RNA–Protein interactions for RNA: ENST00000244670.12

KLHDC3-201, Transcript of kelch domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene KLHDC3, Length 1,903 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC3-201ENST00000244670 GCSHP23434 173 aa12.66□□□□□ -0.38
KLHDC3-201ENST00000244670 UBE2D3P61077 147 aa12.66□□□□□ -0.38
KLHDC3-201ENST00000244670 UBE2D2P62837 147 aa12.66□□□□□ -0.38
KLHDC3-201ENST00000244670 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.65□□□□□ -0.38
KLHDC3-201ENST00000244670 IGKV2-29A2NJV5 120 aaPredicted RBP12.65□□□□□ -0.38
KLHDC3-201ENST00000244670 CEMP1Q6PRD7 247 aaPredicted RBP12.65□□□□□ -0.38
KLHDC3-201ENST00000244670 E9PLD3 99 aa12.64□□□□□ -0.39
KLHDC3-201ENST00000244670 H3BRM9 83 aa12.64□□□□□ -0.39
KLHDC3-201ENST00000244670 DAD1P61803 113 aa12.64□□□□□ -0.39
KLHDC3-201ENST00000244670 PYGO1Q9Y3Y4 419 aa12.64□□□□□ -0.39
KLHDC3-201ENST00000244670 MYMXA0A1B0GTQ4 84 aa12.64□□□□□ -0.39
KLHDC3-201ENST00000244670 PRADC1Q9BSG0 188 aa12.64□□□□□ -0.39
KLHDC3-201ENST00000244670 TENM3Q9P273 2699 aa12.63□□□□□ -0.39
KLHDC3-201ENST00000244670 AMMECR1LQ6DCA0 310 aa12.62□□□□□ -0.39
KLHDC3-201ENST00000244670 DAZ4Q86SG3 579 aaKnown RBP12.62□□□□□ -0.39
KLHDC3-201ENST00000244670 DAZ3Q9NR90 486 aaKnown RBP12.62□□□□□ -0.39
KLHDC3-201ENST00000244670 UBE2D4Q9Y2X8 147 aa12.62□□□□□ -0.39
KLHDC3-201ENST00000244670 FXYD2P54710 66 aa12.62□□□□□ -0.39
KLHDC3-201ENST00000244670 HERVK_113P61574 105 aa12.62□□□□□ -0.39
KLHDC3-201ENST00000244670 CEND1Q8N111 149 aa12.62□□□□□ -0.39
KLHDC3-201ENST00000244670 C9orf118A6NHY6 69 aa12.61□□□□□ -0.39
KLHDC3-201ENST00000244670 SPART-AS1P0CW21 52 aa12.61□□□□□ -0.39
KLHDC3-201ENST00000244670 NTM-AS1Q6ZSK4 140 aa12.61□□□□□ -0.39
KLHDC3-201ENST00000244670 RAB37Q96AX2 223 aa12.6□□□□□ -0.39
KLHDC3-201ENST00000244670 AMELXQ99217 191 aa12.6□□□□□ -0.39
KLHDC3-201ENST00000244670 VCX2Q9H322 139 aa12.6□□□□□ -0.39
KLHDC3-201ENST00000244670 K7EP13 123 aa12.6□□□□□ -0.39
KLHDC3-201ENST00000244670 CRYBA4P53673 196 aa12.6□□□□□ -0.39
KLHDC3-201ENST00000244670 TAL2Q16559 108 aa12.6□□□□□ -0.39
KLHDC3-201ENST00000244670 RNASE13Q5GAN3 156 aaKnown RBP12.6□□□□□ -0.39
KLHDC3-201ENST00000244670 TMEM170BQ5T4T1 132 aa12.6□□□□□ -0.39
KLHDC3-201ENST00000244670 NFE4Q86UQ8 179 aa12.6□□□□□ -0.39
KLHDC3-201ENST00000244670 HIST1H4GQ99525 98 aa12.6□□□□□ -0.39
KLHDC3-201ENST00000244670 SPANXA1Q9NS26 97 aa12.6□□□□□ -0.39
KLHDC3-201ENST00000244670 SMIM13P0DJ93 91 aa12.59□□□□□ -0.39
KLHDC3-201ENST00000244670 GYPEP15421 78 aa12.59□□□□□ -0.39
KLHDC3-201ENST00000244670 TM2D2Q9BX73 214 aa12.59□□□□□ -0.39
KLHDC3-201ENST00000244670 ZNF815PA8K554 130 aa12.58□□□□□ -0.39
KLHDC3-201ENST00000244670 K7EIL1 84 aa12.58□□□□□ -0.39
KLHDC3-201ENST00000244670 PRO0255Q9UI72 69 aa12.58□□□□□ -0.39
KLHDC3-201ENST00000244670 A0A0J9YXV3 536 aa12.58□□□□□ -0.4
KLHDC3-201ENST00000244670 A0A0J9YY99 117 aa12.58□□□□□ -0.4
KLHDC3-201ENST00000244670 H3BUT2 72 aa12.58□□□□□ -0.4
KLHDC3-201ENST00000244670 HTN3P15516 51 aa12.58□□□□□ -0.4
KLHDC3-201ENST00000244670 Q6ZUT4 128 aa12.58□□□□□ -0.4
KLHDC3-201ENST00000244670 SBSPONQ8IVN8 264 aa12.58□□□□□ -0.4
KLHDC3-201ENST00000244670 ATP5G1P05496 136 aa12.57□□□□□ -0.4
KLHDC3-201ENST00000244670 LINC00694P0DN24 101 aa12.57□□□□□ -0.4
KLHDC3-201ENST00000244670 PAX4O43316 350 aa12.56□□□□□ -0.4
KLHDC3-201ENST00000244670 DEFB121Q5J5C9 76 aa12.56□□□□□ -0.4
KLHDC3-201ENST00000244670 F5H768 121 aa12.56□□□□□ -0.4
KLHDC3-201ENST00000244670 SCGB1D4Q6XE38 83 aa12.56□□□□□ -0.4
KLHDC3-201ENST00000244670 NAA38Q9BRA0 125 aaKnown RBP12.56□□□□□ -0.4
KLHDC3-201ENST00000244670 NHP2Q9NX24 153 aaKnown RBP12.56□□□□□ -0.4
KLHDC3-201ENST00000244670 A0A096LPF7 62 aa12.55□□□□□ -0.4
KLHDC3-201ENST00000244670 ZNF22P17026 224 aaPredicted RBP12.55□□□□□ -0.4
KLHDC3-201ENST00000244670 MRAPQ8TCY5 172 aa12.55□□□□□ -0.4
KLHDC3-201ENST00000244670 VSIG2Q96IQ7 327 aa12.54□□□□□ -0.4
KLHDC3-201ENST00000244670 GTSF1LQ9H1H1 148 aa12.54□□□□□ -0.4
KLHDC3-201ENST00000244670 TSPEAR-AS2P59090 65 aa12.54□□□□□ -0.4
KLHDC3-201ENST00000244670 KPRPQ5T749 579 aaPredicted RBP12.54□□□□□ -0.4
KLHDC3-201ENST00000244670 TRAV26-1A0A087WT03 109 aa12.53□□□□□ -0.4
KLHDC3-201ENST00000244670 GAGE10A6NGK3 116 aa12.53□□□□□ -0.4
KLHDC3-201ENST00000244670 K7ERJ3 54 aa12.53□□□□□ -0.4
KLHDC3-201ENST00000244670 MRPS36P82909 103 aaKnown RBP12.53□□□□□ -0.4
KLHDC3-201ENST00000244670 C12orf74Q32Q52 190 aa12.53□□□□□ -0.4
KLHDC3-201ENST00000244670 TIMM21Q9BVV7 248 aa12.53□□□□□ -0.4
KLHDC3-201ENST00000244670 TMEM223A0PJW6 202 aa12.52□□□□□ -0.4
KLHDC3-201ENST00000244670 DGAT2L7PQ6IED9 249 aa12.52□□□□□ -0.4
KLHDC3-201ENST00000244670 ATP6V0E2Q8NHE4 81 aa12.52□□□□□ -0.4
KLHDC3-201ENST00000244670 PLEKHB2Q96CS7 222 aa12.52□□□□□ -0.4
KLHDC3-201ENST00000244670 TMEM243Q9BU79 118 aa12.52□□□□□ -0.4
KLHDC3-201ENST00000244670 A0A0J9YWU9 116 aa12.52□□□□□ -0.41
KLHDC3-201ENST00000244670 UBE2L6O14933 153 aa12.52□□□□□ -0.41
KLHDC3-201ENST00000244670 GTF2H5Q6ZYL4 71 aa12.52□□□□□ -0.41
KLHDC3-201ENST00000244670 TEX48A0A1B0GUV7 120 aa12.51□□□□□ -0.41
KLHDC3-201ENST00000244670 A0A1W2PPM0 123 aa12.51□□□□□ -0.41
KLHDC3-201ENST00000244670 TRBV6-8A0A0A6YYG3 113 aa12.5□□□□□ -0.41
KLHDC3-201ENST00000244670 C11orf68Q9H3H3 251 aaKnown RBP12.5□□□□□ -0.41
KLHDC3-201ENST00000244670 J3QQQ9 107 aa12.5□□□□□ -0.41
KLHDC3-201ENST00000244670 LGALS3P17931 250 aaKnown RBP12.5□□□□□ -0.41
KLHDC3-201ENST00000244670 GAGE6Q13070 117 aa12.5□□□□□ -0.41
KLHDC3-201ENST00000244670 UBE2D1P51668 147 aa12.49□□□□□ -0.41
KLHDC3-201ENST00000244670 SRSF9Q13242 221 aaKnown RBP eCLIP12.49□□□□□ -0.41
KLHDC3-201ENST00000244670 IGHV3-64A0A075B6Q5 118 aa12.49□□□□□ -0.41
KLHDC3-201ENST00000244670 K7EP34 96 aa12.49□□□□□ -0.41
KLHDC3-201ENST00000244670 FABP2P12104 132 aa12.49□□□□□ -0.41
KLHDC3-201ENST00000244670 SPATA25Q9BR10 227 aa12.49□□□□□ -0.41
KLHDC3-201ENST00000244670 CHCHD5Q9BSY4 110 aa12.49□□□□□ -0.41
KLHDC3-201ENST00000244670 CSDC2Q9Y534 153 aaKnown RBP12.49□□□□□ -0.41
KLHDC3-201ENST00000244670 HUWE1Q7Z6Z7 4374 aaKnown RBP12.48□□□□□ -0.41
KLHDC3-201ENST00000244670 TINCRA0A1B0GVN0 87 aa12.48□□□□□ -0.41
KLHDC3-201ENST00000244670 LEPROTO15243 131 aa12.48□□□□□ -0.41
KLHDC3-201ENST00000244670 Q6ZTC4 211 aa12.48□□□□□ -0.41
KLHDC3-201ENST00000244670 OR5A1Q8NGJ0 315 aa12.47□□□□□ -0.41
KLHDC3-201ENST00000244670 TM2D3Q9BRN9 247 aa12.47□□□□□ -0.41
KLHDC3-201ENST00000244670 SPCS1Q9Y6A9 102 aa12.47□□□□□ -0.41
KLHDC3-201ENST00000244670 TMEM238LA0A1B0GVL6 79 aa12.46□□□□□ -0.42
KLHDC3-201ENST00000244670 A6NJY4 79 aa12.46□□□□□ -0.42
KLHDC3-201ENST00000244670 NANOS2P60321 138 aaKnown RBP12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 108.9 ms