBP11.79□□□□□ -0.52
SNCAIP-202ENST00000261368 MIAQ16674 131 aa11.79□□□□□ -0.52
SNCAIP-202ENST00000261368 IGSF10Q6WRI0 2623 aa11.79□□□□□ -0.52
SNCAIP-202ENST00000261368 TRBV10-2A0A0K0K1G8 114 aa11.78□□□□□ -0.52
SNCAIP-202ENST00000261368 TRAV4A0A0B4J268 109 aa11.78□□□□□ -0.52
SNCAIP-202ENST00000261368 ZNF702PQ9H963 129 aa11.78□□□□□ -0.52
SNCAIP-202ENST00000261368 MAP6D1Q9H9H5 199 aa11.78□□□□□ -0.52
SNCAIP-202ENST00000261368 UBE2D4Q9Y2X8 147 aa11.78□□□□□ -0.52
SNCAIP-202ENST00000261368 B5MCH6 92 aa11.78□□□□□ -0.52
SNCAIP-202ENST00000261368 TRGV2A0A075B6R0 118 aa11.77□□□□□ -0.53
SNCAIP-202ENST00000261368 PYGO1Q9Y3Y4 419 aa11.77□□□□□ -0.53
SNCAIP-202ENST00000261368 RPL36AP83881 106 aaKnown RBP11.77□□□□□ -0.53
SNCAIP-202ENST00000261368 RPL36ALQ969Q0 106 aaKnown RBP11.77□□□□□ -0.53
SNCAIP-202ENST00000261368 SS18L2Q9UHA2 77 aa11.77□□□□□ -0.53
SNCAIP-202ENST00000261368 TINCRA0A1B0GVN0 87 aa11.76□□□□□ -0.53
SNCAIP-202ENST00000261368 CHCHD7Q9BUK0 85 aa11.76□□□□□ -0.53
SNCAIP-202ENST00000261368 CRLF1O75462 422 aa11.76□□□□□ -0.53
SNCAIP-202ENST00000261368 HIVEP2P31629 2446 aa11.75□□□□□ -0.53
SNCAIP-202ENST00000261368 MXRA5Q9NR99 2828 aa11.75□□□□□ -0.53
SNCAIP-202ENST00000261368 TRBV30A0A0K0K1B3 111 aa11.75□□□□□ -0.53
SNCAIP-202ENST00000261368 RPL35AP18077 110 aaKnown RBP11.75□□□□□ -0.53
SNCAIP-202ENST00000261368 TMEM101Q96IK0 257 aa11.75□□□□□ -0.53
SNCAIP-202ENST00000261368 FBN2P35556 2912 aa11.75□□□□□ -0.53
SNCAIP-202ENST00000261368 CSMD2Q7Z408 3487 aa11.74□□□□□ -0.53
SNCAIP-202ENST00000261368 TMEM89A2RUT3 159 aa11.74□□□□□ -0.53
SNCAIP-202ENST00000261368 COX6A2Q02221 97 aa11.74□□□□□ -0.53
SNCAIP-202ENST00000261368 H7C423 109 aa11.73□□□□□ -0.53
SNCAIP-202ENST00000261368 C11orf68Q9H3H3 251 aaKnown RBP11.73□□□□□ -0.53
SNCAIP-202ENST00000261368 NOP10Q9NPE3 64 aaKnown RBP11.73□□□□□ -0.53
SNCAIP-202ENST00000261368 Q6ZTI0 123 aa11.73□□□□□ -0.53
SNCAIP-202ENST00000261368 GAGE7O76087 117 aa11.72□□□□□ -0.53
SNCAIP-202ENST00000261368 GAGE12FP0CL80 117 aa11.72□□□□□ -0.53
SNCAIP-202ENST00000261368 GAGE12GP0CL81 117 aa11.72□□□□□ -0.53
SNCAIP-202ENST00000261368 GAGE12IP0CL82 117 aa11.72□□□□□ -0.53
SNCAIP-202ENST00000261368 Q6YL49 198 aa11.72□□□□□ -0.53
SNCAIP-202ENST00000261368 J3QLI3 93 aa11.72□□□□□ -0.53
SNCAIP-202ENST00000261368 SBSPONQ8IVN8 264 aa11.72□□□□□ -0.53
SNCAIP-202ENST00000261368 LINC00694P0DN24 101 aa11.72□□□□□ -0.53
SNCAIP-202ENST00000261368 NF1P21359 2839 aa11.71□□□□□ -0.53
SNCAIP-202ENST00000261368 IFITM1P13164 125 aa11.71□□□□□ -0.53
SNCAIP-202ENST00000261368 HERVK_113P63121 156 aa11.71□□□□□ -0.53
SNCAIP-202ENST00000261368 Q96MF0 132 aa11.71□□□□□ -0.53
SNCAIP-202ENST00000261368 LITAFQ99732 161 aa11.71□□□□□ -0.54
SNCAIP-202ENST00000261368 DEFB114Q30KQ6 69 aa11.7□□□□□ -0.54
SNCAIP-202ENST00000261368 SPANXDQ9BXN6 97 aa11.7□□□□□ -0.54
SNCAIP-202ENST00000261368 SPANXCQ9NY87 97 aa11.7□□□□□ -0.54
SNCAIP-202ENST00000261368 LINC00158P58513 81 aa11.69□□□□□ -0.54
SNCAIP-202ENST00000261368 GAGE6Q13070 117 aa11.69□□□□□ -0.54
SNCAIP-202ENST00000261368 PIK3CD-AS1Q5SR53 167 aa11.69□□□□□ -0.54
SNCAIP-202ENST00000261368 C3orf56Q8N813 242 aa11.69□□□□□ -0.54
SNCAIP-202ENST00000261368 TRGV4A0A0C4DH28 118 aa11.69□□□□□ -0.54
SNCAIP-202ENST00000261368 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.69□□□□□ -0.54
SNCAIP-202ENST00000261368 OR13C6PQ8NH95 151 aa11.69□□□□□ -0.54
SNCAIP-202ENST00000261368 LINC00308Q8TCZ7 52 aa11.69□□□□□ -0.54
SNCAIP-202ENST00000261368 KRTAP10-9P60411 292 aa11.68□□□□□ -0.54
SNCAIP-202ENST00000261368 CHCHD5Q9BSY4 110 aa11.68□□□□□ -0.54
SNCAIP-202ENST00000261368 IGHV4-31P0DP07 118 aa11.68□□□□□ -0.54
SNCAIP-202ENST00000261368 DNAJC30Q96LL9 226 aa11.68□□□□□ -0.54
SNCAIP-202ENST00000261368 NDUFV3P56181 108 aaKnown RBP11.68□□□□□ -0.54
SNCAIP-202ENST00000261368 LINC00242Q5T6M2 205 aa11.67□□□□□ -0.54
SNCAIP-202ENST00000261368 FAM104AQ969W3 186 aa11.67□□□□□ -0.54
SNCAIP-202ENST00000261368 H3BT86 120 aa11.66□□□□□ -0.54
SNCAIP-202ENST00000261368 PFN2P35080 140 aa11.66□□□□□ -0.54
SNCAIP-202ENST00000261368 LST1O00453 97 aa11.66□□□□□ -0.54
SNCAIP-202ENST00000261368 NDUFA1O15239 70 aa11.66□□□□□ -0.54
SNCAIP-202ENST00000261368 WFDC10AQ9H1F0 79 aa11.66□□□□□ -0.54
SNCAIP-202ENST00000261368 K7EQD1 137 aa11.65□□□□□ -0.54
SNCAIP-202ENST00000261368 C11orf72Q8NBR9 251 aa11.65□□□□□ -0.54
SNCAIP-202ENST00000261368 TMEM243Q9BU79 118 aa11.65□□□□□ -0.54
SNCAIP-202ENST00000261368 FLNAP21333 2647 aaKnown RBP11.65□□□□□ -0.55
SNCAIP-202ENST00000261368 LOC100131303A0A0U1RQF7 123 aa11.64□□□□□ -0.55
SNCAIP-202ENST00000261368 RS1O15537 224 aa11.64□□□□□ -0.55
SNCAIP-202ENST00000261368 ODF3L2Q3SX64 289 aa11.64□□□□□ -0.55
SNCAIP-202ENST00000261368 COPS9Q8WXC6 57 aa11.64□□□□□ -0.55
SNCAIP-202ENST00000261368 Q9HAA7 133 aa11.64□□□□□ -0.55
SNCAIP-202ENST00000261368 DNAL4O96015 105 aa11.64□□□□□ -0.55
SNCAIP-202ENST00000261368 C4orf3Q8WVX3 66 aa11.64□□□□□ -0.55
SNCAIP-202ENST00000261368 CRPP02741 224 aa11.63□□□□□ -0.55
SNCAIP-202ENST00000261368 CCDC179H3BU77 68 aa11.63□□□□□ -0.55
SNCAIP-202ENST00000261368 BAALC-AS2P0C853 105 aa11.63□□□□□ -0.55
SNCAIP-202ENST00000261368 DEFB130BP0DP73 79 aa11.63□□□□□ -0.55
SNCAIP-202ENST00000261368 DEFB130AP0DP74 79 aa11.63□□□□□ -0.55
SNCAIP-202ENST00000261368 CCL24O00175 119 aa11.63□□□□□ -0.55
SNCAIP-202ENST00000261368 TIRAPP58753 221 aa11.63□□□□□ -0.55
SNCAIP-202ENST00000261368 GAGE2AQ6NT46 116 aa11.62□□□□□ -0.55
SNCAIP-202ENST00000261368 C5orf38Q86SI9 138 aa11.62□□□□□ -0.55
SNCAIP-202ENST00000261368 C1orf158Q8N1D5 194 aa11.62□□□□□ -0.55
SNCAIP-202ENST00000261368 Q8N2B8 174 aa11.62□□□□□ -0.55
SNCAIP-202ENST00000261368 PLA2G2AP14555 144 aa11.61□□□□□ -0.55
SNCAIP-202ENST00000261368 PAX4O43316 350 aa11.61□□□□□ -0.55
SNCAIP-202ENST00000261368 SMIM1B2RUZ4 78 aa11.61□□□□□ -0.55
SNCAIP-202ENST00000261368 RNF152Q8N8N0 203 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms