RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 SPINK13Q1W4C9 94 aa12.87□□□□□ -0.35
CDKN1B-201ENST00000228872 CSDC2Q9Y534 153 aaKnown RBP12.87□□□□□ -0.35
CDKN1B-201ENST00000228872 PROK1P58294 105 aa12.86□□□□□ -0.35
CDKN1B-201ENST00000228872 DAZ2Q13117 558 aaKnown RBP12.86□□□□□ -0.35
CDKN1B-201ENST00000228872 DAZ4Q86SG3 579 aaKnown RBP12.86□□□□□ -0.35
CDKN1B-201ENST00000228872 LINC00308Q8TCZ7 52 aa12.86□□□□□ -0.35
CDKN1B-201ENST00000228872 EDA2RQ9HAV5 297 aa12.86□□□□□ -0.35
CDKN1B-201ENST00000228872 DAZ3Q9NR90 486 aaKnown RBP12.86□□□□□ -0.35
CDKN1B-201ENST00000228872 UBE2D4Q9Y2X8 147 aa12.86□□□□□ -0.35
CDKN1B-201ENST00000228872 CHCHD7Q9BUK0 85 aa12.86□□□□□ -0.35
CDKN1B-201ENST00000228872 LOC107984640A0A0U1RRK4 108 aa12.85□□□□□ -0.35
CDKN1B-201ENST00000228872 C5orf38Q86SI9 138 aa12.85□□□□□ -0.35
CDKN1B-201ENST00000228872 KLK5Q9Y337 293 aaPredicted RBP12.85□□□□□ -0.35
CDKN1B-201ENST00000228872 CR1P17927 2039 aa12.85□□□□□ -0.35
CDKN1B-201ENST00000228872 K7EMT4 169 aa12.85□□□□□ -0.35
CDKN1B-201ENST00000228872 CXCL5P42830 114 aa12.85□□□□□ -0.35
CDKN1B-201ENST00000228872 PEMTQ9UBM1 199 aa12.85□□□□□ -0.35
CDKN1B-201ENST00000228872 CDKN2A-AS1Q9UH64 79 aa12.85□□□□□ -0.35
CDKN1B-201ENST00000228872 POLQO75417 2590 aa12.84□□□□□ -0.35
CDKN1B-201ENST00000228872 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.84□□□□□ -0.35
CDKN1B-201ENST00000228872 IGKV2-29A2NJV5 120 aaPredicted RBP12.84□□□□□ -0.35
CDKN1B-201ENST00000228872 J3QLI3 93 aa12.84□□□□□ -0.35
CDKN1B-201ENST00000228872 BEAN1Q3B7T3 259 aa12.84□□□□□ -0.35
CDKN1B-201ENST00000228872 CSPG4Q6UVK1 2322 aa12.84□□□□□ -0.35
CDKN1B-201ENST00000228872 CIRBPQ14011 172 aaKnown RBP12.84□□□□□ -0.35
CDKN1B-201ENST00000228872 LY6EQ16553 131 aa12.83□□□□□ -0.36
CDKN1B-201ENST00000228872 KRTAP1-3Q8IUG1 177 aa12.83□□□□□ -0.36
CDKN1B-201ENST00000228872 Q8N2B8 174 aa12.83□□□□□ -0.36
CDKN1B-201ENST00000228872 ZANQ9Y493 2812 aa12.83□□□□□ -0.36
CDKN1B-201ENST00000228872 TRACP01848 142 aa12.83□□□□□ -0.36
CDKN1B-201ENST00000228872 BAALC-AS2P0C853 105 aa12.83□□□□□ -0.36
CDKN1B-201ENST00000228872 COX7CP15954 63 aa12.83□□□□□ -0.36
CDKN1B-201ENST00000228872 C22orf24Q9Y442 160 aa12.83□□□□□ -0.36
CDKN1B-201ENST00000228872 Q9UF83 564 aa12.82□□□□□ -0.36
CDKN1B-201ENST00000228872 DOPEY2Q9Y3R5 2298 aa12.82□□□□□ -0.36
CDKN1B-201ENST00000228872 AVPP01185 164 aa12.82□□□□□ -0.36
CDKN1B-201ENST00000228872 H3BUX3 64 aa12.81□□□□□ -0.36
CDKN1B-201ENST00000228872 LINC00467Q9BRT7 94 aa12.81□□□□□ -0.36
CDKN1B-201ENST00000228872 IGLV5-45A0A087WSX0 123 aa12.81□□□□□ -0.36
CDKN1B-201ENST00000228872 J3KT08 172 aa12.81□□□□□ -0.36
CDKN1B-201ENST00000228872 IGHV4-31P0DP07 118 aa12.81□□□□□ -0.36
CDKN1B-201ENST00000228872 TIRAPP58753 221 aa12.81□□□□□ -0.36
CDKN1B-201ENST00000228872 SOSTDC1Q6X4U4 206 aa12.81□□□□□ -0.36
CDKN1B-201ENST00000228872 C2orf48Q96LS8 159 aa12.81□□□□□ -0.36
CDKN1B-201ENST00000228872 A0A1B0GX51 115 aa12.8□□□□□ -0.36
CDKN1B-201ENST00000228872 SNRPD3P62318 126 aaKnown RBP12.8□□□□□ -0.36
CDKN1B-201ENST00000228872 HIST2H2BCQ6DN03 193 aa12.8□□□□□ -0.36
CDKN1B-201ENST00000228872 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.8□□□□□ -0.36
CDKN1B-201ENST00000228872 Q9H8V8 135 aa12.8□□□□□ -0.36
CDKN1B-201ENST00000228872 PTPN13Q12923 2485 aa12.8□□□□□ -0.36
CDKN1B-201ENST00000228872 A0A0U1RRA0 63 aa12.8□□□□□ -0.36
CDKN1B-201ENST00000228872 Q96MF0 132 aa12.8□□□□□ -0.36
CDKN1B-201ENST00000228872 IGLV1-40P01703 118 aa12.79□□□□□ -0.36
CDKN1B-201ENST00000228872 ZNF625Q96I27 306 aaPredicted RBP12.79□□□□□ -0.36
CDKN1B-201ENST00000228872 KNCNA6PVL3 124 aa12.78□□□□□ -0.36
CDKN1B-201ENST00000228872 FAM222AQ5U5X8 452 aa12.78□□□□□ -0.36
CDKN1B-201ENST00000228872 Q6ZSN1 163 aa12.78□□□□□ -0.36
CDKN1B-201ENST00000228872 FAM218AQ96MZ4 157 aa12.78□□□□□ -0.36
CDKN1B-201ENST00000228872 K7EQG2 157 aa12.78□□□□□ -0.36
CDKN1B-201ENST00000228872 CRYGAP11844 174 aa12.78□□□□□ -0.36
CDKN1B-201ENST00000228872 HIST1H4AP62805 103 aaKnown RBP12.78□□□□□ -0.36
CDKN1B-201ENST00000228872 BLCAPP62952 87 aa12.78□□□□□ -0.36
CDKN1B-201ENST00000228872 MAPK1IP1LQ8NDC0 245 aa12.78□□□□□ -0.36
CDKN1B-201ENST00000228872 APCP25054 2843 aa12.78□□□□□ -0.36
CDKN1B-201ENST00000228872 NBPF19A0A087WUL8 3843 aa12.78□□□□□ -0.36
CDKN1B-201ENST00000228872 A6NDX4 124 aa12.77□□□□□ -0.36
CDKN1B-201ENST00000228872 RBMY1A1P0DJD3 496 aaKnown RBP12.77□□□□□ -0.36
CDKN1B-201ENST00000228872 RBMY1CP0DJD4 496 aa12.77□□□□□ -0.36
CDKN1B-201ENST00000228872 RBMY1FQ15415 496 aaKnown RBP12.77□□□□□ -0.36
CDKN1B-201ENST00000228872 GAGE2AQ6NT46 116 aa12.77□□□□□ -0.36
CDKN1B-201ENST00000228872 COX6A2Q02221 97 aa12.77□□□□□ -0.37
CDKN1B-201ENST00000228872 C5orf47Q569G3 176 aa12.77□□□□□ -0.37
CDKN1B-201ENST00000228872 IGLV5-39A0A0G2JS06 123 aa12.76□□□□□ -0.37
CDKN1B-201ENST00000228872 INAFM2P0DMQ5 153 aa12.76□□□□□ -0.37
CDKN1B-201ENST00000228872 FAM19A5Q7Z5A7 132 aaPredicted RBP12.76□□□□□ -0.37
CDKN1B-201ENST00000228872 HTN1P15515 57 aa12.76□□□□□ -0.37
CDKN1B-201ENST00000228872 IGHV3-38A0A0C4DH36 116 aa12.75□□□□□ -0.37
CDKN1B-201ENST00000228872 FSHBP01225 129 aa12.75□□□□□ -0.37
CDKN1B-201ENST00000228872 COPS9Q8WXC6 57 aa12.75□□□□□ -0.37
CDKN1B-201ENST00000228872 ABCA12Q86UK0 2595 aa12.75□□□□□ -0.37
CDKN1B-201ENST00000228872 ATOX1O00244 68 aa12.75□□□□□ -0.37
CDKN1B-201ENST00000228872 RNF152Q8N8N0 203 aa12.75□□□□□ -0.37
CDKN1B-201ENST00000228872 SMIM9A6NGZ8 99 aa12.75□□□□□ -0.37
CDKN1B-201ENST00000228872 CFHR3Q02985 330 aa12.74□□□□□ -0.37
CDKN1B-201ENST00000228872 hADV29S1A0JD25 119 aa12.73□□□□□ -0.37
CDKN1B-201ENST00000228872 NAV2Q8IVL1 2488 aa12.72□□□□□ -0.37
CDKN1B-201ENST00000228872 IGHV3OR16-12A0A075B7B8 117 aa12.72□□□□□ -0.37
CDKN1B-201ENST00000228872 MALP21145 153 aa12.72□□□□□ -0.37
CDKN1B-201ENST00000228872 HELZ2Q9BYK8 2649 aaKnown RBP12.72□□□□□ -0.37
CDKN1B-201ENST00000228872 Q9HAA7 133 aa12.72□□□□□ -0.37
CDKN1B-201ENST00000228872 RPS28P62857 69 aaKnown RBP12.72□□□□□ -0.37
CDKN1B-201ENST00000228872 LINC00242Q5T6M2 205 aa12.72□□□□□ -0.37
CDKN1B-201ENST00000228872 MXRA5Q9NR99 2828 aa12.71□□□□□ -0.37
CDKN1B-201ENST00000228872 PRM2P04554 102 aa12.71□□□□□ -0.38
CDKN1B-201ENST00000228872 DGAT2L7PQ6IED9 249 aa12.71□□□□□ -0.38
CDKN1B-201ENST00000228872 CYSTM1Q9H1C7 97 aa12.71□□□□□ -0.38
CDKN1B-201ENST00000228872 SMIM1B2RUZ4 78 aa12.7□□□□□ -0.38
CDKN1B-201ENST00000228872 WFDC11Q8NEX6 87 aa12.7□□□□□ -0.38
CDKN1B-201ENST00000228872 DEFB112Q30KQ8 113 aa12.7□□□□□ -0.38
CDKN1B-201ENST00000228872 PRIMA1Q86XR5 153 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms