RNA–Protein interactions for RNA: ENST00000254109.9

CLUHP3-201, Transcript of clustered mitochondria homolog pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CLUHP3, Length 1,812 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLUHP3-201ENST00000254109 SPCS1Q9Y6A9 102 aa8.17□□□□□ -1.1
CLUHP3-201ENST00000254109 EGFEM1PQ0D2K5 195 aa8.16□□□□□ -1.1
CLUHP3-201ENST00000254109 ZNF479Q96JC4 524 aa8.16□□□□□ -1.1
CLUHP3-201ENST00000254109 NOP10Q9NPE3 64 aaKnown RBP8.16□□□□□ -1.1
CLUHP3-201ENST00000254109 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.15□□□□□ -1.1
CLUHP3-201ENST00000254109 IGKV2-29A2NJV5 120 aaPredicted RBP8.15□□□□□ -1.1
CLUHP3-201ENST00000254109 K7EQD1 137 aa8.15□□□□□ -1.1
CLUHP3-201ENST00000254109 MRPS36P82909 103 aaKnown RBP8.15□□□□□ -1.1
CLUHP3-201ENST00000254109 RRN3P1Q2M238 152 aa8.15□□□□□ -1.1
CLUHP3-201ENST00000254109 CEMP1Q6PRD7 247 aaPredicted RBP8.15□□□□□ -1.1
CLUHP3-201ENST00000254109 OR5A1Q8NGJ0 315 aa8.15□□□□□ -1.1
CLUHP3-201ENST00000254109 A0A0J9YY99 117 aa8.15□□□□□ -1.11
CLUHP3-201ENST00000254109 GAGE12BA1L429 117 aa8.15□□□□□ -1.11
CLUHP3-201ENST00000254109 CIDEAO60543 219 aa8.15□□□□□ -1.11
CLUHP3-201ENST00000254109 TSPEAR-AS2P59090 65 aa8.15□□□□□ -1.11
CLUHP3-201ENST00000254109 DGAT2L7PQ6IED9 249 aa8.15□□□□□ -1.11
CLUHP3-201ENST00000254109 TRGV2A0A075B6R0 118 aa8.14□□□□□ -1.11
CLUHP3-201ENST00000254109 TINCRA0A1B0GVN0 87 aa8.14□□□□□ -1.11
CLUHP3-201ENST00000254109 A0A1B0GWB2 263 aa8.14□□□□□ -1.11
CLUHP3-201ENST00000254109 PRB2P02812 416 aaPredicted RBP8.14□□□□□ -1.11
CLUHP3-201ENST00000254109 DAZ4Q86SG3 579 aaKnown RBP8.14□□□□□ -1.11
CLUHP3-201ENST00000254109 DAZ3Q9NR90 486 aaKnown RBP8.14□□□□□ -1.11
CLUHP3-201ENST00000254109 SPANXB1Q9NS25 103 aaPredicted RBP8.14□□□□□ -1.11
CLUHP3-201ENST00000254109 IGLL5B9A064 214 aa8.13□□□□□ -1.11
CLUHP3-201ENST00000254109 SLC25A29Q8N8R3 303 aa8.13□□□□□ -1.11
CLUHP3-201ENST00000254109 CSNK1G2-AS1Q8NCQ2 148 aa8.13□□□□□ -1.11
CLUHP3-201ENST00000254109 FAM104AQ969W3 186 aa8.13□□□□□ -1.11
CLUHP3-201ENST00000254109 TIMM21Q9BVV7 248 aa8.13□□□□□ -1.11
CLUHP3-201ENST00000254109 NACAE9PAV3 2078 aa8.13□□□□□ -1.11
CLUHP3-201ENST00000254109 IGHV3-64A0A075B6Q5 118 aa8.13□□□□□ -1.11
CLUHP3-201ENST00000254109 GAGE7O76087 117 aa8.13□□□□□ -1.11
CLUHP3-201ENST00000254109 GAGE12FP0CL80 117 aa8.13□□□□□ -1.11
CLUHP3-201ENST00000254109 GAGE12GP0CL81 117 aa8.13□□□□□ -1.11
CLUHP3-201ENST00000254109 GAGE12IP0CL82 117 aa8.13□□□□□ -1.11
CLUHP3-201ENST00000254109 SMAGPQ0VAQ4 97 aa8.13□□□□□ -1.11
CLUHP3-201ENST00000254109 RNASE13Q5GAN3 156 aaKnown RBP8.13□□□□□ -1.11
CLUHP3-201ENST00000254109 Q6ZUT4 128 aa8.13□□□□□ -1.11
CLUHP3-201ENST00000254109 OVOL2Q9BRP0 275 aa8.13□□□□□ -1.11
CLUHP3-201ENST00000254109 MGAM2Q2M2H8 2515 aa8.12□□□□□ -1.11
CLUHP3-201ENST00000254109 PLAC8L1A1L4L8 177 aa8.12□□□□□ -1.11
CLUHP3-201ENST00000254109 GEMIN7Q9H840 131 aaKnown RBP8.12□□□□□ -1.11
CLUHP3-201ENST00000254109 NOTCH1P46531 2555 aa8.11□□□□□ -1.11
CLUHP3-201ENST00000254109 GAGE12JA6NER3 117 aa8.11□□□□□ -1.11
CLUHP3-201ENST00000254109 PCP4P48539 62 aa8.11□□□□□ -1.11
CLUHP3-201ENST00000254109 UBE2D3P61077 147 aa8.11□□□□□ -1.11
CLUHP3-201ENST00000254109 UBE2D2P62837 147 aa8.11□□□□□ -1.11
CLUHP3-201ENST00000254109 GAGE4Q13068 117 aa8.11□□□□□ -1.11
CLUHP3-201ENST00000254109 GAGE5Q13069 117 aa8.11□□□□□ -1.11
CLUHP3-201ENST00000254109 GAGE13Q4V321 117 aa8.11□□□□□ -1.11
CLUHP3-201ENST00000254109 TRGV4A0A0C4DH28 118 aa8.1□□□□□ -1.11
CLUHP3-201ENST00000254109 IGHV1-58A0A0C4DH39 117 aa8.1□□□□□ -1.11
CLUHP3-201ENST00000254109 IGHV3-30-3P0DP02 117 aa8.1□□□□□ -1.11
CLUHP3-201ENST00000254109 TRBV6-4A0A1B0GX49 114 aa8.1□□□□□ -1.11
CLUHP3-201ENST00000254109 IGHV3-30P01768 117 aa8.1□□□□□ -1.11
CLUHP3-201ENST00000254109 IGHV3-30-5P0DP03 117 aa8.1□□□□□ -1.11
CLUHP3-201ENST00000254109 IGHV4-30-4P0DP06 118 aa8.1□□□□□ -1.11
CLUHP3-201ENST00000254109 UBE2D1P51668 147 aa8.1□□□□□ -1.11
CLUHP3-201ENST00000254109 TMEM238C9JI98 176 aa8.09□□□□□ -1.11
CLUHP3-201ENST00000254109 TIRAPP58753 221 aa8.09□□□□□ -1.11
CLUHP3-201ENST00000254109 KPRPQ5T749 579 aaPredicted RBP8.09□□□□□ -1.11
CLUHP3-201ENST00000254109 GTSF1LQ9H1H1 148 aa8.09□□□□□ -1.11
CLUHP3-201ENST00000254109 CSDC2Q9Y534 153 aaKnown RBP8.09□□□□□ -1.11
CLUHP3-201ENST00000254109 UBE2L6O14933 153 aa8.08□□□□□ -1.12
CLUHP3-201ENST00000254109 C21orf62-AS1Q17RA5 79 aa8.08□□□□□ -1.12
CLUHP3-201ENST00000254109 PGPEP1Q9NXJ5 209 aa8.08□□□□□ -1.12
CLUHP3-201ENST00000254109 APOMO95445 188 aa8.08□□□□□ -1.12
CLUHP3-201ENST00000254109 OCIAD2Q56VL3 154 aa8.08□□□□□ -1.12
CLUHP3-201ENST00000254109 NTM-AS1Q6ZSK4 140 aa8.08□□□□□ -1.12
CLUHP3-201ENST00000254109 VSIG2Q96IQ7 327 aa8.08□□□□□ -1.12
CLUHP3-201ENST00000254109 NBEAL1Q6ZS30 2694 aa8.07□□□□□ -1.12
CLUHP3-201ENST00000254109 TRAV8-3A0A0A6YYJ7 113 aa8.07□□□□□ -1.12
CLUHP3-201ENST00000254109 A0A0J9YXY3 114 aa8.07□□□□□ -1.12
CLUHP3-201ENST00000254109 SPINK8P0C7L1 97 aa8.07□□□□□ -1.12
CLUHP3-201ENST00000254109 HERVK_113P63121 156 aa8.07□□□□□ -1.12
CLUHP3-201ENST00000254109 RPL24P83731 157 aaKnown RBP8.07□□□□□ -1.12
CLUHP3-201ENST00000254109 TMEM101Q96IK0 257 aa8.07□□□□□ -1.12
CLUHP3-201ENST00000254109 TMEM243Q9BU79 118 aa8.07□□□□□ -1.12
CLUHP3-201ENST00000254109 K7EIL1 84 aa8.06□□□□□ -1.12
CLUHP3-201ENST00000254109 K7ERU9 68 aa8.06□□□□□ -1.12
CLUHP3-201ENST00000254109 LINC00694P0DN24 101 aa8.06□□□□□ -1.12
CLUHP3-201ENST00000254109 NDUFA12Q9UI09 145 aa8.06□□□□□ -1.12
CLUHP3-201ENST00000254109 DNAH3Q8TD57 4116 aa8.06□□□□□ -1.12
CLUHP3-201ENST00000254109 IGLV5-45A0A087WSX0 123 aa8.06□□□□□ -1.12
CLUHP3-201ENST00000254109 SMIM9A6NGZ8 99 aa8.06□□□□□ -1.12
CLUHP3-201ENST00000254109 H7C423 109 aa8.06□□□□□ -1.12
CLUHP3-201ENST00000254109 LYRM7Q5U5X0 104 aa8.06□□□□□ -1.12
CLUHP3-201ENST00000254109 SBSPONQ8IVN8 264 aa8.06□□□□□ -1.12
CLUHP3-201ENST00000254109 C10orf126Q8N4M7 172 aa8.06□□□□□ -1.12
CLUHP3-201ENST00000254109 KIR2DL5BQ8NHK3 375 aa8.06□□□□□ -1.12
CLUHP3-201ENST00000254109 CFC1BP0CG36 223 aa8.05□□□□□ -1.12
CLUHP3-201ENST00000254109 CFC1P0CG37 223 aa8.05□□□□□ -1.12
CLUHP3-201ENST00000254109 FHL2Q14192 279 aa8.05□□□□□ -1.12
CLUHP3-201ENST00000254109 CDKN2A-AS1Q9UH64 79 aa8.05□□□□□ -1.12
CLUHP3-201ENST00000254109 F8W1H4 67 aa8.04□□□□□ -1.12
CLUHP3-201ENST00000254109 TSPAN13O95857 204 aa8.04□□□□□ -1.12
CLUHP3-201ENST00000254109 ZFAND6Q6FIF0 208 aa8.04□□□□□ -1.12
CLUHP3-201ENST00000254109 FAM19A3Q7Z5A8 133 aa8.04□□□□□ -1.12
CLUHP3-201ENST00000254109 MUSTN1Q8IVN3 82 aa8.04□□□□□ -1.12
CLUHP3-201ENST00000254109 CDC42SE2Q9NRR3 84 aa8.04□□□□□ -1.12
CLUHP3-201ENST00000254109 PRO1854Q9UHT4 67 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms